| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0043220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 3.6e-73 | 35.6 | Show/hide |
Query: ENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTVRGRSETRSNQSKN-------------------------
E + DENQA+ILLNSLPE+Y+E++ AIKYGRDSL+MS+VL+AL+++ LE + + K E L RGRSE +S + K+
Subjt: ENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTVRGRSETRSNQSKN-------------------------
Query: TKKDHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGY
T + EVL V+ D + WI+DSGC++HMTP++ + + ++ + GKVL+G+N C +KG GS++++ DG +IL++ YV LKRNLISL LD++G
Subjt: TKKDHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGY
Query: KYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISE------RGLVELSKQGEIRCIISRDVKFNEEE-----
KSE G+MK+ KGSL+K+ T ++G+Y L GTT G V IA + + + +++WHKRLAH + R + L + + ++ F + E
Subjt: KYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISE------RGLVELSKQGEIRCIISRDVKFNEEE-----
Query: -----MPWESEGSFNYQKTKLEIE------------TSF----DIELENEDQNISPEGSSQATN--EQFDHNTGNTEVLQEIDSVNQN--------IQAQ
P ++ + + +T +E + T++ D +L G Q + + G + + DS + I+
Subjt: -----MPWESEGSFNYQKTKLEIE------------TSF----DIELENEDQNISPEGSSQATN--EQFDHNTGNTEVLQEIDSVNQN--------IQAQ
Query: NTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDC
++ +L NYQLT D+ +R R+ YA D AYAL +EP ++ +A+ S+ K +W +AM E SL KN+ W LV P K++
Subjt: NTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDC
Query: KWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSPWLDI
K +YKIK S G++KPR+KARLVAK +TQ+ GVD+ EIFSP +D+
Subjt: KWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSPWLDI
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| KAA0067607.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 6.6e-75 | 32.06 | Show/hide |
Query: EVLSDAEEFYLLHFLIGDERRGREFVIVRLKLLRINSLLASFPLVRFNLNKRYGVKTRENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNA
E+ E YL FL E+ R + + + K L N L F + +L+ E + DENQA+ILLNSLPE+Y+E++AAIKYGRDSL+MS+VL+A
Subjt: EVLSDAEEFYLLHFLIGDERRGREFVIVRLKLLRINSLLASFPLVRFNLNKRYGVKTRENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNA
Query: LRSKELESRPQKKETEALTVRGRSE-------TRSNQSKNTKK--------------------------------------------DHTEVLAVTEIDP
L+++ LE + ++K+ E L RGRSE RS++SK+ K + EVL V+ D
Subjt: LRSKELESRPQKKETEALTVRGRSE-------TRSNQSKNTKK--------------------------------------------DHTEVLAVTEIDP
Query: TEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGYKYKSEGGIMKIYKGSL
+ WI+DSGC++HMTPH+ + + + +GGKVL+G+N C++K GS++++ D +IL++VRYV LKRNLISLG LD++G KSE G+MK+ KGSL
Subjt: TEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGYKYKSEGGIMKIYKGSL
Query: LKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGLVELSKQGEIRCIISRDVKFNE-----------------------------
+K+ GTL++G+Y L GTT G IA+ + ++WH RLAH+SERGL LS+QG + + + ++ F E
Subjt: LKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGLVELSKQGEIRCIISRDVKFNE-----------------------------
Query: -----------------------EEMPW--------ESEGSFNYQKTKLEIETSFDIELEN------------EDQNIS-----------PEGSSQATNE
W E+ G F K ++E +T L++ +D ++ P+G + +
Subjt: -----------------------EEMPW--------ESEGSFNYQKTKLEIETSFDIELEN------------EDQNIS-----------PEGSSQATNE
Query: Q-FDHNTGNTEVLQE-------------------IDSVNQN-------------------IQAQNTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAF
Q DH + E I+ Q+ I+ ++ +L NYQLTRDR +R R+ YA
Subjt: Q-FDHNTGNTEVLQE-------------------IDSVNQN-------------------IQAQNTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAF
Query: DAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYT
D AYAL +P ++ +A+ S+ K W + M E+ SL KN+TW LV P K++ KW+YKIK G++KPR+KARLVAK +TQ+ GVD+
Subjt: DAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYT
Query: EIFSP
E+FSP
Subjt: EIFSP
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| RVW35472.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 5.9e-76 | 37.31 | Show/hide |
Query: ENID----DENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKET--EALTVRGRS--------ETRSNQSKNTKK--------
ENID DE++AI+LL SL SY ++ AI YGRD+L+ + V + L ++EL+ + KE E L +RG+ + R N K T
Subjt: ENID----DENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKET--EALTVRGRS--------ETRSNQSKNTKK--------
Query: ---DHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGY
D EVL V E+D ++EWILDS CS+HM P K +F D K+++GG VL+GNN+ C+I GIG++R+ DG ++L VRY+ LKRNLISLG LDK GY
Subjt: ---DHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGY
Query: KYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGLVELSKQGEI------------RCIISRDVKFNEE
+KSE +++ + SL M T+KNG+YTL G T G V+I + +WH+RL HIS RGL EL KQ + C+ + +
Subjt: KYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGLVELSKQGEI------------RCIISRDVKFNEE
Query: EMPWESEGSFNYQKTKL-------EIETSFDIELENEDQNISP-----EGSSQATNEQFDHNTGNTEVLQEIDS--VNQNIQAQNTEE---NLANYQLTR
+ E++ +Y + L I + D+ +D + EG Q E +H T E +E S V + I + +E L +Y L R
Subjt: EMPWESEGSFNYQKTKL-------EIETSFDIELENEDQNISP-----EGSSQATNEQFDHNTGNTEVLQEIDS--VNQNIQAQNTEE---NLANYQLTR
Query: DRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGD
DRQKR +KP R+ + +AL + + E +Y +A+NS ++W +A+ +EM SL KN+TW+LV P+ VV KW+++ K G+
Subjt: DRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGD
Query: NKPRFKARLVAKWFTQEYGVDYTEIFSP
PR+KARLVAK F+Q+ V Y EIFSP
Subjt: NKPRFKARLVAKWFTQEYGVDYTEIFSP
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| TYK21344.1 retrotransposon protein, putative, Ty1-copia subclass [Cucumis melo var. makuwa] | 3.6e-73 | 35.6 | Show/hide |
Query: ENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTVRGRSETRSNQSKN-------------------------
E + DENQA+ILLNSLPE+Y+E++ AIKYGRDSL+MS+VL+AL+++ LE + + K E L RGRSE +S + K+
Subjt: ENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTVRGRSETRSNQSKN-------------------------
Query: TKKDHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGY
T + EVL V+ D + WI+DSGC++HMTP++ + + ++ + GKVL+G+N C +KG GS++++ DG +IL++ YV LKRNLISL LD++G
Subjt: TKKDHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGY
Query: KYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISE------RGLVELSKQGEIRCIISRDVKFNEEE-----
KSE G+MK+ KGSL+K+ T ++G+Y L GTT G V IA + + + +++WHKRLAH + R + L + + ++ F + E
Subjt: KYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISE------RGLVELSKQGEIRCIISRDVKFNEEE-----
Query: -----MPWESEGSFNYQKTKLEIE------------TSF----DIELENEDQNISPEGSSQATN--EQFDHNTGNTEVLQEIDSVNQN--------IQAQ
P ++ + + +T +E + T++ D +L G Q + + G + + DS + I+
Subjt: -----MPWESEGSFNYQKTKLEIE------------TSF----DIELENEDQNISPEGSSQATN--EQFDHNTGNTEVLQEIDSVNQN--------IQAQ
Query: NTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDC
++ +L NYQLT D+ +R R+ YA D AYAL +EP ++ +A+ S+ K +W +AM E SL KN+ W LV P K++
Subjt: NTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDC
Query: KWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSPWLDI
K +YKIK S G++KPR+KARLVAK +TQ+ GVD+ EIFSP +D+
Subjt: KWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSPWLDI
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| TYK25306.1 putative gag-pol polyprotein [Cucumis melo var. makuwa] | 4.9e-70 | 28.34 | Show/hide |
Query: ENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTVRGRSETRS------------------------------
E + DENQA+ILLNSLPE+Y+E++AAIKYGRDSL+MS+VL+AL+++ LE + ++K+ E L RGRSE +S
Subjt: ENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTVRGRSETRS------------------------------
