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Lag0011612 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011612
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr1:29081414..29082347
RNA-Seq ExpressionLag0011612
SyntenyLag0011612
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6734747.1 hypothetical protein I3842_01G285500 [Carya illinoinensis]2.3e-0631.94Show/hide
Query:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQVAEEEETTELEELTDEA-------EEGTTSNKAEKLNLEPSI---PSPTVL
        + +KN++ Q+GQL + +N   +G    + E +  E CKAIT+   +E + A  +E+       +         EE   ++  E+ +L P+I    +P +L
Subjt:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQVAEEEETTELEELTDEA-------EEGTTSNKAEKLNLEPSI---PSPTVL

Query:  VPNL---KNKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH
         P L   +  +K+    +F KFLD F  +++NIPF+DALEQMP+
Subjt:  VPNL---KNKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH

KAG7947748.1 hypothetical protein I3843_14G109500 [Carya illinoinensis]2.3e-0631.94Show/hide
Query:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQVAEEEETTELEELTDEA-------EEGTTSNKAEKLNLEPSI---PSPTVL
        + +KN++ Q+GQL + +N   +G    + E +  E CKAIT+   +E + A  +E+       +         EE   ++  E+ +L P+I    +P +L
Subjt:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQVAEEEETTELEELTDEA-------EEGTTSNKAEKLNLEPSI---PSPTVL

Query:  VPNL---KNKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH
         P L   +  +K+    +F KFLD F  +++NIPF+DALEQMP+
Subjt:  VPNL---KNKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH

XP_024024249.1 uncharacterized protein LOC112092388 [Morus notabilis]2.1e-0733.33Show/hide
Query:  IKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQVAEEEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNLKNKKKKNSKAK
        ++TQ+GQL   + +++ G    D  K+  E C A+T+  E+E +  + +E  + +E   E+++   S + + ++   + P  T  +P  +  KKKN  A+
Subjt:  IKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQVAEEEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNLKNKKKKNSKAK

Query:  FEKFLDAFMGLNVNIPFSDALEQMPH
        F KFL+ F  +++NIPF+DALEQMP+
Subjt:  FEKFLDAFMGLNVNIPFSDALEQMPH

XP_024029937.1 uncharacterized protein LOC112094091 [Morus notabilis]1.2e-0734.09Show/hide
Query:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQVAE-EEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNLKNKKK
        + +K+++ ++GQL + V   + GK   D E +  ++CKAIT+   +E +  + +E+ T+ EE+  E  + +   K+      P + +PT+  P  +  KK
Subjt:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQVAE-EEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNLKNKKK

Query:  KNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH
        K   A+F KFL+ F  +++NIPF DALEQMP+
Subjt:  KNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH

XP_024032903.1 uncharacterized protein LOC112095347 [Morus notabilis]8.4e-0936.36Show/hide
Query:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQVAE-EEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNLKNKKK
        + +K+++ Q+GQL +VV   + GK   D E +  ++CKAIT+   +E +  + +E+ TE EE+  E  + +   K+      P + +PT+  P  +  KK
Subjt:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQVAE-EEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNLKNKKK

Query:  KNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH
        K   A+F KFL+ F  +++NIPF+DALEQMP+
Subjt:  KNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH

TrEMBL top hitse value%identityAlignment
A0A151T9N8 Retrotrans_gag domain-containing protein2.7e-0528.57Show/hide
Query:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQV---AEEEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNLKNK
        ++I+N++ Q+GQL   +          + + +  E+C  + +  E+E ++   AE+ E  ++E   +E+ +G    +++K   E   P P   +P     
Subjt:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQV---AEEEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNLKNK

Query:  KKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMP
         KK+ + +F +FLD    L +NIPF++ALEQMP
Subjt:  KKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMP

A0A151TZJ8 Retrotrans_gag domain-containing protein2.1e-0528.77Show/hide
Query:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVH----------QEEETQV------AEEEETTELEELTDEAEEGTTSNKAEKLNLEPSI
        ++IKN++ Q+GQL   +     G    + + +  E+CK +              ++E +V      AE+++ + +EE+ ++   G    K +K+  E   
Subjt:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVH----------QEEETQV------AEEEETTELEELTDEAEEGTTSNKAEKLNLEPSI

Query:  PSPTVLVPNLKNKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMP
          PT  +P      +K+ + +F +FLD F  L +NIPFS+ALEQMP
Subjt:  PSPTVLVPNLKNKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMP

A0A1U7Z0W9 uncharacterized protein LOC1045898884.2e-0633.33Show/hide
Query:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQ----EEETQVAEEEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVL-VPNLK
        S+I N++ Q+GQL +V++  N+G    + E +  E  KAI++      E +  V  +   T++E   +E  + +  N+ +K N   +  SP V  +P  +
Subjt:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQ----EEETQVAEEEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVL-VPNLK

Query:  NKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMP
          KK+ ++ +F KFLD F  L +NIPF++AL QMP
Subjt:  NKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMP

A0A1U7ZI47 uncharacterized protein LOC1045908592.5e-0634.31Show/hide
Query:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQVAEEEET------TELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNL
        ++IKN++TQ+GQL  ++++  +G    + E +  E  +AIT+ + +E Q  E++        T LE  T++ EE  + +K +K + +P +P P  L    
Subjt:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQEEETQVAEEEET------TELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNL

Query:  KNKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH
           K+   + +F KFL+ F  L++NIPF+DAL QMPH
Subjt:  KNKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH

A0A1U8PZ99 uncharacterized protein LOC1045892452.5e-0633.82Show/hide
Query:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVH-----QEEETQVAEEEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNLK
        ++IKN++TQ+GQL  ++++  +G    + E +  E  +AIT+      QE E +  EE +T    E  ++ EE   S K  + + +P +P P  L     
Subjt:  SAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVH-----QEEETQVAEEEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNLK

Query:  NKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH
          K+   + +F++FL+ F  L++NIPF+DAL QMPH
Subjt:  NKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCTGCAGGTGGGACTCTGTTGTCGAAGATCATGGAGAACACGCGCACACTTCTGGAGGATATGGCCACCAACAGCTATCTGGTCATCTGAGTGGGCTGCACCTAA
AAAGATTGATGCTAGAGTGTTCGAGATTTACAACGTAAGTGCACTTCAGGCCCAAATGTCTTCCCTTCCTTATGCTTTTCTGAAATTTTCAGCCATCAAGAACATTAAGA
CTCAGCTAGGACAACTGGTAAGTGTTGTCAACACTATGAACAAAGGTAAGGCCCTAGTTGACCAGGAAAAATCTCAGTTGGAGTACTGCAAGGCCATCACTGTGCATCAG
GAGGAGGAGACTCAAGTAGCTGAGGAGGAGGAGACTACTGAACTAGAGGAACTTACTGACGAAGCTGAAGAGGGAACCACTTCAAACAAAGCTGAAAAGCTTAATCTTGA
GCCCTCTATCCCTTCTCCTACTGTTTTAGTTCCTAATTTAAAGAATAAGAAAAAGAAAAATTCTAAGGCTAAGTTTGAAAAATTTCTAGATGCTTTTATGGGATTGAATG
TTAATATTCCTTTTTCAGATGCCCTGGAGCAAATGCCTCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGCTGCAGGTGGGACTCTGTTGTCGAAGATCATGGAGAACACGCGCACACTTCTGGAGGATATGGCCACCAACAGCTATCTGGTCATCTGAGTGGGCTGCACCTAA
AAAGATTGATGCTAGAGTGTTCGAGATTTACAACGTAAGTGCACTTCAGGCCCAAATGTCTTCCCTTCCTTATGCTTTTCTGAAATTTTCAGCCATCAAGAACATTAAGA
CTCAGCTAGGACAACTGGTAAGTGTTGTCAACACTATGAACAAAGGTAAGGCCCTAGTTGACCAGGAAAAATCTCAGTTGGAGTACTGCAAGGCCATCACTGTGCATCAG
GAGGAGGAGACTCAAGTAGCTGAGGAGGAGGAGACTACTGAACTAGAGGAACTTACTGACGAAGCTGAAGAGGGAACCACTTCAAACAAAGCTGAAAAGCTTAATCTTGA
GCCCTCTATCCCTTCTCCTACTGTTTTAGTTCCTAATTTAAAGAATAAGAAAAAGAAAAATTCTAAGGCTAAGTTTGAAAAATTTCTAGATGCTTTTATGGGATTGAATG
TTAATATTCCTTTTTCAGATGCCCTGGAGCAAATGCCTCATTAG
Protein sequenceShow/hide protein sequence
MQLQVGLCCRRSWRTRAHFWRIWPPTAIWSSEWAAPKKIDARVFEIYNVSALQAQMSSLPYAFLKFSAIKNIKTQLGQLVSVVNTMNKGKALVDQEKSQLEYCKAITVHQ
EEETQVAEEEETTELEELTDEAEEGTTSNKAEKLNLEPSIPSPTVLVPNLKNKKKKNSKAKFEKFLDAFMGLNVNIPFSDALEQMPH