; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011635 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011635
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationchr1:29576993..29586874
RNA-Seq ExpressionLag0011635
SyntenyLag0011635
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT88197.1 hypothetical protein VIGAN_05164300 [Vigna angularis var. angularis]2.1e-0663.27Show/hide
Query:  TPPNS---GVTCPPASALVHPRTTSYWERFRSDTICNAPGPRFGIRIRP
        +PP+S   GVTCPPA ALV PRTT YWER  SDTICNAP      R+ P
Subjt:  TPPNS---GVTCPPASALVHPRTTSYWERFRSDTICNAPGPRFGIRIRP

BAT91927.1 hypothetical protein VIGAN_07057100 [Vigna angularis var. angularis]5.5e-0753.85Show/hide
Query:  TPPNS---GVTCPPASALVHPRTTSYWERFRSDTICNAPGPRFGIRIRP-LTAPTFPCDLATLPY
        +PP+S   GVTCPPA ALV PRTT YWER  SDTICN P  R   R+ P +T     C L++L +
Subjt:  TPPNS---GVTCPPASALVHPRTTSYWERFRSDTICNAPGPRFGIRIRP-LTAPTFPCDLATLPY

KOM30956.1 hypothetical protein LR48_Vigan01g051100 [Vigna angularis]3.6e-0658.46Show/hide
Query:  DSRKDPSHSDVALVHS-----CT----PPNS--GVTCPPASALVHPRTTSYWERFRSDT-ICNAP
        DS  DP HS  A  HS     CT    PP+   GVTCPPASALV PRTT YWER  SDT  CN P
Subjt:  DSRKDPSHSDVALVHS-----CT----PPNS--GVTCPPASALVHPRTTSYWERFRSDT-ICNAP

KOM53026.1 hypothetical protein LR48_Vigan09g168500 [Vigna angularis]2.7e-0663.27Show/hide
Query:  TPPNS---GVTCPPASALVHPRTTSYWERFRSDTICNAPGPRFGIRIRP
        +PP+S    VTCPPASALV PRTT YWER  SDTICNAP      R+ P
Subjt:  TPPNS---GVTCPPASALVHPRTTSYWERFRSDTICNAPGPRFGIRIRP

TrEMBL top hitse value%identityAlignment
A0A0L9TKG5 Uncharacterized protein1.7e-0658.46Show/hide
Query:  DSRKDPSHSDVALVHS-----CT----PPNS--GVTCPPASALVHPRTTSYWERFRSDT-ICNAP
        DS  DP HS  A  HS     CT    PP+   GVTCPPASALV PRTT YWER  SDT  CN P
Subjt:  DSRKDPSHSDVALVHS-----CT----PPNS--GVTCPPASALVHPRTTSYWERFRSDT-ICNAP

A0A0L9VD91 Uncharacterized protein1.3e-0663.27Show/hide
Query:  TPPNS---GVTCPPASALVHPRTTSYWERFRSDTICNAPGPRFGIRIRP
        +PP+S    VTCPPASALV PRTT YWER  SDTICNAP      R+ P
Subjt:  TPPNS---GVTCPPASALVHPRTTSYWERFRSDTICNAPGPRFGIRIRP

A0A0S3S5W5 Uncharacterized protein1.0e-0663.27Show/hide
Query:  TPPNS---GVTCPPASALVHPRTTSYWERFRSDTICNAPGPRFGIRIRP
        +PP+S   GVTCPPA ALV PRTT YWER  SDTICNAP      R+ P
Subjt:  TPPNS---GVTCPPASALVHPRTTSYWERFRSDTICNAPGPRFGIRIRP

A0A0S3SGK4 Uncharacterized protein2.7e-0753.85Show/hide
Query:  TPPNS---GVTCPPASALVHPRTTSYWERFRSDTICNAPGPRFGIRIRP-LTAPTFPCDLATLPY
        +PP+S   GVTCPPA ALV PRTT YWER  SDTICN P  R   R+ P +T     C L++L +
Subjt:  TPPNS---GVTCPPASALVHPRTTSYWERFRSDTICNAPGPRFGIRIRP-LTAPTFPCDLATLPY