Query: ----NQSK-------------------------NTKKDHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRL
N+S+ T + EVL V+ D + WI+DSGC++HMTPH+ + + + ++GGKVL+G+N C++KG GS+++
Subjt: ----NQSK-------------------------NTKKDHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRL
Query: SLTDGSYKILSSVRYVQALKRNLISLGTLDKAGYKYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGL
+ DG +IL++VRYV LKRNLISLG LD++G KSE G+MK+ KGSL+K+ GTL++G+Y L GTT G IA+ + + +++WHKRLAH+SERGL
Subjt: SLTDGSYKILSSVRYVQALKRNLISLGTLDKAGYKYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGL
Query: VELSKQGEI-------------------------------------------------------------------------------------------
LS+QG +
Subjt: VELSKQGEI-------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------RCIISRDVKFNEEEMPW-------ESEGSFNYQKTKLEIETSFD
+CIISRDV FNE EMP+ + G + ++ E
Subjt: --------------------------------------------------------RCIISRDVKFNEEEMPW-------ESEGSFNYQKTKLEIETSFD
Query: IELENEDQNISPEGSSQATNEQFDHNTGNTEVLQEIDSVNQNIQAQNTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEP
I+L+N+ +S +Q +FD E + + I+ ++ +L NYQLTRDR +R R+ YAD A AA DS E +EP
Subjt: IELENEDQNISPEGSSQATNEQFDHNTGNTEVLQEIDSVNQNIQAQNTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEP
Query: TSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
++ +A+ S+ K +W +AM +E+ SL KN+TW LV P K++ KW+YKIK G++KPR+KARLVAK +TQ+ GVD+ EIFSP
Subjt: TSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438DJ20 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.9e-76 | 37.31 | Show/hide |
Query: ENID----DENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKET--EALTVRGRS--------ETRSNQSKNTKK--------
ENID DE++AI+LL SL SY ++ AI YGRD+L+ + V + L ++EL+ + KE E L +RG+ + R N K T
Subjt: ENID----DENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKET--EALTVRGRS--------ETRSNQSKNTKK--------
Query: ---DHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGY
D EVL V E+D ++EWILDS CS+HM P K +F D K+++GG VL+GNN+ C+I GIG++R+ DG ++L VRY+ LKRNLISLG LDK GY
Subjt: ---DHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGY
Query: KYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGLVELSKQGEI------------RCIISRDVKFNEE
+KSE +++ + SL M T+KNG+YTL G T G V+I + +WH+RL HIS RGL EL KQ + C+ + +
Subjt: KYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGLVELSKQGEI------------RCIISRDVKFNEE
Query: EMPWESEGSFNYQKTKL-------EIETSFDIELENEDQNISP-----EGSSQATNEQFDHNTGNTEVLQEIDS--VNQNIQAQNTEE---NLANYQLTR
+ E++ +Y + L I + D+ +D + EG Q E +H T E +E S V + I + +E L +Y L R
Subjt: EMPWESEGSFNYQKTKL-------EIETSFDIELENEDQNISP-----EGSSQATNEQFDHNTGNTEVLQEIDS--VNQNIQAQNTEE---NLANYQLTR
Query: DRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGD
DRQKR +KP R+ + +AL + + E +Y +A+NS ++W +A+ +EM SL KN+TW+LV P+ VV KW+++ K G+
Subjt: DRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGD
Query: NKPRFKARLVAKWFTQEYGVDYTEIFSP
PR+KARLVAK F+Q+ V Y EIFSP
Subjt: NKPRFKARLVAKWFTQEYGVDYTEIFSP
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| A0A5A7TIS5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.7e-73 | 35.6 | Show/hide |
Query: ENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTVRGRSETRSNQSKN-------------------------
E + DENQA+ILLNSLPE+Y+E++ AIKYGRDSL+MS+VL+AL+++ LE + + K E L RGRSE +S + K+
Subjt: ENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTVRGRSETRSNQSKN-------------------------
Query: TKKDHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGY
T + EVL V+ D + WI+DSGC++HMTP++ + + ++ + GKVL+G+N C +KG GS++++ DG +IL++ YV LKRNLISL LD++G
Subjt: TKKDHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGY
