; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011591 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011591
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr1:28546007..28551028
RNA-Seq ExpressionLag0011591
SyntenyLag0011591
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6734747.1 hypothetical protein I3842_01G285500 [Carya illinoinensis]5.0e-6532.71Show/hide
Query:  MADPNPQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT---------------------DKARD
        MA+ + +  P+ ++DY +PV  G  S I+   INANNF+LK  LI M Q   + GSP +DPN HL  FL+IC T                     DKAR 
Subjt:  MADPNPQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT---------------------DKARD

Query:  WLQSIPPGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKT
        WLQS+ PGSI +W  + +  L KFFPPAKT +LR+EI  F+Q   E L EAWERYK L+R+CPQHG PDWLQ+Q+FY  LN  T+TIVD A+GGTL+SKT
Subjt:  WLQSIPPGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKT

Query:  VENVCTLLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQTIDSAAAL-----ASQSQEETLEQLPSSTFN-RRLPSS
         E    LLE+MA+NNYQWP++R   KK+ AG+ E++ ++AL AQ++T+++     +  R  Q+ +  A+      ++++ +E ++ + +  +N R  P  
Subjt:  VENVCTLLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQTIDSAAAL-----ASQSQEETLEQLPSSTFN-RRLPSS

Query:  SFFFNDLRSSQLSS-----SVLQPSTPAEGDRALPNVFGALMALWDFCLLFFFLIFASIPLAFVVTDASDGIAGFGIVVLGRRLGNWGFGFFVELGENPV
        +++   LR+ +  S     +VLQP  P   D                                                                   P 
Subjt:  SFFFNDLRSSQLSS-----SVLQPSTPAEGDRALPNVFGALMALWDFCLLFFFLIFASIPLAFVVTDASDGIAGFGIVVLGRRLGNWGFGFFVELGENPV

Query:  EYNCFAVPRRLAVRRASLSRRSSCLALHGACRLKLFNAKSSQVTNLAHLTLTESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSVVNTINKGK
        E       +++++  A +S                               + E++ R  K +  +  I T      AT+KN+E Q+GQL + +N   +G 
Subjt:  EYNCFAVPRRLAVRRASLSRRSSCLALHGACRLKLFNAKSSQVTNLAHLTLTESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSVVNTINKGK

Query:  APTEQERSQMEYCKAITLHHEEEIQEAEEQET
         P+  E +  E CKAITL   +EI+ A  +E+
Subjt:  APTEQERSQMEYCKAITLHHEEEIQEAEEQET

KAG7947748.1 hypothetical protein I3843_14G109500 [Carya illinoinensis]5.0e-6532.71Show/hide
Query:  MADPNPQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT---------------------DKARD
        MA+ + +  P+ ++DY +PV  G  S I+   INANNF+LK  LI M Q   + GSP +DPN HL  FL+IC T                     DKAR 
Subjt:  MADPNPQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT---------------------DKARD

Query:  WLQSIPPGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKT
        WLQS+ PGSI +W  + +  L KFFPPAKT +LR+EI  F+Q   E L EAWERYK L+R+CPQHG PDWLQ+Q+FY  LN  T+TIVD A+GGTL+SKT
Subjt:  WLQSIPPGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKT

Query:  VENVCTLLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQTIDSAAAL-----ASQSQEETLEQLPSSTFN-RRLPSS
         E    LLE+MA+NNYQWP++R   KK+ AG+ E++ ++AL AQ++T+++     +  R  Q+ +  A+      ++++ +E ++ + +  +N R  P  
Subjt:  VENVCTLLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQTIDSAAAL-----ASQSQEETLEQLPSSTFN-RRLPSS

Query:  SFFFNDLRSSQLSS-----SVLQPSTPAEGDRALPNVFGALMALWDFCLLFFFLIFASIPLAFVVTDASDGIAGFGIVVLGRRLGNWGFGFFVELGENPV
        +++   LR+ +  S     +VLQP  P   D                                                                   P 
Subjt:  SFFFNDLRSSQLSS-----SVLQPSTPAEGDRALPNVFGALMALWDFCLLFFFLIFASIPLAFVVTDASDGIAGFGIVVLGRRLGNWGFGFFVELGENPV

