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Lag0011679 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011679
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr1:30700880..30701958
RNA-Seq ExpressionLag0011679
SyntenyLag0011679
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022926214.1 uncharacterized protein LOC111433394 [Cucurbita moschata]1.9e-1656Show/hide
Query:  SAEEACVYCGEDHNYEFCPNNPASVFFVGNQ------RNNPYSNFYNPGWCNHPNFAWGGQGSNVQTQQKDTEHP
        +A E+CVYCGE+H ++ CP+NPAS+F+VGNQ      +NNP+SN YNPGW NHPNF+W GQGS  Q       +P
Subjt:  SAEEACVYCGEDHNYEFCPNNPASVFFVGNQ------RNNPYSNFYNPGWCNHPNFAWGGQGSNVQTQQKDTEHP

XP_022929949.1 uncharacterized protein LOC111436411 [Cucurbita moschata]4.6e-1553.33Show/hide
Query:  SAEEACVYCGEDHNYEFCPNNPASVFFVGNQ------RNNPYSNFYNPGWCNHPNFAWGGQGSNVQTQQKDTEHP
        +A E+CVYCGE+H ++ CP+NPAS+F+VGNQ      +NNP+SN YNPGW NHPNF+W GQ    Q       +P
Subjt:  SAEEACVYCGEDHNYEFCPNNPASVFFVGNQ------RNNPYSNFYNPGWCNHPNFAWGGQGSNVQTQQKDTEHP

XP_030487620.1 uncharacterized protein LOC115704559 [Cannabis sativa]2.7e-1560Show/hide
Query:  AEEACVYCGEDHNYEFCPNNPASVFFVGNQ----RNNPYSNFYNPGWCNHPNFAWGGQG---SNVQTQQKDTEHP
        AE +CVYCG+ H +E CP+NPASV +VGNQ     NNPYSN YNPGW +HPNF+WGGQG   S  Q Q K +  P
Subjt:  AEEACVYCGEDHNYEFCPNNPASVFFVGNQ----RNNPYSNFYNPGWCNHPNFAWGGQG---SNVQTQQKDTEHP

XP_030494811.1 uncharacterized protein LOC115710592 [Cannabis sativa]7.7e-1857.14Show/hide
Query:  EEACV-YCGEDHNYEFCPNNPASVFFVGNQ----RNNPYSNFYNPGWCNHPNFAWGGQGSNVQTQ---QKDTEHPRREGKEQVKAVTLRSG
        E +CV YCG+ H +E CP+NPASV +VGNQ     NNPYSN YNP W +HPNF+WG      + Q     DT++PRR+GKE  KAVTLRSG
Subjt:  EEACV-YCGEDHNYEFCPNNPASVFFVGNQ----RNNPYSNFYNPGWCNHPNFAWGGQGSNVQTQ---QKDTEHPRREGKEQVKAVTLRSG

XP_030509057.1 uncharacterized protein LOC115723720 [Cannabis sativa]1.9e-1641.43Show/hide
Query:  AEEACVYCGEDHNYEFCPNNPASVFFVGNQ----RNNPYSNFYNPGWCNHPNFAWGGQG---SNVQTQQK------------------------------
        AE +CVYCG+ H +E CP+NP SV +VGNQ     NNPYSN YNP W +HPNF+WGGQG   S  Q Q K                              
Subjt:  AEEACVYCGEDHNYEFCPNNPASVFFVGNQ----RNNPYSNFYNPGWCNHPNFAWGGQG---SNVQTQQK------------------------------

Query:  -------------------DTEHPRREGKEQVKAVTLRSG
                           DTE+PRR+GK+  KAVTLRSG
Subjt:  -------------------DTEHPRREGKEQVKAVTLRSG

TrEMBL top hitse value%identityAlignment
A0A6J1DSZ5 uncharacterized protein LOC1110241072.1e-1349.43Show/hide
Query:  EQKSSATASCGACGEPS-----AEEACVYCGEDHNYEFCPNNPASVFFVG---NQRNNPYSNFYNPGWCNHPNFAWGGQGSNVQTQQ
        E+ ++A AS  A   PS     AE  C YCG+ H  E CP+NP+S+++VG    Q+ NPYSN Y+PGW  HPNF+W GQGS+  T Q
Subjt:  EQKSSATASCGACGEPS-----AEEACVYCGEDHNYEFCPNNPASVFFVG---NQRNNPYSNFYNPGWCNHPNFAWGGQGSNVQTQQ

