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Lag0011671 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011671
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncell division cycle 20.2, cofactor of APC complex-like
Genome locationchr1:30374676..30377854
RNA-Seq ExpressionLag0011671
SyntenyLag0011671
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MCH93279.1 hypothetical protein [Trifolium medium]1.1e-0450.91Show/hide
Query:  LDIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEKEVLKAFEEPKNTSDT
        LDI+EN  +P++L RPFLATGR +ID+ER EL++R+ +E+   K FE  K+   T
Subjt:  LDIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEKEVLKAFEEPKNTSDT

XP_015970840.1 uncharacterized protein LOC107494294 [Arachis duranensis]1.1e-0453.45Show/hide
Query:  DIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEK---EVLKAFEEPKNTSDTM
        DIKE+P  PIIL RPFLATGR +ID+E+ EL++RV  E     V K   EP    D M
Subjt:  DIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEK---EVLKAFEEPKNTSDTM

XP_027344469.1 uncharacterized protein LOC113856881 [Abrus precatorius]1.1e-0453.7Show/hide
Query:  LDIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEKEVLKAFEEPKNTSD
        LD++ +  +PIIL RPFLATGR +ID+++ EL++RVQ EK  L  FE  K+ SD
Subjt:  LDIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEKEVLKAFEEPKNTSD

XP_027351287.1 uncharacterized protein LOC113862397 [Abrus precatorius]6.4e-0550Show/hide
Query:  LDIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEKEVLKAFEEPKNTSDTM
        LD+K +  +P+IL RPFLA GR +ID+++ EL++RVQ+EK +   FE  K+ SD M
Subjt:  LDIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEKEVLKAFEEPKNTSDTM

XP_030502340.1 uncharacterized protein LOC115717494 [Cannabis sativa]8.3e-0558.7Show/hide
Query:  LDIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEKEVLKAF
        LD++E+  +PIIL RPFLATGR +ID+++REL +RVQ+E+E  K F
Subjt:  LDIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEKEVLKAF

TrEMBL top hitse value%identityAlignment
A0A392N252 Uncharacterized protein (Fragment)5.3e-0550.91Show/hide
Query:  LDIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEKEVLKAFEEPKNTSDT
        LDI+EN  +P++L RPFLATGR +ID+ER EL++R+ +E+   K FE  K+   T
Subjt:  LDIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEKEVLKAFEEPKNTSDT

A0A445D5N2 Uncharacterized protein3.4e-0462.5Show/hide
Query:  LDIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEK
        L+I ENP  PIILERPFLAT R +ID+ER EL++R+  E+
Subjt:  LDIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEK

A0A5A7QU30 Transducin family protein / WD-40 repeat family protein4.5e-0461.36Show/hide
Query:  QLQLDRFISNRSAMDFNYAHYMVTEGRKG----FAITGPIGKEY
        Q  LDRFI NRSAMDF+YAHYM+TEGRKG     A++ P  + Y
Subjt:  QLQLDRFISNRSAMDFNYAHYMVTEGRKG----FAITGPIGKEY

A0A6A4M2B2 WD_REPEATS_REGION domain-containing protein (Fragment)6.9e-0566.67Show/hide
Query:  LQLDRFISNRSAMDFNYAHYMVTEGRKGF---AITGPIGKEY
        LQLDRFI NRSAMDF+YAHYM+TEGRKG    A++ P  + Y
Subjt:  LQLDRFISNRSAMDFNYAHYMVTEGRKGF---AITGPIGKEY

A0A6P4DXT4 uncharacterized protein LOC1074942945.3e-0553.45Show/hide
Query:  DIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEK---EVLKAFEEPKNTSDTM
        DIKE+P  PIIL RPFLATGR +ID+E+ EL++RV  E     V K   EP    D M
Subjt:  DIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEK---EVLKAFEEPKNTSDTM

SwissProt top hitse value%identityAlignment
P49690 60S ribosomal protein L238.7e-0578.57Show/hide
Query:  KGFAITGPIGKEYVDLWPRITSAANPIM
        KG AITGPIGKE  DLWPRI SAAN I+
Subjt:  KGFAITGPIGKEYVDLWPRITSAANPIM

Q07760 60S ribosomal protein L238.7e-0578.57Show/hide
Query:  KGFAITGPIGKEYVDLWPRITSAANPIM
        KG AITGPIGKE  DLWPRI SAAN I+
Subjt:  KGFAITGPIGKEYVDLWPRITSAANPIM

Q9SZA4 Cell division cycle 20.1, cofactor of APC complex1.1e-0456.1Show/hide
Query:  LDRFISNRSAMDFNYAHYMVTEGRKG----FAITGPIGKEY
        LDRFI NRSAM+F+YAH+ +TEGRKG     A++ P  + Y
Subjt:  LDRFISNRSAMDFNYAHYMVTEGRKG----FAITGPIGKEY

Q9XEK8 60S ribosomal protein L239.6e-0480Show/hide
Query:  AITGPIGKEYVDLWPRITSAANPIM
        AITGPIGKE  DLWPRI SAAN I+
Subjt:  AITGPIGKEYVDLWPRITSAANPIM