Query:  EYNCFAVPRRLAVRRASLSRRSSCLALHGACRLKLFNAKSSQVTNLAHLTLTESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSVVNTINKGK
        E       +++++  A +S                               + E++ R  K +  +  I T      AT+KN+E Q+GQL + +N   +G 
Subjt:  EYNCFAVPRRLAVRRASLSRRSSCLALHGACRLKLFNAKSSQVTNLAHLTLTESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSVVNTINKGK

Query:  APTEQERSQMEYCKAITLHHEEEIQEAEEQET
         P+  E +  E CKAITL   +EI+ A  +E+
Subjt:  APTEQERSQMEYCKAITLHHEEEIQEAEEQET

KAG7990634.1 hypothetical protein I3843_02G035100 [Carya illinoinensis]1.5e-6432.71Show/hide
Query:  MADPNPQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT---------------------DKARD
        MA+ + +  P+ ++DY +PV  G  S I+   INANNF+LK  LI M Q   + GSP +DPN HL  FL+IC T                     DKAR 
Subjt:  MADPNPQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT---------------------DKARD

Query:  WLQSIPPGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKT
        WLQS+ PGSI +W  + +  L KFFPPAKT +LR+EI  F+Q   E L EAWERYK L+R+CPQHG PDWLQ+Q+FY  LN  T+TIVD A+GGTL+SKT
Subjt:  WLQSIPPGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKT

Query:  VENVCTLLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQTIDSAAAL-----ASQSQEETLEQLPSSTFN-RRLPSS
         E    LLE+MA+NNYQWP++R   KK+ AG+ +++ ++AL AQ++T+++     +  R  Q+ +  A+      ++++ +E ++ + +  +N R  P  
Subjt:  VENVCTLLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQTIDSAAAL-----ASQSQEETLEQLPSSTFN-RRLPSS

Query:  SFFFNDLRSSQLSS-----SVLQPSTPAEGDRALPNVFGALMALWDFCLLFFFLIFASIPLAFVVTDASDGIAGFGIVVLGRRLGNWGFGFFVELGENPV
        +++   LR+ +  S     +VLQP  P   D                                                                   P 
Subjt:  SFFFNDLRSSQLSS-----SVLQPSTPAEGDRALPNVFGALMALWDFCLLFFFLIFASIPLAFVVTDASDGIAGFGIVVLGRRLGNWGFGFFVELGENPV

Query:  EYNCFAVPRRLAVRRASLSRRSSCLALHGACRLKLFNAKSSQVTNLAHLTLTESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSVVNTINKGK
        E       R++++  A +S                               + E++ R  K +  +  I T      A IKNIE Q+GQL + +N   +G 
Subjt:  EYNCFAVPRRLAVRRASLSRRSSCLALHGACRLKLFNAKSSQVTNLAHLTLTESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSVVNTINKGK

Query:  APTEQERSQMEYCKAITLHHEEEIQEAEEQET
         P+  E +  E CKAITL   +EI+ +  +E+
Subjt:  APTEQERSQMEYCKAITLHHEEEIQEAEEQET

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]6.5e-7336.31Show/hide
Query:  LKESTPMADPNPQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT--------------------
        L ++T MA    +E PK IRDYFQP     Q GI+   IN NNF+LK GLIQMA++ A++G   EDP+ HL SFL+ICGT                    
Subjt:  LKESTPMADPNPQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT--------------------

Query:  -DKARDWLQSIPPGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGG
         D+A+DWL++IPP SITTW+ L QA L K+FPPAK+ +LRTEI TF+Q  DEQL EAWERYK LLR+CPQHGYPDWLQIQLFY  L  STK+I+D  AGG
Subjt:  -DKARDWLQSIPPGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGG

Query:  TLLSKTVENVCTLLEDMATNNYQWPSDRFTPK-KIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQT----IDSAAALASQ----SQEETLEQLPSS
        ++ SK  +   T+LED+AT +Y WP +R +P     AG++E+D V++L+AQM+++ NA  K +    AQT    I S AALAS+       ET   +   
Subjt:  TLLSKTVENVCTLLEDMATNNYQWPSDRFTPK-KIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQT----IDSAAALASQ----SQEETLEQLPSS

Query:  TF----NRRLPSSSFFFNDLRSSQLSSSVLQPSTPAEGDRALPNVFGALMALWDFCLLFFFLIFASIPLAFVVTDASDGIAGFGIVVLGRRLGNWGFGFF
         +    +++LP  + +  +LR+ +  S     +                                       V  A  G  G G                
Subjt:  TF----NRRLPSSSFFFNDLRSSQLSSSVLQPSTPAEGDRALPNVFGALMALWDFCLLFFFLIFASIPLAFVVTDASDGIAGFGIVVLGRRLGNWGFGFF

Query:  VELGENPVEYNCFAVPRRLAVRRASLSRRSSCLALHGACRLKLFNAKSSQVTNLAHLTLTESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSV
                                                    NAK+S + ++    + ES +RT  LE  V AI +TV      ++N+E QL Q+ + 
Subjt:  VELGENPVEYNCFAVPRRLAVRRASLSRRSSCLALHGACRLKLFNAKSSQVTNLAHLTLTESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSV

Query:  VNTINKGKAPTEQERSQMEYCKAITLHHEEE------IQEAEEQETTE
        + T+ KGK P+  E +  E CKA+TL   ++      I E EEQE  +
Subjt:  VNTINKGKAPTEQERSQMEYCKAITLHHEEE------IQEAEEQETTE

XP_023903214.1 uncharacterized protein LOC112015077 [Quercus suber]1.9e-6432.07Show/hide
Query:  MADPNPQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT---------------------DKARD
        MA+     +P+ ++DY +P+     SGI    INANNF+LK  LI M Q   + GSP +DPN HL  FL+IC T                     DKAR 
Subjt:  MADPNPQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT---------------------DKARD

Query:  WLQSIPPGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKT
        WLQS+ PGSIT+W  + +  L KFFPPAKT +LR+EI  F+Q   E L EAWERYK L+R CPQHG PDWLQ+Q+FY  LN  T+TIVD A+GGTL+SKT
Subjt:  WLQSIPPGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKT

Query:  VENVCTLLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQTIDSAAALA-----SQSQEETLEQLPSSTFN-RRLPSS
         E   +LLE+MA+NNYQWP++R   KK+ AG+ E++  +AL AQ++++++     S  R  Q+ +  AA +     +++ +E ++ + +  +N R  P  
Subjt:  VENVCTLLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQTIDSAAALA-----SQSQEETLEQLPSSTFN-RRLPSS

Query:  SFFFNDLRSSQLSSSVLQPSTPAEGDRALPNVFGALMALWDFCLLFFFLIFASIPLAFVVTDASDGIAGFGIVVLGRRLGNWGFGFFVELGENPVEYNCF
        +++   LR+ +                                                                     N+ +G    + + P  ++  
Subjt:  SFFFNDLRSSQLSSSVLQPSTPAEGDRALPNVFGALMALWDFCLLFFFLIFASIPLAFVVTDASDGIAGFGIVVLGRRLGNWGFGFFVELGENPVEYNCF

Query:  AVPRRLAVRRASLSRRSSCLALHGACRLKLFNAKSSQVTNLAHLTLTESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSVVNTINKGKAPTEQ
           +++++  A +S                               + E+  R  K +  +  I T      AT+KN+E Q+GQL + +N   +G  P+  
Subjt:  AVPRRLAVRRASLSRRSSCLALHGACRLKLFNAKSSQVTNLAHLTLTESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSVVNTINKGKAPTEQ

Query:  ERSQMEYCKAITLHHEEEIQEAEEQET
        E +  E CKAITL    EI+ +  +ET
Subjt:  ERSQMEYCKAITLHHEEEIQEAEEQET

TrEMBL top hitse value%identityAlignment
A0A2I4F4C8 uncharacterized protein LOC1089953732.1e-5649.39Show/hide
Query:  MADPNPQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT---------------------DKARD
        MAD      P+ ++DY +PV     SGI    INANNF+LK  LI M Q   +  SP +DPN HL  FL IC T                     DKAR 
Subjt:  MADPNPQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT---------------------DKARD

Query:  WLQSIPPGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKT
        WLQS+  GSIT+W  + +  L KFFPPAKT +LR+EI  F+Q   E L EAWERYK L+R CPQHG P+WLQ+Q+FY  LN  T+TIVD AAGGTL+SKT
Subjt:  WLQSIPPGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKT

Query:  VENVCT-LLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQ
        +E   T LLE+M +NNYQWP+++   KK+  G+    ++SAL  Q
Subjt:  VENVCT-LLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQ

A0A2I4F4C8 uncharacterized protein LOC1089953735.5e-0133.75Show/hide
Query:  ESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSVVNTINKGKAPTEQERSQMEYCKAITLHHEEEIQEAEEQET
        E++ R  K + ++  I+       A IKNIE Q+G+L +++N   +G  P+  E +  E CKAITL    E++ +  +ET
Subjt:  ESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSVVNTINKGKAPTEQERSQMEYCKAITLHHEEEIQEAEEQET

A0A2I4F4C8 uncharacterized protein LOC1089953734.6e-5648.15Show/hide
Query:  EEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCA-YKGSPTEDPNSHLNSFLDICGT---------------------DKARDWLQSIP
        E  + +RDY  P+ QG    I    INANNF++K   IQM Q    + G P++DPNSHL +FL+IC T                     DKA+ WL S+P
Subjt:  EEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCA-YKGSPTEDPNSHLNSFLDICGT---------------------DKARDWLQSIP

Query:  PGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKTVENVCT
         GSITTW+ L Q  L KFFPPAKT K+R +I +F Q   E L EAWER+K+LLR+CP HG PDWLQ+Q FY  L  S KTI+D AAGG L+SK   +   
Subjt:  PGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKTVENVCT

Query:  LLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIA
        LLE+MA+NNYQWPS+R   +K   G +EID +  L  Q++ ++
Subjt:  LLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIA

A0A6J0ZYV0 uncharacterized protein LOC1104134136.0e-5648.15Show/hide
Query:  EEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCA-YKGSPTEDPNSHLNSFLDICGT---------------------DKARDWLQSIP
        E  + +RDY  P+ QG    I    INANNF++K   IQM Q    + G P++DPNSHL +FL+IC T                     DKA+ WL S+P
Subjt:  EEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCA-YKGSPTEDPNSHLNSFLDICGT---------------------DKARDWLQSIP

Query:  PGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKTVENVCT
         GSITTW+ L Q  L KFFPPAKT K+R +I +F Q   E L EAWER+K+LLR+CP HG PDWLQ+Q FY  L  S KTI+D AAGG L+SK   +   
Subjt:  PGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKTVENVCT

Query:  LLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIA
        LLE+MA+NNYQWPS+R   +K   G +EID +  L  Q++ ++
Subjt:  LLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIA

A0A6J1DU19 uncharacterized protein LOC1110243611.1e-6033.86Show/hide
Query:  PMADPN-PQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGTDKARDWLQS-----IPPGSITTWD
        PM  P   Q     IRDY QP F     GI+   INANN +LK GLIQM ++  ++G+ TEDPN+HL  FLD+CGT K    +       + P S+   +
Subjt:  PMADPN-PQEEPKPIRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGTDKARDWLQS-----IPPGSITTWD

Query:  ALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKTVENVCTLLEDMATN
         +VQA L  FFPPAKT +LRTEI +F++   EQL E WERYK+LLRKCPQHG  +WLQIQ+FY  LN  T+TI+D AAGGTLLS+T EN   LL+DMA N
Subjt:  ALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKTVENVCTLLEDMATN

Query:  NYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQTIDSAAALASQS-QEETLEQLPSSTFNRRLPSSSFFFNDLRSSQLSSSVLQP
        ++QWPS+R   KK+ AG++EID +S+L+AQ+  + NA  K SG  ++ + +  AA  + S  E T+EQ   +                            
Subjt:  NYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQTIDSAAALASQS-QEETLEQLPSSTFNRRLPSSSFFFNDLRSSQLSSSVLQP

Query:  STPAEGDRALPNVFGALMALWDFCLLFFFLIFASIPLAFVVTDASDGIAGFGIVVLGRRLGNWGFGFFVELGENPVEYNCFAVPRRLAVRRASLSRRSSC
        S PAE   +L ++ GA                                                                                    
Subjt:  STPAEGDRALPNVFGALMALWDFCLLFFFLIFASIPLAFVVTDASDGIAGFGIVVLGRRLGNWGFGFFVELGENPVEYNCFAVPRRLAVRRASLSRRSSC

Query:  LALHGACRLKLFNAKSSQVTNLAHLTLTESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSVVNTINKGKAPTEQERSQMEYCKAITLHHEEEI
                                  + E  +R +++E  V  +   + G++ +IKN+E Q+GQ+   +NT+ KGK P++ E    E+CKA+TL   +E+
Subjt:  LALHGACRLKLFNAKSSQVTNLAHLTLTESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQLVSVVNTINKGKAPTEQERSQMEYCKAITLHHEEEI

Query:  QEAEEQETTEP
        QE E+++  EP
Subjt:  QEAEEQETTEP

A0A6P6XAQ1 Reverse transcriptase1.7e-5847.22Show/hide
Query:  IRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT---------------------DKARDWLQSIPPGSITT
        +RD+  P  QG Q+ IV   +NANNF++K  LIQM Q   Y G+ TEDPNSHL++FL+IC T                     DKA+ WLQS PP + TT
Subjt:  IRDYFQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGT---------------------DKARDWLQSIPPGSITT

Query:  WDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKTVENVCTLLEDMA
        WD L +A L KFFPP KT KLR +I +F QQ  E L EAWERY++L R+CP HG PDWL +Q FY  L   TKT VD AAGG L+ KT E    L+E+MA
Subjt:  WDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQLLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKTVENVCTLLEDMA

Query:  TNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQTI
         NNYQW ++R   ++  AG+ E+D ++ L A+M  +     +  G+ S Q +
Subjt:  TNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIANAFLKFSGTRSAQTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCACGTGGACAAGGGCGAGGACGAGGACGCAGTCGTGGTAGGGGTGGTAGAGGCCAGACACCCCAGGAGCAAGTAGATCCTTCTATCGATCAACATGTTGAGGA
TCTCCTTGAACCTCAAGCTCCTGTGCAGCCTGCACCTCCAGCGCAGCCGCAGACAATCACTCAGACTCTAGAGGCCCTTCAAGCGCTTATGAATAACGCTATTGCCAACC
AGGCGAACCAAAATGAGAACCAAGGTCAGACGGGCTCAACTGAGCTTAAAGAATCTACCCCAATGGCCGATCCAAATCCTCAGGAGGAGCCCAAGCCTATTAGAGACTAC
TTTCAGCCTGTGTTCCAAGGGAAACAATCGGGGATTGTCTATGCTCTGATTAATGCCAACAATTTCAAGCTGAAAACTGGTCTCATTCAAATGGCTCAAGACTGCGCTTA
CAAAGGATCACCCACAGAGGATCCAAATTCTCACTTGAATTCTTTCCTAGACATCTGCGGGACGGATAAAGCGAGAGATTGGTTGCAGTCTATTCCACCTGGGAGCATTA
CCACCTGGGATGCTTTGGTCCAGGCATTATTAAAGAAATTCTTCCCTCCTGCTAAGACAGTCAAGCTGAGGACCGAAATTGAGACGTTCCAGCAGCAGTTTGACGAGCAA
TTGCTCGAAGCATGGGAACGTTACAAAAAGTTGTTGAGGAAGTGCCCTCAGCATGGATATCCTGATTGGTTACAAATTCAACTCTTTTATACCGATTTAAATCCAAGTAC
TAAAACTATTGTTGATGTAGCTGCAGGTGGGACTCTATTGTCCAAGACCGTGGAAAATGTGTGTACATTACTGGAGGACATGGCCACCAACAACTATCAGTGGCCATCTG
ATCGGTTTACACCAAAGAAGATTGATGCTGGAGTATTCGAAATAGACAACGTAAGTGCACTCCAAGCCCAGATGTCTACTATTGCTAATGCTTTTCTGAAGTTTTCAGGT
ACAAGGAGTGCTCAAACTATTGATTCAGCAGCTGCCCTTGCATCTCAATCTCAGGAGGAGACCTTAGAACAGCTCCCTTCTTCTACCTTCAACCGCCGCCTCCCTTCTTC
GTCATTCTTCTTCAACGACCTTCGGTCGTCGCAGCTTTCATCCTCCGTTCTTCAACCTTCGACCCCCGCAGAGGGTGACAGAGCACTGCCGAATGTGTTTGGAGCTCTAA
TGGCTTTGTGGGATTTCTGCTTGTTGTTTTTCTTCTTGATCTTTGCTTCTATTCCACTTGCTTTTGTTGTTACAGATGCTTCTGATGGGATTGCTGGATTTGGTATTGTG
GTTTTGGGACGGAGATTGGGAAATTGGGGATTTGGGTTCTTTGTTGAGCTTGGAGAAAACCCAGTTGAGTACAATTGTTTCGCCGTGCCTCGCCGTCTCGCCGTCCGCCG
TGCATCGTTGTCTCGCCGTTCTTCGTGCCTCGCTCTCCACGGCGCTTGCCGTTTGAAGCTGTTCAATGCAAAGAGCTCACAAGTTACCAACCTTGCACATCTCACGTTGA
CAGAATCTAGCAACAGAACGAACAAGCTGGAGGAGGTCGTGATCGCCATAAACACCACGGTGATTGGCCATAGTGCAACAATAAAGAATATAGAAACGCAGCTGGGACAA
CTGGTAAGTGTCGTTAATACCATCAACAAGGGTAAGGCCCCAACTGAGCAAGAGAGGTCCCAAATGGAGTATTGTAAAGCCATCACTTTGCATCATGAGGAAGAAATTCA
AGAAGCTGAGGAGCAGGAGACTACTGAACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCACGTGGACAAGGGCGAGGACGAGGACGCAGTCGTGGTAGGGGTGGTAGAGGCCAGACACCCCAGGAGCAAGTAGATCCTTCTATCGATCAACATGTTGAGGA
TCTCCTTGAACCTCAAGCTCCTGTGCAGCCTGCACCTCCAGCGCAGCCGCAGACAATCACTCAGACTCTAGAGGCCCTTCAAGCGCTTATGAATAACGCTATTGCCAACC