A0A6J1EEI2 uncharacterized protein LOC1114333949.1e-1756Show/hide
Query:  SAEEACVYCGEDHNYEFCPNNPASVFFVGNQ------RNNPYSNFYNPGWCNHPNFAWGGQGSNVQTQQKDTEHP
        +A E+CVYCGE+H ++ CP+NPAS+F+VGNQ      +NNP+SN YNPGW NHPNF+W GQGS  Q       +P
Subjt:  SAEEACVYCGEDHNYEFCPNNPASVFFVGNQ------RNNPYSNFYNPGWCNHPNFAWGGQGSNVQTQQKDTEHP

A0A6J1EQ90 uncharacterized protein LOC1114364112.2e-1553.33Show/hide
Query:  SAEEACVYCGEDHNYEFCPNNPASVFFVGNQ------RNNPYSNFYNPGWCNHPNFAWGGQGSNVQTQQKDTEHP
        +A E+CVYCGE+H ++ CP+NPAS+F+VGNQ      +NNP+SN YNPGW NHPNF+W GQ    Q       +P
Subjt:  SAEEACVYCGEDHNYEFCPNNPASVFFVGNQ------RNNPYSNFYNPGWCNHPNFAWGGQGSNVQTQQKDTEHP

A0A6J1H7E4 uncharacterized protein LOC1114611688.5e-1556.76Show/hide
Query:  ATASCGACGEPSAEEACVYCGEDHNYEFCPNNPASVFFV------GNQRNNPYSNFYNPGWCNHPNFAWGGQGS
        A A   A    +A E+CVYCGE+H ++ CP NPAS+ +V      GNQ+NNP SN YNPGW NHPNF+W GQGS
Subjt:  ATASCGACGEPSAEEACVYCGEDHNYEFCPNNPASVFFV------GNQRNNPYSNFYNPGWCNHPNFAWGGQGS

U5CZQ0 Uncharacterized protein3.8e-1558.67Show/hide
Query:  AEEACVYCGEDHNYEFCPNNPASVFFVGNQ----RNNPYSNFYNPGWCNHPNFAWGGQG---SNVQTQQKDTEHP
        AE +CVYCG+ H +E CP+NPASV +VGNQ     NNPYSN YNP W +HPNF+WGGQG   S  Q Q K +  P
Subjt:  AEEACVYCGEDHNYEFCPNNPASVFFVGNQ----RNNPYSNFYNPGWCNHPNFAWGGQG---SNVQTQQKDTEHP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGTTTTTCTATAGATGCTGAAGCAAAAGAAATGACAGAACAGAAATCATCAGCAACCGCCAGTTGTGGAGCCTGTGGTGAACCAAGTGCAGAAGAAGCATGTGT
CTATTGTGGTGAAGATCACAACTACGAGTTTTGCCCCAACAATCCAGCTTCTGTGTTTTTTGTAGGTAACCAGAGGAACAACCCTTATTCTAACTTTTATAATCCAGGTT
GGTGCAACCACCCAAACTTCGCATGGGGAGGACAAGGAAGCAATGTGCAAACACAGCAAAAGGATACTGAACACCCTAGAAGGGAAGGTAAGGAGCAGGTAAAGGCAGTG
ACTCTTAGGAGTGGGTGCGGAGGCAGCAATAATGATGCTGGAGCATTGGTTTGTTCCAGATGTGGAACCACCTTATGTGCCGCCCCACCTTATGTACCACCTCTACCTTT
TCCACAAAGGACAAAGGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGTTTTTCTATAGATGCTGAAGCAAAAGAAATGACAGAACAGAAATCATCAGCAACCGCCAGTTGTGGAGCCTGTGGTGAACCAAGTGCAGAAGAAGCATGTGT
CTATTGTGGTGAAGATCACAACTACGAGTTTTGCCCCAACAATCCAGCTTCTGTGTTTTTTGTAGGTAACCAGAGGAACAACCCTTATTCTAACTTTTATAATCCAGGTT
GGTGCAACCACCCAAACTTCGCATGGGGAGGACAAGGAAGCAATGTGCAAACACAGCAAAAGGATACTGAACACCCTAGAAGGGAAGGTAAGGAGCAGGTAAAGGCAGTG
ACTCTTAGGAGTGGGTGCGGAGGCAGCAATAATGATGCTGGAGCATTGGTTTGTTCCAGATGTGGAACCACCTTATGTGCCGCCCCACCTTATGTACCACCTCTACCTTT
TCCACAAAGGACAAAGGCCTAA
Protein sequenceShow/hide protein sequence
MIGFSIDAEAKEMTEQKSSATASCGACGEPSAEEACVYCGEDHNYEFCPNNPASVFFVGNQRNNPYSNFYNPGWCNHPNFAWGGQGSNVQTQQKDTEHPRREGKEQVKAV
TLRSGCGGSNNDAGALVCSRCGTTLCAAPPYVPPLPFPQRTKA