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Lag0011601 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011601
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag-pro-like protein
Genome locationchr1:28769841..28770350
RNA-Seq ExpressionLag0011601
SyntenyLag0011601
Gene Ontology termsGO:0071897 - DNA biosynthetic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0034061 - DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036947.1 uncharacterized protein E6C27_scaffold86G00270 [Cucumis melo var. makuwa]5.3e-4455.95Show/hide
Query:  FRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPSL
        FRSFEIAHAT++     E+ + H SKV+ MTT+++  GGY LN+NLE  L I SN G FGLGYKP+  DKIRLQEEKK+ RLA+LE +EF P++K +P L
Subjt:  FRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPSL

Query:  YDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD
        YD FKS  +S+S+ +S   D LL ++ +LS+A V  E   + + +YAC PDFELNNWD VDLP FS+D
Subjt:  YDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD

KAA0036957.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]9.0e-4455.95Show/hide
Query:  FRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPSL
        FRSFEIAHAT++     E+ + H SKV+ MTT+++  GGY LN+NLE  L I SN G FGLGYKP+  DKIRLQE KK+ RLA+LE +EF P++K +P L
Subjt:  FRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPSL

Query:  YDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD
        YD FKS  +S+S+ +S   D LL ++ +LS+AAV  E   + + +YAC PDFELNNWD VDLP FS+D
Subjt:  YDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD

KAA0046904.1 protein NYNRIN-like [Cucumis melo var. makuwa]1.5e-4355.62Show/hide
Query:  FFRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPS
        FFRSFEIAHAT++     E+ + H SKV+ MTT+++   GY LNQNLE  L  S N G FGLGYKP+  DKIRLQ+EKK+ RLA+LE +EF P++K +P 
Subjt:  FFRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPS

Query:  LYDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD
        LYD FKS  +S+++ +S   D LL ++ +LS+AAV  E   + + +YACSPDFELNNWD VDLP FS+D
Subjt:  LYDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD

TYK03244.1 protein NYNRIN-like [Cucumis melo var. makuwa]1.5e-4355.62Show/hide
Query:  FFRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPS
        FFRSFEIAHAT++     E+ + H SKV+ MTT+++   GY LNQNLE  L  S N G FGLGYKP+  DKIRLQ+EKK+ RLA+LE +EF P++K +P 
Subjt:  FFRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPS

Query:  LYDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD
        LYD FKS  +S+++ +S   D LL ++ +LS+AAV  E   + + +YACSPDFELNNWD VDLP FS+D
Subjt:  LYDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD

TYK21788.1 uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]1.2e-4355.95Show/hide
Query:  FRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPSL
        FRSFEIAHAT++     E+ + H SKV+ MTT+++  GGY LN+NLE  L I SN G FGLGYKP+  DKIRLQE+KK+ RLA+LE +EF P++K +P L
Subjt:  FRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPSL

Query:  YDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD
        YD FKS  +S+S+ +S   D LL ++ +LS+AAV  E   + + +YAC PDFELNNWD VDLP FS+D
Subjt:  YDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD

TrEMBL top hitse value%identityAlignment
A0A5A7T5W2 Retrotrans_gag domain-containing protein2.5e-4455.95Show/hide
Query:  FRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPSL
        FRSFEIAHAT++     E+ + H SKV+ MTT+++  GGY LN+NLE  L I SN G FGLGYKP+  DKIRLQEEKK+ RLA+LE +EF P++K +P L
Subjt:  FRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPSL

Query:  YDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD
        YD FKS  +S+S+ +S   D LL ++ +LS+A V  E   + + +YAC PDFELNNWD VDLP FS+D
Subjt:  YDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein4.3e-4455.95Show/hide
Query:  FRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPSL
        FRSFEIAHAT++     E+ + H SKV+ MTT+++  GGY LN+NLE  L I SN G FGLGYKP+  DKIRLQE KK+ RLA+LE +EF P++K +P L
Subjt:  FRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPSL

Query:  YDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD
        YD FKS  +S+S+ +S   D LL ++ +LS+AAV  E   + + +YAC PDFELNNWD VDLP FS+D
Subjt:  YDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD

A0A5A7TV65 Protein NYNRIN-like7.4e-4455.62Show/hide
Query:  FFRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPS
        FFRSFEIAHAT++     E+ + H SKV+ MTT+++   GY LNQNLE  L  S N G FGLGYKP+  DKIRLQ+EKK+ RLA+LE +EF P++K +P 
Subjt:  FFRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPS

Query:  LYDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD
        LYD FKS  +S+++ +S   D LL ++ +LS+AAV  E   + + +YACSPDFELNNWD VDLP FS+D
Subjt:  LYDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD

A0A5D3BVQ7 Protein NYNRIN-like7.4e-4455.62Show/hide
Query:  FFRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPS
        FFRSFEIAHAT++     E+ + H SKV+ MTT+++   GY LNQNLE  L  S N G FGLGYKP+  DKIRLQ+EKK+ RLA+LE +EF P++K +P 
Subjt:  FFRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPS

Query:  LYDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD
        LYD FKS  +S+++ +S   D LL ++ +LS+AAV  E   + + +YACSPDFELNNWD VDLP FS+D
Subjt:  LYDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD

A0A5D3DEB3 Retrotrans_gag domain-containing protein5.7e-4455.95Show/hide
Query:  FRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPSL
        FRSFEIAHAT++     E+ + H SKV+ MTT+++  GGY LN+NLE  L I SN G FGLGYKP+  DKIRLQE+KK+ RLA+LE +EF P++K +P L
Subjt:  FRSFEIAHATIVGGF--ELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPSL

Query:  YDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD
        YD FKS  +S+S+ +S   D LL ++ +LS+AAV  E   + + +YAC PDFELNNWD VDLP FS+D
Subjt:  YDNFKSVALSFSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTTCGTTCTTTTGAAATTGCCCATGCAACTATAGTGGGAGGGTTTGAACTGACAAGATCTCACATGTCTAAGGTGAAAGAAATGACAACTAAAGTAGTGGTGAA
TGGAGGATATCAGTTGAATCAAAACTTAGAAAGGTTTCTAAGCATATCAAGCAATGCTGGGACATTTGGGTTGGGCTATAAGCCTACCAAATGTGATAAAATTAGACTTC
AGGAAGAAAAGAAAGAAAATCGATTGGCAAGGTTAGAAGGGAAGGAATTCCCTCCAAATCTCAAGTGTTTACCATCATTGTATGATAACTTCAAAAGTGTTGCCTTGAGT
TTCTCAACGTTGGACTCTTACTCAACAGATCACTTATTAATGGAAGTGCGAAACTTGTCGATTGCAGCAGTTGTTAATGAGCTACCACACAAAAAGGACATAATCTACGC
ATGCTCACCTGATTTCGAGCTTAACAATTGGGATGTTGTAGATCTACCTATATTTTCACAAGATTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTTCGTTCTTTTGAAATTGCCCATGCAACTATAGTGGGAGGGTTTGAACTGACAAGATCTCACATGTCTAAGGTGAAAGAAATGACAACTAAAGTAGTGGTGAA
TGGAGGATATCAGTTGAATCAAAACTTAGAAAGGTTTCTAAGCATATCAAGCAATGCTGGGACATTTGGGTTGGGCTATAAGCCTACCAAATGTGATAAAATTAGACTTC
AGGAAGAAAAGAAAGAAAATCGATTGGCAAGGTTAGAAGGGAAGGAATTCCCTCCAAATCTCAAGTGTTTACCATCATTGTATGATAACTTCAAAAGTGTTGCCTTGAGT
TTCTCAACGTTGGACTCTTACTCAACAGATCACTTATTAATGGAAGTGCGAAACTTGTCGATTGCAGCAGTTGTTAATGAGCTACCACACAAAAAGGACATAATCTACGC
ATGCTCACCTGATTTCGAGCTTAACAATTGGGATGTTGTAGATCTACCTATATTTTCACAAGATTTGTAA
Protein sequenceShow/hide protein sequence
MFFRSFEIAHATIVGGFELTRSHMSKVKEMTTKVVVNGGYQLNQNLERFLSISSNAGTFGLGYKPTKCDKIRLQEEKKENRLARLEGKEFPPNLKCLPSLYDNFKSVALS
FSTLDSYSTDHLLMEVRNLSIAAVVNELPHKKDIIYACSPDFELNNWDVVDLPIFSQDL