A0A5A7U2P4 Integrase catalytic domain-containing protein6.1e-0464.52Show/hide
Query:  SINLPLWGQDQVDSWGHSHARWNSLLPVFRD
        S+ L  WGQD+V+SW H+H RWNSLLP FR+
Subjt:  SINLPLWGQDQVDSWGHSHARWNSLLPVFRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGTCCGCTTTACCATGATAGAGGATGTGATGTTAGCGGTTCCACAAGTTTGCACACGGGCATTGGCTTGGCAGTTATGCAAGGTGTGTGGTGGAAGTTATGTCG
ATGGCTGAAGAACTTCCAGGACATAAAACCCAACAGGAAGCACATGCTTATTTGTAATGCCTCGGAATTTCCAGGTTCGAAAGTAGATTTTGTTTGGGAGGTTGTTGGTT
GTGTGGTTGCGTTGGTTGCTAATTCAGGATTTAAGGAAAGACACTTTTACTACTCGCCCCTTCCCTGTGGATCTGACCCTCGAATACTCCAGGGCTTGCTGCACGCTAGA
GATGGCAGGTGGAGAAGAGAGCCATGGGAGGTGAGAGTGGCCCATAAGCGCCGCTCAATAAACCTGCCACTTTGGGGACAAGACCAAGTAGATAGCTGGGGACATAGTCA
TGCAAGATGGAATTCACTCCTACCCGTCTTTAGGGATAGTAGAAAGGATCCATCTCATTCGGATGTGGCCTTGGTTCATTCATGTACCCCTCCTAACTCGGGTGTTACAT
GCCCACCAGCTTCCGCCTTGGTTCATCCCCGAACCACATCCTACTGGGAGAGGTTCCGCTCTGATACCATTTGTAACGCCCCAGGCCCAAGATTCGGAATTCGGATTCGG
CCCTTGACGGCCCCGACATTCCCCTGCGACCTTGCCACGTTACCATACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTGTCCGCTTTACCATGATAGAGGATGTGATGTTAGCGGTTCCACAAGTTTGCACACGGGCATTGGCTTGGCAGTTATGCAAGGTGTGTGGTGGAAGTTATGTCG
ATGGCTGAAGAACTTCCAGGACATAAAACCCAACAGGAAGCACATGCTTATTTGTAATGCCTCGGAATTTCCAGGTTCGAAAGTAGATTTTGTTTGGGAGGTTGTTGGTT
GTGTGGTTGCGTTGGTTGCTAATTCAGGATTTAAGGAAAGACACTTTTACTACTCGCCCCTTCCCTGTGGATCTGACCCTCGAATACTCCAGGGCTTGCTGCACGCTAGA
GATGGCAGGTGGAGAAGAGAGCCATGGGAGGTGAGAGTGGCCCATAAGCGCCGCTCAATAAACCTGCCACTTTGGGGACAAGACCAAGTAGATAGCTGGGGACATAGTCA
TGCAAGATGGAATTCACTCCTACCCGTCTTTAGGGATAGTAGAAAGGATCCATCTCATTCGGATGTGGCCTTGGTTCATTCATGTACCCCTCCTAACTCGGGTGTTACAT
GCCCACCAGCTTCCGCCTTGGTTCATCCCCGAACCACATCCTACTGGGAGAGGTTCCGCTCTGATACCATTTGTAACGCCCCAGGCCCAAGATTCGGAATTCGGATTCGG
CCCTTGACGGCCCCGACATTCCCCTGCGACCTTGCCACGTTACCATACTAG
Protein sequenceShow/hide protein sequence
MVCPLYHDRGCDVSGSTSLHTGIGLAVMQGVWWKLCRWLKNFQDIKPNRKHMLICNASEFPGSKVDFVWEVVGCVVALVANSGFKERHFYYSPLPCGSDPRILQGLLHAR
DGRWRREPWEVRVAHKRRSINLPLWGQDQVDSWGHSHARWNSLLPVFRDSRKDPSHSDVALVHSCTPPNSGVTCPPASALVHPRTTSYWERFRSDTICNAPGPRFGIRIR
PLTAPTFPCDLATLPY