; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011600 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011600
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag-pro-like protein
Genome locationchr1:28768654..28769142
RNA-Seq ExpressionLag0011600
SyntenyLag0011600
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037621.1 uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]2.3e-4156.1Show/hide
Query:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR
        MDSKIL + +     EM++ ++ AL  E S    E  +SF P+PL++ YQE+HN S S  NP+ +TIQV  PFKFKD+K VPWRY+C  +T PS+DNIT 
Subjt:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR

Query:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE
        +SGITRSGRCY P+NL  PS GLIL Q RKN+K+ + EH K +D++ PIIAKD+E+KK VT+EE
Subjt:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE

TYK21788.1 uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]2.6e-4055.49Show/hide
Query:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR
        MDSKIL + +     EM++ ++ AL  E S    E  +SF P+PL++ YQE+HN S S  NP+ +TIQV  PFKFKD+K VPWRY+C  +T PS+DNIT 
Subjt:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR

Query:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE
        +SGITRSGRCY P+NL  P  GLIL Q RKN+K  + EH K +D++ PIIAKD+E+KK VT+EE
Subjt:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE

XP_031737539.1 uncharacterized protein LOC116402431 [Cucumis sativus]1.2e-4053.09Show/hide
Query:  MDSKILMIC--KRASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNASSLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITRV
        MDSKIL +   +   EM+++++  L GE +  E      F P+PL++ YQEN N SS  NP+ + +QV  PFKFKD+K VPWRY+C  +T PS+DNIT +
Subjt:  MDSKILMIC--KRASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNASSLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITRV

Query:  SGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEE
        SGITRSGRCY P+NL  PSS L LGQ RK++K+ ++EHDK +D++  +IAKD+E KKPVT+E
Subjt:  SGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEE

XP_031737546.1 uncharacterized protein LOC116402435 [Cucumis sativus]2.6e-4052.47Show/hide
Query:  MDSKILMIC--KRASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNASSLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITRV
        MDSKIL +   +   EM+++++  L GE +  E      F P+PL++ YQEN N SS  NP+ + ++V  PFKFKD+K VPWRY+C  +T PS+DNIT +
Subjt:  MDSKILMIC--KRASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNASSLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITRV

Query:  SGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEE
        SGITRSGRCY P+NL  PSS L LGQ RK++K+ ++EHDK +D++  +IAKD+E KKPVT+E
Subjt:  SGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEE

XP_031739260.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116402917 [Cucumis sativus]2.6e-4052.47Show/hide
Query:  MDSKILMIC--KRASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNASSLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITRV
        MDSKIL +   +   EM+++++  L GE +  E      F P+PL++ YQEN N SS  NP+ + ++V  PFKFKD+K VPWRY+C  +T PS+DNIT +
Subjt:  MDSKILMIC--KRASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNASSLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITRV

Query:  SGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEE
        SGITRSGRCY P+NL  PSS L LGQ RK++K+ ++EHDK +D++  +IAKD+E KKPVT+E
Subjt:  SGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEE

TrEMBL top hitse value%identityAlignment
A0A5A7T0H8 Uncharacterized protein4.0e-3953.66Show/hide
Query:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR
        MDSKIL + +     EM+  ++  L  E S    E  +SF P+PL++ YQE+ N S S  NP+ +TIQV  PFKFKD+K VPWRY+C  +T P +DNIT 
Subjt:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR

Query:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE
        +SGITRSGRCY P+NL  PS+GLIL Q RKN+K+   EH K +D++ PI+AKD+E+KK VT+EE
Subjt:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE

A0A5A7T0R1 Uncharacterized protein3.6e-4053.66Show/hide
Query:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR
        MDSKIL + +     EM++ ++  L  E S ++    +SF P+PL++ YQE+HN S S  NP+ +TIQV  PFKFKD+K +PWRY+C  +T P +DNIT 
Subjt:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR

Query:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE
        +SGITRSGRCY P+NL  PS+GLIL Q RKN+K+   EH K +D++ PIIAKD+E+KK VT+EE
Subjt:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE

