; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011627 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011627
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr1:29329934..29333784
RNA-Seq ExpressionLag0011627
SyntenyLag0011627
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MBB1503002.1 pentapeptide repeat-containing protein [Propioniciclava sp. MC1683]1.9e-0424.84Show/hide
Query:  SSKFEGSLTSFARSFSKFEGASLHCSFSKFEGASLHCSFSKFEGASLHYYFSKFEGASLYCSFSKFEGASLHYSFSKFEGASLRCSFSKFEGASLRCSFS
        S++F G    F R  ++F G ++   ++ F G ++    ++F G ++H+  ++F G +++ + ++F G ++H+  ++F G ++  + +KF G+++  + +
Subjt:  SSKFEGSLTSFARSFSKFEGASLHCSFSKFEGASLHCSFSKFEGASLHYYFSKFEGASLYCSFSKFEGASLHYSFSKFEGASLRCSFSKFEGASLRCSFS

Query:  KFEGASLHC--SPFEGSPLRFSFSKFEGSPLLLFKCLVAVDGLVPLHLQMLAV
        KF G ++H   + F G  + F  ++F G   + F   V   G V    + LAV
Subjt:  KFEGASLHC--SPFEGSPLRFSFSKFEGSPLLLFKCLVAVDGLVPLHLQMLAV

QEV69541.1 pentapeptide repeat-containing protein [Streptomyces chartreusis]1.6e-0632.84Show/hide
Query:  FEGSLTSFARS-FS-----KFEGASLHCSFSKFEGASLHCSFSKFEGASLHYYFSKFEGASLYCSFSKFEGASLHYSFSKFEGASLRCSFSKFEGASLRC
        F G   SF R+ FS      + GA +  S +KF GA +  S ++F G S+++Y ++F  A +  S +KF GA + +S+++F G++L  + ++F G S+  
Subjt:  FEGSLTSFARS-FS-----KFEGASLHCSFSKFEGASLHCSFSKFEGASLHYYFSKFEGASLYCSFSKFEGASLHYSFSKFEGASLRCSFSKFEGASLRC

Query:  SFSKFEGASL--HCSPFEGSPLRFSFSKFEGSPL
        S +KF   ++  H + F G+ + F+ ++F GS L
Subjt:  SFSKFEGASL--HCSPFEGSPLRFSFSKFEGSPL

WP_150501859.1 pentapeptide repeat-containing protein [Streptomyces chartreusis]1.6e-0632.84Show/hide
Query:  FEGSLTSFARS-FS-----KFEGASLHCSFSKFEGASLHCSFSKFEGASLHYYFSKFEGASLYCSFSKFEGASLHYSFSKFEGASLRCSFSKFEGASLRC
        F G   SF R+ FS      + GA +  S +KF GA +  S ++F G S+++Y ++F  A +  S +KF GA + +S+++F G++L  + ++F G S+  
Subjt:  FEGSLTSFARS-FS-----KFEGASLHCSFSKFEGASLHCSFSKFEGASLHYYFSKFEGASLYCSFSKFEGASLHYSFSKFEGASLRCSFSKFEGASLRC

Query:  SFSKFEGASL--HCSPFEGSPLRFSFSKFEGSPL
        S +KF   ++  H + F G+ + F+ ++F GS L
Subjt:  SFSKFEGASL--HCSPFEGSPLRFSFSKFEGSPL

WP_189039146.1 pentapeptide repeat-containing protein [Streptomyces daqingensis]2.5e-0426.72Show/hide
Query:  SKFEGASLHCSFSKFEGASLHCSFSKFEGASLHYYFSKFEGASLYCSFSKFEGASLHYSFSKFEGASLRCSFSKFEGASLRCSFSKFEGASLH--CSPFE
        +KF G  +H + +KF G+++H + +KF G+ + + ++ + G+ +  + +KF G++++++ S F G+++  S ++F G     + +   G  L+   + F 
Subjt:  SKFEGASLHCSFSKFEGASLHCSFSKFEGASLHYYFSKFEGASLYCSFSKFEGASLHYSFSKFEGASLRCSFSKFEGASLRCSFSKFEGASLH--CSPFE

Query:  GSPLRFSFSKFEGSPL
        GS + FS ++F G  L
Subjt:  GSPLRFSFSKFEGSPL

WP_220492371.1 pentapeptide repeat-containing protein [Propioniciclava sp. MC1683]1.9e-0424.84Show/hide
Query:  SSKFEGSLTSFARSFSKFEGASLHCSFSKFEGASLHCSFSKFEGASLHYYFSKFEGASLYCSFSKFEGASLHYSFSKFEGASLRCSFSKFEGASLRCSFS
        S++F G    F R  ++F G ++   ++ F G ++    ++F G ++H+  ++F G +++ + ++F G ++H+  ++F G ++  + +KF G+++  + +
Subjt:  SSKFEGSLTSFARSFSKFEGASLHCSFSKFEGASLHCSFSKFEGASLHYYFSKFEGASLYCSFSKFEGASLHYSFSKFEGASLRCSFSKFEGASLRCSFS

Query:  KFEGASLHC--SPFEGSPLRFSFSKFEGSPLLLFKCLVAVDGLVPLHLQMLAV
        KF G ++H   + F G  + F  ++F G   + F   V   G V    + LAV
Subjt:  KFEGASLHC--SPFEGSPLRFSFSKFEGSPLLLFKCLVAVDGLVPLHLQMLAV

