CuGenDBv2

Gene ID	Lag0011607
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	WD_REPEATS_REGION domain-containing protein
Genome location	chr1:28855611..28858161
RNA-Seq Expression	Lag0011607
Synteny	Lag0011607
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022151653.1 uncharacterized protein LOC111019565 [Momordica charantia]

3.9e-59

93.33

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PFT ASNMLRHRLLP+LRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME +GISASGSSESD
Subjt:  LERLEMEKLGISASGSSESD

XP_022925065.1 uncharacterized protein LOC111432424 [Cucurbita moschata]

1.3e-59

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF TASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME L +S SGSSESD
Subjt:  LERLEMEKLGISASGSSESD

XP_022966491.1 uncharacterized protein LOC111466129 [Cucurbita maxima]

2.1e-60

96.67

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF TASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME L IS SGSSESD
Subjt:  LERLEMEKLGISASGSSESD

XP_023517134.1 uncharacterized protein LOC111780983 [Cucurbita pepo subsp. pepo]

4.6e-60

95.83

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF TASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME L +SASGSSESD
Subjt:  LERLEMEKLGISASGSSESD

XP_038881129.1 uncharacterized protein LOC120072731 [Benincasa hispida]

3.5e-60

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPFT ASNMLRHRLLPSLRTRGGAA GQSRWTSPGHE++PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEMEKLG+S SGSSESD
Subjt:  LERLEMEKLGISASGSSESD

TrEMBL top hits

e value

%identity

Alignment

A0A067KZT1 Uncharacterized protein

9.1e-54

88.14

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PFTTAS MLR RL  SLRTRGG A G SRWTSPGHEE+PKGYLFNRTPPP GQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSE
        LERLEMEKLG+S SG SE
Subjt:  LERLEMEKLGISASGSSE

A0A6J1DCT8 uncharacterized protein LOC111019565

1.9e-59

93.33

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSP PFT ASNMLRHRLLP+LRTRGGAA GQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME +GISASGSSESD
Subjt:  LERLEMEKLGISASGSSESD

A0A6J1EGU8 uncharacterized protein LOC111432424

6.5e-60

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF TASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME L +S SGSSESD
Subjt:  LERLEMEKLGISASGSSESD

A0A6J1HPH2 uncharacterized protein LOC111466129

1.0e-60

96.67

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPSPTPF TASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSESD
        LERLEME L IS SGSSESD
Subjt:  LERLEMEKLGISASGSSESD

I3NMS3 Uncharacterized protein

1.6e-53

88.14

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPS  PFTTAS+MLR RL  SLRTRGGAA G SRWTSPGHEE+PKGYLFNRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGSSE
        LERLEMEKLG S SG SE
Subjt:  LERLEMEKLGISASGSSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G42310.1 unknown protein

2.7e-42

68.97

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        MPS    T A+  LR+R+       G  + G SRW +PGHEE+PKGY  NRTPP PGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGS
        LERLEMEKL  +   S
Subjt:  LERLEMEKLGISASGS

AT3G57785.1 unknown protein

1.2e-42

70.69

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Query:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA
        M S  P   A+  LR+R+    R+ G  +TG SRW +PGHEE+PKGY  NRTPPPPGQSRKWEDWELPCY+TSFLTIVILGVGLNAKPDL+IETWAHQKA
Subjt:  MPSPTPFTTASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKA

Query:  LERLEMEKLGISASGS
        LERLEMEKL  +   S
Subjt:  LERLEMEKLGISASGS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAATTTGTTACGCTGCCATGTCGTTAATAATGCTCTTTGTCCAGTCTGCAAGAAACATCCAGAAACAACTGACCATGCTCTTTTTAGGTGTTCTAGAGCCAAGAGGTT
CTGGTGCCAATTACATACTCAAATCAAAATCCGTGAGTACAATCATGTATCTATTCAGGATCGTTTTTGGGAAATTTTTCAATCAGACCAAAAGGACATGTTGGACTGGA
TTTGTGTAGGAGCTTGGGCGCTTTGGAATGATCGCAATGGTGTAGTTCATGAAAAGTCTATACCAAATGAAAGCGAGAAGCGTGAATGGTTGCATCGGACGTCGCAAGGA
AGTGCTAAAGTAGCGACGCATGGCCAATATCCACAACTACTGAATCCACTATATGTGGAAGCAAGAGCAGTGTTGGAAGATCTCATGTTAGCACAACGAATGAAAATCAT
GGAGTTTATTTACCTTCGTAGGGATTATAATAGCATGGCTCATAAGTTAGCCTGGATAGGGCTCCGATCTGAACCAAAGTTATGGTTTCAGACCACAAGGTCTCACACTG
GACTGAACAATCCCTCTCTTTCTCCCTTTCTCTTTCGCTCCCGCAGGATCGCTCGCAGAGTCGCTGAAATCGAAGATCAACTCAAAATGCCCTCGCCAACGCCCTTTACG
ACTGCCTCAAATATGCTCCGGCACCGCCTTCTCCCTTCTCTGCGGACCCGCGGCGGCGCCGCCACCGGCCAGAGCCGATGGACCAGTCCTGGCCACGAGGAGCAGCCTAA
GGGCTATCTTTTCAATCGGACGCCGCCTCCACCAGGTCAGTCCCGTAAATGGGAGGATTGGGAGCTGCCTTGTTATGTTACTAGTTTTCTTACTATTGTGATTCTTGGCG
TTGGCCTCAACGCCAAGCCTGATCTCACAATTGAGACTTGGGCTCACCAGAAAGCCCTCGAGCGCCTTGAGATGGAGAAGCTCGGTATCTCTGCCTCTGGATCATCTGAA
TCTGATTGA

mRNA sequence

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Protein sequence

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MNLLRCHVVNNALCPVCKKHPETTDHALFRCSRAKRFWCQLHTQIKIREYNHVSIQDRFWEIFQSDQKDMLDWICVGAWALWNDRNGVVHEKSIPNESEKREWLHRTSQG
SAKVATHGQYPQLLNPLYVEARAVLEDLMLAQRMKIMEFIYLRRDYNSMAHKLAWIGLRSEPKLWFQTTRSHTGLNNPSLSPFLFRSRRIARRVAEIEDQLKMPSPTPFT
TASNMLRHRLLPSLRTRGGAATGQSRWTSPGHEEQPKGYLFNRTPPPPGQSRKWEDWELPCYVTSFLTIVILGVGLNAKPDLTIETWAHQKALERLEMEKLGISASGSSE
SD

Lag0011607 (gene) of Sponge gourd (AG-4) v1 genome