Arabidopsis top hitse value%identityAlignment
AT1G04480.1 Ribosomal protein L14p/L23e family protein6.1e-0678.57Show/hide
Query:  KGFAITGPIGKEYVDLWPRITSAANPIM
        KG AITGPIGKE  DLWPRI SAAN I+
Subjt:  KGFAITGPIGKEYVDLWPRITSAANPIM

AT2G33370.1 Ribosomal protein L14p/L23e family protein6.1e-0678.57Show/hide
Query:  KGFAITGPIGKEYVDLWPRITSAANPIM
        KG AITGPIGKE  DLWPRI SAAN I+
Subjt:  KGFAITGPIGKEYVDLWPRITSAANPIM

AT3G04400.1 Ribosomal protein L14p/L23e family protein6.1e-0678.57Show/hide
Query:  KGFAITGPIGKEYVDLWPRITSAANPIM
        KG AITGPIGKE  DLWPRI SAAN I+
Subjt:  KGFAITGPIGKEYVDLWPRITSAANPIM

AT3G04400.2 Ribosomal protein L14p/L23e family protein6.1e-0678.57Show/hide
Query:  KGFAITGPIGKEYVDLWPRITSAANPIM
        KG AITGPIGKE  DLWPRI SAAN I+
Subjt:  KGFAITGPIGKEYVDLWPRITSAANPIM

AT4G33270.1 Transducin family protein / WD-40 repeat family protein8.0e-0656.1Show/hide
Query:  LDRFISNRSAMDFNYAHYMVTEGRKG----FAITGPIGKEY
        LDRFI NRSAM+F+YAH+ +TEGRKG     A++ P  + Y
Subjt:  LDRFISNRSAMDFNYAHYMVTEGRKG----FAITGPIGKEY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGAAAATGTTGATTCCTATGCCTGCACCTCTTGGCCTTGTCTTCCTTGGAAAATGCTAATCACTCGCATTCTCCCCTTCAAGAACAACATCTCCAGAAAAAGCAT
TCACAAGAAAATCGTTTTCTTTTTCCTCTTCCAATTACAGTTGGATAGATTTATTTCGAATCGATCGGCAATGGATTTCAATTATGCACACTACATGGTGACTGAAGGGA
GGAAAGGTTTTGCAATTACTGGTCCTATTGGAAAGGAGTATGTGGATTTATGGCCTAGGATCACAAGTGCAGCCAATCCTATCATGTTGTTGATAGTAAGTGTTATAAAA
GAAGATTTTTCTGAATTGTTAGTTGCTTTAATAGACTTTGCTGAATTTACAGCGAGAACTGTTGCAGATGATGAAATGGATATTCTCGAAAAGGAGCTTGAAGAGGAACT
TGATATTAAAGAGAATCCTGCTATGCCTATTATATTAGAGAGACCTTTCCTTGCTACAGGGAGAGTTATAATTGATATTGAGCGCAGGGAGCTAATCATCAGAGTTCAAC
AGGAGAAAGAGGTTTTAAAAGCTTTTGAGGAACCCAAGAACACATCAGATACCATGTTGGTGGGCTACAGGAGAGGTGCTAGGAAGAGCACCAGTGATGGAAAATCTGAC
AGGAGACCACCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGAAAATGTTGATTCCTATGCCTGCACCTCTTGGCCTTGTCTTCCTTGGAAAATGCTAATCACTCGCATTCTCCCCTTCAAGAACAACATCTCCAGAAAAAGCAT
TCACAAGAAAATCGTTTTCTTTTTCCTCTTCCAATTACAGTTGGATAGATTTATTTCGAATCGATCGGCAATGGATTTCAATTATGCACACTACATGGTGACTGAAGGGA
GGAAAGGTTTTGCAATTACTGGTCCTATTGGAAAGGAGTATGTGGATTTATGGCCTAGGATCACAAGTGCAGCCAATCCTATCATGTTGTTGATAGTAAGTGTTATAAAA
GAAGATTTTTCTGAATTGTTAGTTGCTTTAATAGACTTTGCTGAATTTACAGCGAGAACTGTTGCAGATGATGAAATGGATATTCTCGAAAAGGAGCTTGAAGAGGAACT
TGATATTAAAGAGAATCCTGCTATGCCTATTATATTAGAGAGACCTTTCCTTGCTACAGGGAGAGTTATAATTGATATTGAGCGCAGGGAGCTAATCATCAGAGTTCAAC
AGGAGAAAGAGGTTTTAAAAGCTTTTGAGGAACCCAAGAACACATCAGATACCATGTTGGTGGGCTACAGGAGAGGTGCTAGGAAGAGCACCAGTGATGGAAAATCTGAC
AGGAGACCACCCTGA
Protein sequenceShow/hide protein sequence
MQENVDSYACTSWPCLPWKMLITRILPFKNNISRKSIHKKIVFFFLFQLQLDRFISNRSAMDFNYAHYMVTEGRKGFAITGPIGKEYVDLWPRITSAANPIMLLIVSVIK
EDFSELLVALIDFAEFTARTVADDEMDILEKELEEELDIKENPAMPIILERPFLATGRVIIDIERRELIIRVQQEKEVLKAFEEPKNTSDTMLVGYRRGARKSTSDGKSD
RRPP