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCCTACCCTCTTCATGGCACGAGAGGGATTTCTGTTTGCTGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGCACTGCGGAGAACCAAGGAATTTTGGCGAAG
CAATTCAAGAATTCTTCAAGGATTTAGGATCACATCGTCTATACCATCTATAAAGTGGGCCGCGTCTCATAGTGTCTCCAGAATAAGTTCCGTTTCTCCAAGTACGAAGG
TGCTCCTTCTCCAAGTACGAAGGTGCTCCTTCTCCAAGTTCGAAGGCTCTTACATTGCTGCGATGCAGTTCCTCCTCTCCAAGTTCAAAGGTTCTCACGCGTTCCGCTAC
AATTCCTTCTCTCCAAGTACGAAGGTTCTCTTCTCCAAGTCGAAGGTTCTCACGTTGCTTCACTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAG
GTTTTCATGCGCTTTGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCATTTCGCTACAGTTCATTTCCTCTAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAG
ATCCTTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCACACGCTGCACTTCGTTGCAGTTCCTTCC
TCCAAGTTCGAAGGTTCTCATGCGATTCACTGCGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACG
CGCTGCTGTAGTTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGAGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAG
GCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTACTACTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGC
GCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTCCTTCTCCAAGTTCGAAGGCGC
TTCTCTCCACTGCTCTCCTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTTGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGTGGCGGTTGACGGCCTCG
TTCCGCTTCATCTTCAAATGTTGGCAGTTGACGGCGTCTGCTTCGCTTCATCCTCAAAAATTGACTGTGATGAAGTCACTGCAAGTGAATCTGATGACGACCGTTGTAGG
CGAGTCGAGTCTGGTGACCACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGTTACTCAGATCACC
CAATAAAATGGGGACTAGTCTAGCAGGAGTGCATCATTGTAGGCAAATCTGGTCACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGC
AAATCTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCCCTACCCTCTTCATGGCACGAGAGGGATTTCTGTTTGCTGGTTGGACCACAAACAGGTTGTTCATTAGAGGAGCACTGCGGAGAACCAAGGAATTTTGGCGAAG
CAATTCAAGAATTCTTCAAGGATTTAGGATCACATCGTCTATACCATCTATAAAGTGGGCCGCGTCTCATAGTGTCTCCAGAATAAGTTCCGTTTCTCCAAGTACGAAGG
TGCTCCTTCTCCAAGTACGAAGGTGCTCCTTCTCCAAGTTCGAAGGCTCTTACATTGCTGCGATGCAGTTCCTCCTCTCCAAGTTCAAAGGTTCTCACGCGTTCCGCTAC
AATTCCTTCTCTCCAAGTACGAAGGTTCTCTTCTCCAAGTCGAAGGTTCTCACGTTGCTTCACTGCAGTTCCTTCCTCCAAGTTCGAAGTTCCTTCCTCCAAGTTCGAAG
GTTTTCATGCGCTTTGCTGCAGTTCCTTCTCTCCAAGTTCAAAGGTTCTCACGCATTTCGCTACAGTTCATTTCCTCTAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAG
ATCCTTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTTCGAAGGTTCTCACACGCTGCACTTCGTTGCAGTTCCTTCC
TCCAAGTTCGAAGGTTCTCATGCGATTCACTGCGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGCTTCGCTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACG
CGCTGCTGTAGTTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGAGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAG
GCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTACTACTTCTCCAAGTTCGAAGGCGCTTCTCTCTACTGCTCCTTCTCCAAGTTCGAAGGC
GCTTCTCTCCACTACTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGCTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCGTTGCTCCTTCTCCAAGTTCGAAGGCGC
TTCTCTCCACTGCTCTCCTTTTGAAGGTTCGCCACTGAGGTTCTCCTTCTCCAAGTTTGAAGGTTCACCGTTGCTCCTTTTCAAATGTTTGGTGGCGGTTGACGGCCTCG
TTCCGCTTCATCTTCAAATGTTGGCAGTTGACGGCGTCTGCTTCGCTTCATCCTCAAAAATTGACTGTGATGAAGTCACTGCAAGTGAATCTGATGACGACCGTTGTAGG
CGAGTCGAGTCTGGTGACCACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGCAAATCTGGTTACTCAGATCACC
CAATAAAATGGGGACTAGTCTAGCAGGAGTGCATCATTGTAGGCAAATCTGGTCACTCAGATCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGTAGGC
AAATCTGGTGA
Protein sequenceShow/hide protein sequence
MGPTLFMAREGFLFAGWTTNRLFIRGALRRTKEFWRSNSRILQGFRITSSIPSIKWAASHSVSRISSVSPSTKVLLLQVRRCSFSKFEGSYIAAMQFLLSKFKGSHAFRY
NSFSPSTKVLFSKSKVLTLLHCSSFLQVRSSFLQVRRFSCALLQFLLSKFKGSHAFRYSSFPLSSKVLTRFAADPFSLSSKVLTRFAAVPSSKFEGFEGSHTLHFVAVPS
SKFEGSHAIHCAVPSSKFEGSHALRCYLPPSSKVLSRAAVVPSSKFEGSLTSFARSFSKFEGASLHCSFSKFEGASLHCSFSKFEGASLHYYFSKFEGASLYCSFSKFEG
ASLHYSFSKFEGASLRCSFSKFEGASLRCSFSKFEGASLHCSPFEGSPLRFSFSKFEGSPLLLFKCLVAVDGLVPLHLQMLAVDGVCFASSSKIDCDEVTASESDDDRCR
RVESGDHPCRLLRSPNKMGTGLAGVHHCRQIWLLRSPNKMGTSLAGVHHCRQIWSLRSPNKMGTGLAGVHHCRQIW