Query: KYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISE------RGLVELSKQGEIRCIISRDVKFNEEE-----
KSE G+MK+ KGSL+K+ T ++G+Y L GTT G V IA + + + +++WHKRLAH + R + L + + ++ F + E
Subjt: KYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISE------RGLVELSKQGEIRCIISRDVKFNEEE-----
Query: -----MPWESEGSFNYQKTKLEIE------------TSF----DIELENEDQNISPEGSSQATN--EQFDHNTGNTEVLQEIDSVNQN--------IQAQ
P ++ + + +T +E + T++ D +L G Q + + G + + DS + I+
Subjt: -----MPWESEGSFNYQKTKLEIE------------TSF----DIELENEDQNISPEGSSQATN--EQFDHNTGNTEVLQEIDSVNQN--------IQAQ
Query: NTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDC
++ +L NYQLT D+ +R R+ YA D AYAL +EP ++ +A+ S+ K +W +AM E SL KN+ W LV P K++
Subjt: NTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDC
Query: KWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSPWLDI
K +YKIK S G++KPR+KARLVAK +TQ+ GVD+ EIFSP +D+
Subjt: KWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSPWLDI
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| A0A5A7VKC2 Retrotransposon protein, putative, Ty1-copia subclass | 3.2e-75 | 32.06 | Show/hide |
Query: EVLSDAEEFYLLHFLIGDERRGREFVIVRLKLLRINSLLASFPLVRFNLNKRYGVKTRENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNA
E+ E YL FL E+ R + + + K L N L F + +L+ E + DENQA+ILLNSLPE+Y+E++AAIKYGRDSL+MS+VL+A
Subjt: EVLSDAEEFYLLHFLIGDERRGREFVIVRLKLLRINSLLASFPLVRFNLNKRYGVKTRENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNA
Query: LRSKELESRPQKKETEALTVRGRSE-------TRSNQSKNTKK--------------------------------------------DHTEVLAVTEIDP
L+++ LE + ++K+ E L RGRSE RS++SK+ K + EVL V+ D
Subjt: LRSKELESRPQKKETEALTVRGRSE-------TRSNQSKNTKK--------------------------------------------DHTEVLAVTEIDP
Query: TEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGYKYKSEGGIMKIYKGSL
+ WI+DSGC++HMTPH+ + + + +GGKVL+G+N C++K GS++++ D +IL++VRYV LKRNLISLG LD++G KSE G+MK+ KGSL
Subjt: TEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGYKYKSEGGIMKIYKGSL
Query: LKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGLVELSKQGEIRCIISRDVKFNE-----------------------------
+K+ GTL++G+Y L GTT G IA+ + ++WH RLAH+SERGL LS+QG + + + ++ F E
Subjt: LKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGLVELSKQGEIRCIISRDVKFNE-----------------------------
Query: -----------------------EEMPW--------ESEGSFNYQKTKLEIETSFDIELEN------------EDQNIS-----------PEGSSQATNE
W E+ G F K ++E +T L++ +D ++ P+G + +
Subjt: -----------------------EEMPW--------ESEGSFNYQKTKLEIETSFDIELEN------------EDQNIS-----------PEGSSQATNE
Query: Q-FDHNTGNTEVLQE-------------------IDSVNQN-------------------IQAQNTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAF
Q DH + E I+ Q+ I+ ++ +L NYQLTRDR +R R+ YA
Subjt: Q-FDHNTGNTEVLQE-------------------IDSVNQN-------------------IQAQNTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAF
Query: DAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYT
D AYAL +P ++ +A+ S+ K W + M E+ SL KN+TW LV P K++ KW+YKIK G++KPR+KARLVAK +TQ+ GVD+
Subjt: DAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYT
Query: EIFSP
E+FSP
Subjt: EIFSP
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| A0A5D3DCM9 Retrotransposon protein, putative, Ty1-copia subclass | 1.7e-73 | 35.6 | Show/hide |
Query: ENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTVRGRSETRSNQSKN-------------------------
E + DENQA+ILLNSLPE+Y+E++ AIKYGRDSL+MS+VL+AL+++ LE + + K E L RGRSE +S + K+
Subjt: ENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTVRGRSETRSNQSKN-------------------------
Query: TKKDHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGY
T + EVL V+ D + WI+DSGC++HMTP++ + + ++ + GKVL+G+N C +KG GS++++ DG +IL++ YV LKRNLISL LD++G
