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Lag0011676 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011676
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr1:30563993..30564355
RNA-Seq ExpressionLag0011676
SyntenyLag0011676
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]6.8e-3057.39Show/hide
Query:  MYSLLLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGE
        +Y   +   S  +EF+E E   + HPHNDALV+ L IANAKVHRIL++GGS  D+ S TA+ AM LG + L+SSLTPL+GFGGERI P+G IELP+TF  
Subjt:  MYSLLLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGE

Query:  KPQTVIRMINFLVVD
        +P+++ RM++FLVVD
Subjt:  KPQTVIRMINFLVVD

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]2.1e-2653.91Show/hide
Query:  MYSLLLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGE
        +Y   + +    +EF E+E   I HPHNDALV+ L IANAKVH IL++GGS  D++S TA+  M LG   L+SS  PLVGFGGE + P G IELPVTFG 
Subjt:  MYSLLLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGE

Query:  KPQTVIRMINFLVVD
         P+++ +M++FLVVD
Subjt:  KPQTVIRMINFLVVD

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]6.4e-2858.49Show/hide
Query:  SPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGEKPQTVIRMI
        S  +EF+++    + HPHNDAL++ L IANAKVHRIL++GGS AD +S TA+ AM LG + L+SSLTPL+GFGGER+ P G IELPVTF   P+++ +M+
Subjt:  SPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGEKPQTVIRMI

Query:  NFLVVD
        +FLVVD
Subjt:  NFLVVD

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]4.1e-2754.78Show/hide
Query:  MYSLLLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGE
        +Y   +      +EF+E E   + HPHNDALV+ L IAN KVHRIL++GGS AD++S TA+ AM LG   L+SS  PLVGFGGER+   G IELPVTFG 
Subjt:  MYSLLLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGE

Query:  KPQTVIRMINFLVVD
         P++V +M++FLVV+
Subjt:  KPQTVIRMINFLVVD

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]2.4e-2756.36Show/hide
Query:  LLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGEKPQT
        ++ +    LEF+E+E   + HPHNDALV+ L IANAKVHRIL++GGS   ++S TA+ AM LG   L+SS  PLVGFGGER+ P G IELPV FG  P++
Subjt:  LLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGEKPQT

Query:  VIRMINFLVV
        +I+M++FLVV
Subjt:  VIRMINFLVV

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159013.3e-3057.39Show/hide
Query:  MYSLLLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGE
        +Y   +   S  +EF+E E   + HPHNDALV+ L IANAKVHRIL++GGS  D+ S TA+ AM LG + L+SSLTPL+GFGGERI P+G IELP+TF  
Subjt:  MYSLLLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGE

Query:  KPQTVIRMINFLVVD
        +P+++ RM++FLVVD
Subjt:  KPQTVIRMINFLVVD

A0A6J1DAK4 uncharacterized protein LOC1110189021.0e-2653.91Show/hide
Query:  MYSLLLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGE
        +Y   + +    +EF E+E   I HPHNDALV+ L IANAKVH IL++GGS  D++S TA+  M LG   L+SS  PLVGFGGE + P G IELPVTFG 
Subjt:  MYSLLLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGE

Query:  KPQTVIRMINFLVVD
         P+++ +M++FLVVD
Subjt:  KPQTVIRMINFLVVD

A0A6J1DKR9 uncharacterized protein LOC1110214383.1e-2858.49Show/hide
Query:  SPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGEKPQTVIRMI
        S  +EF+++    + HPHNDAL++ L IANAKVHRIL++GGS AD +S TA+ AM LG + L+SSLTPL+GFGGER+ P G IELPVTF   P+++ +M+
Subjt:  SPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGEKPQTVIRMI

Query:  NFLVVD
        +FLVVD
Subjt:  NFLVVD

A0A6J1DP33 uncharacterized protein LOC1110228861.2e-2756.36Show/hide
Query:  LLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGEKPQT
        ++ +    LEF+E+E   + HPHNDALV+ L IANAKVHRIL++GGS   ++S TA+ AM LG   L+SS  PLVGFGGER+ P G IELPV FG  P++
Subjt:  LLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGEKPQT

Query:  VIRMINFLVV
        +I+M++FLVV
Subjt:  VIRMINFLVV

A0A6J1DQY2 uncharacterized protein LOC1110223212.0e-2754.78Show/hide
Query:  MYSLLLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGE
        +Y   +      +EF+E E   + HPHNDALV+ L IAN KVHRIL++GGS AD++S TA+ AM LG   L+SS  PLVGFGGER+   G IELPVTFG 
Subjt:  MYSLLLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGE

Query:  KPQTVIRMINFLVVD
         P++V +M++FLVV+
Subjt:  KPQTVIRMINFLVVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCGCTCCTACTCAATAAAAACTCACCAAACTTAGAGTTTACAGAGGAAGAGACTGCATGGATACAACACCCACACAATGACGCATTGGTAGTAGCCCTAACAAT
CGCCAATGCCAAAGTGCATCGAATTTTAATTGAGGGAGGAAGCTTAGCCGATGTTCTCTCAACTACCGCGTTTGATGCCATGAAGCTGGGAAGCGATCGCCTGAGGTCGA
GCCTTACACCGTTGGTGGGATTTGGAGGAGAAAGAATAAGCCCAAGGGGACACATCGAACTGCCAGTGACGTTTGGGGAAAAACCGCAGACAGTTATAAGAATGATCAAC
TTTCTGGTGGTGGATGATAGCGAGCATAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACTCGCTCCTACTCAATAAAAACTCACCAAACTTAGAGTTTACAGAGGAAGAGACTGCATGGATACAACACCCACACAATGACGCATTGGTAGTAGCCCTAACAAT
CGCCAATGCCAAAGTGCATCGAATTTTAATTGAGGGAGGAAGCTTAGCCGATGTTCTCTCAACTACCGCGTTTGATGCCATGAAGCTGGGAAGCGATCGCCTGAGGTCGA
GCCTTACACCGTTGGTGGGATTTGGAGGAGAAAGAATAAGCCCAAGGGGACACATCGAACTGCCAGTGACGTTTGGGGAAAAACCGCAGACAGTTATAAGAATGATCAAC
TTTCTGGTGGTGGATGATAGCGAGCATAGCTAG
Protein sequenceShow/hide protein sequence
MYSLLLNKNSPNLEFTEEETAWIQHPHNDALVVALTIANAKVHRILIEGGSLADVLSTTAFDAMKLGSDRLRSSLTPLVGFGGERISPRGHIELPVTFGEKPQTVIRMIN
FLVVDDSEHS