AGGCGAACCAAAATGAGAACCAAGGTCAGACGGGCTCAACTGAGCTTAAAGAATCTACCCCAATGGCCGATCCAAATCCTCAGGAGGAGCCCAAGCCTATTAGAGACTAC
TTTCAGCCTGTGTTCCAAGGGAAACAATCGGGGATTGTCTATGCTCTGATTAATGCCAACAATTTCAAGCTGAAAACTGGTCTCATTCAAATGGCTCAAGACTGCGCTTA
CAAAGGATCACCCACAGAGGATCCAAATTCTCACTTGAATTCTTTCCTAGACATCTGCGGGACGGATAAAGCGAGAGATTGGTTGCAGTCTATTCCACCTGGGAGCATTA
CCACCTGGGATGCTTTGGTCCAGGCATTATTAAAGAAATTCTTCCCTCCTGCTAAGACAGTCAAGCTGAGGACCGAAATTGAGACGTTCCAGCAGCAGTTTGACGAGCAA
TTGCTCGAAGCATGGGAACGTTACAAAAAGTTGTTGAGGAAGTGCCCTCAGCATGGATATCCTGATTGGTTACAAATTCAACTCTTTTATACCGATTTAAATCCAAGTAC
TAAAACTATTGTTGATGTAGCTGCAGGTGGGACTCTATTGTCCAAGACCGTGGAAAATGTGTGTACATTACTGGAGGACATGGCCACCAACAACTATCAGTGGCCATCTG
ATCGGTTTACACCAAAGAAGATTGATGCTGGAGTATTCGAAATAGACAACGTAAGTGCACTCCAAGCCCAGATGTCTACTATTGCTAATGCTTTTCTGAAGTTTTCAGGT
ACAAGGAGTGCTCAAACTATTGATTCAGCAGCTGCCCTTGCATCTCAATCTCAGGAGGAGACCTTAGAACAGCTCCCTTCTTCTACCTTCAACCGCCGCCTCCCTTCTTC
GTCATTCTTCTTCAACGACCTTCGGTCGTCGCAGCTTTCATCCTCCGTTCTTCAACCTTCGACCCCCGCAGAGGGTGACAGAGCACTGCCGAATGTGTTTGGAGCTCTAA
TGGCTTTGTGGGATTTCTGCTTGTTGTTTTTCTTCTTGATCTTTGCTTCTATTCCACTTGCTTTTGTTGTTACAGATGCTTCTGATGGGATTGCTGGATTTGGTATTGTG
GTTTTGGGACGGAGATTGGGAAATTGGGGATTTGGGTTCTTTGTTGAGCTTGGAGAAAACCCAGTTGAGTACAATTGTTTCGCCGTGCCTCGCCGTCTCGCCGTCCGCCG
TGCATCGTTGTCTCGCCGTTCTTCGTGCCTCGCTCTCCACGGCGCTTGCCGTTTGAAGCTGTTCAATGCAAAGAGCTCACAAGTTACCAACCTTGCACATCTCACGTTGA
CAGAATCTAGCAACAGAACGAACAAGCTGGAGGAGGTCGTGATCGCCATAAACACCACGGTGATTGGCCATAGTGCAACAATAAAGAATATAGAAACGCAGCTGGGACAA
CTGGTAAGTGTCGTTAATACCATCAACAAGGGTAAGGCCCCAACTGAGCAAGAGAGGTCCCAAATGGAGTATTGTAAAGCCATCACTTTGCATCATGAGGAAGAAATTCA
AGAAGCTGAGGAGCAGGAGACTACTGAACCATAA
Protein sequenceShow/hide protein sequence
MPPRGQGRGRGRSRGRGGRGQTPQEQVDPSIDQHVEDLLEPQAPVQPAPPAQPQTITQTLEALQALMNNAIANQANQNENQGQTGSTELKESTPMADPNPQEEPKPIRDY
FQPVFQGKQSGIVYALINANNFKLKTGLIQMAQDCAYKGSPTEDPNSHLNSFLDICGTDKARDWLQSIPPGSITTWDALVQALLKKFFPPAKTVKLRTEIETFQQQFDEQ
LLEAWERYKKLLRKCPQHGYPDWLQIQLFYTDLNPSTKTIVDVAAGGTLLSKTVENVCTLLEDMATNNYQWPSDRFTPKKIDAGVFEIDNVSALQAQMSTIANAFLKFSG
TRSAQTIDSAAALASQSQEETLEQLPSSTFNRRLPSSSFFFNDLRSSQLSSSVLQPSTPAEGDRALPNVFGALMALWDFCLLFFFLIFASIPLAFVVTDASDGIAGFGIV
VLGRRLGNWGFGFFVELGENPVEYNCFAVPRRLAVRRASLSRRSSCLALHGACRLKLFNAKSSQVTNLAHLTLTESSNRTNKLEEVVIAINTTVIGHSATIKNIETQLGQ
LVSVVNTINKGKAPTEQERSQMEYCKAITLHHEEEIQEAEEQETTEP