Subjt: TKKDHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGY
Query: KYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISE------RGLVELSKQGEIRCIISRDVKFNEEE-----
KSE G+MK+ KGSL+K+ T ++G+Y L GTT G V IA + + + +++WHKRLAH + R + L + + ++ F + E
Subjt: KYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISE------RGLVELSKQGEIRCIISRDVKFNEEE-----
Query: -----MPWESEGSFNYQKTKLEIE------------TSF----DIELENEDQNISPEGSSQATN--EQFDHNTGNTEVLQEIDSVNQN--------IQAQ
P ++ + + +T +E + T++ D +L G Q + + G + + DS + I+
Subjt: -----MPWESEGSFNYQKTKLEIE------------TSF----DIELENEDQNISPEGSSQATN--EQFDHNTGNTEVLQEIDSVNQN--------IQAQ
Query: NTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDC
++ +L NYQLT D+ +R R+ YA D AYAL +EP ++ +A+ S+ K +W +AM E SL KN+ W LV P K++
Subjt: NTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDC
Query: KWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSPWLDI
K +YKIK S G++KPR+KARLVAK +TQ+ GVD+ EIFSP +D+
Subjt: KWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSPWLDI
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| A0A5D3DNU1 Putative gag-pol polyprotein | 2.4e-70 | 28.34 | Show/hide |
Query: ENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTVRGRSETRS------------------------------
E + DENQA+ILLNSLPE+Y+E++AAIKYGRDSL+MS+VL+AL+++ LE + ++K+ E L RGRSE +S
Subjt: ENIDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTVRGRSETRS------------------------------
Query: ----NQSK-------------------------NTKKDHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRL
N+S+ T + EVL V+ D + WI+DSGC++HMTPH+ + + + ++GGKVL+G+N C++KG GS+++
Subjt: ----NQSK-------------------------NTKKDHTEVLAVTEIDPTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSIRL
Query: SLTDGSYKILSSVRYVQALKRNLISLGTLDKAGYKYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGL
+ DG +IL++VRYV LKRNLISLG LD++G KSE G+MK+ KGSL+K+ GTL++G+Y L GTT G IA+ + + +++WHKRLAH+SERGL
Subjt: SLTDGSYKILSSVRYVQALKRNLISLGTLDKAGYKYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGL
Query: VELSKQGEI-------------------------------------------------------------------------------------------
LS+QG +
Subjt: VELSKQGEI-------------------------------------------------------------------------------------------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: --------------------------------------------------------RCIISRDVKFNEEEMPW-------ESEGSFNYQKTKLEIETSFD
+CIISRDV FNE EMP+ + G + ++ E
Subjt: --------------------------------------------------------RCIISRDVKFNEEEMPW-------ESEGSFNYQKTKLEIETSFD
Query: IELENEDQNISPEGSSQATNEQFDHNTGNTEVLQEIDSVNQNIQAQNTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEP
I+L+N+ +S +Q +FD E + + I+ ++ +L NYQLTRDR +R R+ YAD A AA DS E +EP
Subjt: IELENEDQNISPEGSSQATNEQFDHNTGNTEVLQEIDSVNQNIQAQNTEENLANYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEP
Query: TSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
++ +A+ S+ K +W +AM +E+ SL KN+TW LV P K++ KW+YKIK G++KPR+KARLVAK +TQ+ GVD+ EIFSP
Subjt: TSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 9.7e-13 | 27.39 | Show/hide |
Query: SKQGEIRCIISRDVKFNEEEMPWESEGSFNYQKTKLEIETS----FDIELENEDQNISPEGSSQATNEQFDHNTGNTEVLQEIDSVNQNIQAQNTEENLA
SK+ E + + K + E P ES+ N Q K E++ + + D +++ S NE + T E L+EI N +N
Subjt: SKQGEIRCIISRDVKFNEEEMPWESEGSFNYQKTKLEIETS----FDIELENEDQNISPEGSSQATNEQFDHNTGNTEVLQEIDSVNQNIQAQNTEENLA
Query: NYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIK
+ R ++ KP ++ D +++ A+ +F N P S+++ + K+ W EA+ E+++ + N TW + + PE +VD +W++ +K
Subjt: NYQLTRDRQKRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIK
Query: ASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSPWLDILQF
+ G N R+KARLVA+ FTQ+Y +DY E F+P I F