A0A5A7T7R4 Ribonuclease H1.1e-4156.1Show/hide
Query:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR
        MDSKIL + +     EM++ ++ AL  E S    E  +SF P+PL++ YQE+HN S S  NP+ +TIQV  PFKFKD+K VPWRY+C  +T PS+DNIT 
Subjt:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR

Query:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE
        +SGITRSGRCY P+NL  PS GLIL Q RKN+K+ + EH K +D++ PIIAKD+E+KK VT+EE
Subjt:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE

A0A5A7TRL7 Ribonuclease H1.6e-4054.88Show/hide
Query:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR
        MDSKIL + +     EM++ ++ AL  E S    E  +SF P+PL++ YQE+HN S S  NP+ + IQV  PFKFKD+K VPWRY+C  +T PS+DNIT 
Subjt:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR

Query:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE
        +SGITRSGRCY P+NL  PS GLIL Q RKN+K+ + EH K +D++ PIIAKD+E+K  VT+EE
Subjt:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE

A0A5D3DEB3 Retrotrans_gag domain-containing protein1.3e-4055.49Show/hide
Query:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR
        MDSKIL + +     EM++ ++ AL  E S    E  +SF P+PL++ YQE+HN S S  NP+ +TIQV  PFKFKD+K VPWRY+C  +T PS+DNIT 
Subjt:  MDSKILMICK--RASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNAS-SLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITR

Query:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE
        +SGITRSGRCY P+NL  P  GLIL Q RKN+K  + EH K +D++ PIIAKD+E+KK VT+EE
Subjt:  VSGITRSGRCYTPENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAAAGATACTCATGATATGTAAAAGAGCAAGCGAAATGAGGGAAGATGAAGTCAACGCATTAACAGGGGAATCTTCTTCCCACGAAAAGGAAGTAATTGAGTC
CTTCCCACCAAAGCCTTTATCTATCATATACCAAGAGAATCATAATGCTTCATCTCTTCAAAATCCTCGACCTATCACAATTCAAGTGTCTGGTCCTTTCAAGTTTAAGG
ACATGAAAGAAGTACCATGGAGATATGAGTGTCATACTCTTACAAATCCATCAATTGACAACATTACAAGAGTTAGTGGAATAACTCGGAGTGGTAGGTGTTATACACCA
GAAAATCTATTGAAACCATCAAGTGGCTTGATACTGGGGCAAACGAGGAAAAATGATAAAAAGGTTATGTCTGAGCATGACAAAGGACGAGATATAGATGAGCCTATCAT
AGCTAAAGATATGGAATTCAAGAAGCCTGTCACTGAAGAGGAAACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAAAGATACTCATGATATGTAAAAGAGCAAGCGAAATGAGGGAAGATGAAGTCAACGCATTAACAGGGGAATCTTCTTCCCACGAAAAGGAAGTAATTGAGTC
CTTCCCACCAAAGCCTTTATCTATCATATACCAAGAGAATCATAATGCTTCATCTCTTCAAAATCCTCGACCTATCACAATTCAAGTGTCTGGTCCTTTCAAGTTTAAGG
ACATGAAAGAAGTACCATGGAGATATGAGTGTCATACTCTTACAAATCCATCAATTGACAACATTACAAGAGTTAGTGGAATAACTCGGAGTGGTAGGTGTTATACACCA
GAAAATCTATTGAAACCATCAAGTGGCTTGATACTGGGGCAAACGAGGAAAAATGATAAAAAGGTTATGTCTGAGCATGACAAAGGACGAGATATAGATGAGCCTATCAT
AGCTAAAGATATGGAATTCAAGAAGCCTGTCACTGAAGAGGAAACATAA
Protein sequenceShow/hide protein sequence
MDSKILMICKRASEMREDEVNALTGESSSHEKEVIESFPPKPLSIIYQENHNASSLQNPRPITIQVSGPFKFKDMKEVPWRYECHTLTNPSIDNITRVSGITRSGRCYTP
ENLLKPSSGLILGQTRKNDKKVMSEHDKGRDIDEPIIAKDMEFKKPVTEEET