Subjt: ASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSPWLDILQF
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.3e-20 | 28.62 | Show/hide |
Query: IDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTV--RGRSETRSN----------QSKNTKK------------
I++E++AI+LLNSLP SY + I +G+ ++ + V +AL E + + + +AL RGRS RS+ +SKN K
Subjt: IDDENQAIILLNSLPESYKEIRAAIKYGRDSLSMSLVLNALRSKELESRPQKKETEALTV--RGRSETRSN----------QSKNTKK------------
Query: -----------------------DHTE---------VLAVTEID-------PTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSI
D+T VL + E + P EW++D+ S+H TP + F + G V MGN +I GIG I
Subjt: -----------------------DHTE---------VLAVTEID-------PTEEWILDSGCSYHMTPHKHYFMDLKDLNGGKVLMGNNQQCEIKGIGSI
Query: RLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGYKYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISER
+ G +L VR+V L+ NLIS LD+ GY+ ++ KGSL+ G + +Y N G++ A + +WHKR+ H+SE+
Subjt: RLSLTDGSYKILSSVRYVQALKRNLISLGTLDKAGYKYKSEGGIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISER
Query: GLVELSKQGEI
GL L+K+ I
Subjt: GLVELSKQGEI
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.5e-17 | 31.86 | Show/hide |
Query: RCIISRDVKFNEEEMPWESEGSFNYQKTKLEIETSFDIELENEDQNISPEGSSQATNEQFDHNTGNTEVLQEIDSVNQNI-QAQNTEENLANYQLTRDRQ
+ I SRDV F E E+ ++ S +K K I +F + + + N P + T+E + EV+++ + +++ + + ++ + +Q
Subjt: RCIISRDVKFNEEEMPWESEGSFNYQKTKLEIETSFDIELENEDQNISPEGSSQATNEQFDHNTGNTEVLQEIDSVNQNI-QAQNTEENLANYQLTRDRQ
Query: KRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNK-
PL R + + + Y L DD EP S + ++ KN+ +AM +EM SL+KN T+KLVELP+G + + CKW++K+K GD K
Subjt: KRVIKPLARFDYADCNMDAFDAAAYALFYDDSFENSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNK-
Query: PRFKARLVAKWFTQEYGVDYTEIFSP
R+KARLV K F Q+ G+D+ EIFSP
Subjt: PRFKARLVAKWFTQEYGVDYTEIFSP
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.0e-10 | 45.21 | Show/hide |
Query: WFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
W +AM +E+ +L +NKTW LV P ++ CKW++K K G R KARLVAK F QE G+ + E +SP
Subjt: WFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 6.5e-09 | 41.76 | Show/hide |
Query: SEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGH-KVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
SEP + QA+ E W AM E+++ N TW LV P H +V C+W++ K + G + R+KARLVAK + Q G+DY E FSP
Subjt: SEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGH-KVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.4e-08 | 41.3 | Show/hide |
Query: NSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLV-ELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
NSEP + QAM + W +AM E+++ N TW LV P +V C+W++ K + G + R+KARLVAK + Q G+DY E FSP
Subjt: NSEPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLV-ELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 1.8e-14 | 44.94 | Show/hide |
Query: EPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
EP++YN+A + W AM DE+ ++E TW++ LP K + CKW+YKIK + G + R+KARLVAK +TQ+ G+D+ E FSP
Subjt: EPTSYNQAMNSEHKNEWFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 5.3e-06 | 32.93 | Show/hide |
Query: GIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGLVELSKQGEIRCIISRDVKFNEE
G++K+ KG + G + +Y L G+ G+ +A T + +E +WH RLAH+S+RG+ L K+G + +KF E+
Subjt: GIMKIYKGSLLKMTGTLKNGVYTLNGTTSIGDVTIATTVETNNEAIIWHKRLAHISERGLVELSKQGEIRCIISRDVKFNEE
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 1.4e-11 | 45.21 | Show/hide |
Query: WFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
W +AM +E+ +L +NKTW LV P ++ CKW++K K G R KARLVAK F QE G+ + E +SP
Subjt: WFEAMVDEMSSLEKNKTWKLVELPEGHKVVDCKWLYKIKASLKGDNKPRFKARLVAKWFTQEYGVDYTEIFSP
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