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Lag0011682 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011682
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr1:30759753..30763165
RNA-Seq ExpressionLag0011682
SyntenyLag0011682
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK07957.1 hypothetical protein E5676_scaffold265G00780 [Cucumis melo var. makuwa]8.4e-1635.92Show/hide
Query:  HLMRNLKLKYKDKLIDSIFFQCANAYNVIDFEFQMRQLE--------------------------VDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSH
        HL+ NLKL +KD L+D  FF CA AY V +FE+ MR +E                           + +V +G  Q+ V L  + CS R+WD+ +I C+H
Subjt:  HLMRNLKLKYKDKLIDSIFFQCANAYNVIDFEFQMRQLE--------------------------VDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSH

Query:  ACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASW
        A  VL   ++    Y S FY  + LS  YNG I P+G    W
Subjt:  ACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASW

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]1.7e-0823.64Show/hide
Query:  HLMRNLKLKYKDKLIDSIFFQCANAYNVIDFEFQMRQLE-------------------------------------------------------------
        HL+++LKL YKD +ID +FF+C  AY V+DFE  MR +E                                                             
Subjt:  HLMRNLKLKYKDKLIDSIFFQCANAYNVIDFEFQMRQLE-------------------------------------------------------------

Query:  --------------------------------------------VDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYL
                                                    V+ +VIDG  Q+ V L  K C+ R+WD+ +I C+HA AVL  ++++   + S ++L
Subjt:  --------------------------------------------VDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYL

Query:  SKALSSIYNGLIHPLGHGAS
        S  L S Y G + P+G+ A+
Subjt:  SKALSSIYNGLIHPLGHGAS

XP_022156698.1 uncharacterized protein LOC111023543 [Momordica charantia]5.3e-1027.37Show/hide
Query:  HLMRNLKLKYKDKLIDSIFFQCANAYNVIDFEFQMRQLE-------------------------------------------------------------
        HL++NLKL YKD LID +F  CA +Y   D E  MR ++                                                             
Subjt:  HLMRNLKLKYKDKLIDSIFFQCANAYNVIDFEFQMRQLE-------------------------------------------------------------

Query:  --VDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASW
          V+ +VI     + V+L +K C+ R+WD+ +I C+HA AV+    ++   Y S +YLS  L   YNG I P+G+   W
Subjt:  --VDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASW

XP_038880504.1 uncharacterized protein LOC120072166 [Benincasa hispida]5.9e-0935.71Show/hide
Query:  QMRQLEVDA------RVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASWIRKRPLDFG
        Q R  +VD       +VIDG + + V+L  K CS R+WD+++I C+HACAV+   ++ I  +   +Y    L S Y G ++P+G+ + W   R +D G
Subjt:  QMRQLEVDA------RVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASWIRKRPLDFG

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]5.9e-0937.08Show/hide
Query:  QMRQLEVDA------RVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASW
        Q R  +VD+      +V+DG + Y V++ +K CS   WD+ +I C+HACAVL+  ++    + S +Y S   SS Y   IHP+G+ + W
Subjt:  QMRQLEVDA------RVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASW

TrEMBL top hitse value%identityAlignment
A0A1S3CSI6 uncharacterized protein LOC1035044072.4e-0838.46Show/hide
Query:  EVDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASW
        +V+ +VI+G  Q+ V L  K C+ R+WD+ +I C+HA AVL  + ++   + S ++LS  L S Y G + P+G+ A+W
Subjt:  EVDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASW

A0A5C7HS95 SWIM-type domain-containing protein1.8e-0833.33Show/hide
Query:  LHLMRNLKLKY-KDKLIDSIFFQCANAYNVIDFEFQMRQLEVDAR-------------VIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHIS
        +HL RN+   Y K+K +   F + A  Y   + +F+ R  + +AR             V DG     V LTTK CS R +D+ Q+ C+HA A +  +  S
Subjt:  LHLMRNLKLKY-KDKLIDSIFFQCANAYNVIDFEFQMRQLEVDAR-------------VIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHIS

Query:  IKEYTSHFYLSKALSSIYNGLIHPLGHGASWI
          +Y S +Y S  L + Y+G IHP+G  + W+
Subjt:  IKEYTSHFYLSKALSSIYNGLIHPLGHGASWI

A0A5D3C7L7 Uncharacterized protein4.1e-1635.92Show/hide
Query:  HLMRNLKLKYKDKLIDSIFFQCANAYNVIDFEFQMRQLE--------------------------VDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSH
        HL+ NLKL +KD L+D  FF CA AY V +FE+ MR +E                           + +V +G  Q+ V L  + CS R+WD+ +I C+H
Subjt:  HLMRNLKLKYKDKLIDSIFFQCANAYNVIDFEFQMRQLE--------------------------VDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSH

Query:  ACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASW
        A  VL   ++    Y S FY  + LS  YNG I P+G    W
Subjt:  ACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASW

A0A5D3DJR8 MuDR family transposase8.2e-0923.64Show/hide
Query:  HLMRNLKLKYKDKLIDSIFFQCANAYNVIDFEFQMRQLE-------------------------------------------------------------
        HL+++LKL YKD +ID +FF+C  AY V+DFE  MR +E                                                             
Subjt:  HLMRNLKLKYKDKLIDSIFFQCANAYNVIDFEFQMRQLE-------------------------------------------------------------

Query:  --------------------------------------------VDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYL
                                                    V+ +VIDG  Q+ V L  K C+ R+WD+ +I C+HA AVL  ++++   + S ++L
Subjt:  --------------------------------------------VDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYL

Query:  SKALSSIYNGLIHPLGHGAS
        S  L S Y G + P+G+ A+
Subjt:  SKALSSIYNGLIHPLGHGAS

A0A6J1DRB5 uncharacterized protein LOC1110235432.6e-1027.37Show/hide
Query:  HLMRNLKLKYKDKLIDSIFFQCANAYNVIDFEFQMRQLE-------------------------------------------------------------
        HL++NLKL YKD LID +F  CA +Y   D E  MR ++                                                             
Subjt:  HLMRNLKLKYKDKLIDSIFFQCANAYNVIDFEFQMRQLE-------------------------------------------------------------

Query:  --VDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASW
          V+ +VI     + V+L +K C+ R+WD+ +I C+HA AV+    ++   Y S +YLS  L   YNG I P+G+   W
Subjt:  --VDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIHPLGHGASW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACATTTGATGAGGAACTTGAAGTTGAAATACAAAGACAAGCTTATTGATTCCATATTTTTTCAGTGTGCCAATGCTTACAATGTCATAGATTTTGAGTTTCAGAT
GCGTCAGTTGGAGGTAGATGCTCGAGTGATTGATGGGACGAGTCAATATGATGTTCACTTAACAACCAAGAGGTGTAGTTATCGGATGTGGGACATCTTGCAAATTTCGT
GTTCTCATGCATGCGCTGTATTGACAACGAAGCACATATCCATCAAGGAGTATACATCACACTTCTACCTTAGCAAGGCTCTATCTTCTATATACAATGGTTTAATTCAT
CCATTAGGGCATGGGGCTAGTTGGATCCGAAAGAGGCCCTTGGATTTTGGTCGCACATTTTTGTTGTGTCATGGGTCAACATCGTCAAAGGAGCCAAGCTCGCATCCAGT
GGAATCGTGCGCTGCAGGTGTCGGGGCGGTCGTCTACGTTATGTGTTGCGACATCCAACTGATTCAGATTATGGCTGCTGAATCGTCATCGAAGCAGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTACATTTGATGAGGAACTTGAAGTTGAAATACAAAGACAAGCTTATTGATTCCATATTTTTTCAGTGTGCCAATGCTTACAATGTCATAGATTTTGAGTTTCAGAT
GCGTCAGTTGGAGGTAGATGCTCGAGTGATTGATGGGACGAGTCAATATGATGTTCACTTAACAACCAAGAGGTGTAGTTATCGGATGTGGGACATCTTGCAAATTTCGT
GTTCTCATGCATGCGCTGTATTGACAACGAAGCACATATCCATCAAGGAGTATACATCACACTTCTACCTTAGCAAGGCTCTATCTTCTATATACAATGGTTTAATTCAT
CCATTAGGGCATGGGGCTAGTTGGATCCGAAAGAGGCCCTTGGATTTTGGTCGCACATTTTTGTTGTGTCATGGGTCAACATCGTCAAAGGAGCCAAGCTCGCATCCAGT
GGAATCGTGCGCTGCAGGTGTCGGGGCGGTCGTCTACGTTATGTGTTGCGACATCCAACTGATTCAGATTATGGCTGCTGAATCGTCATCGAAGCAGAAGTAA
Protein sequenceShow/hide protein sequence
MLHLMRNLKLKYKDKLIDSIFFQCANAYNVIDFEFQMRQLEVDARVIDGTSQYDVHLTTKRCSYRMWDILQISCSHACAVLTTKHISIKEYTSHFYLSKALSSIYNGLIH
PLGHGASWIRKRPLDFGRTFLLCHGSTSSKEPSSHPVESCAAGVGAVVYVMCCDIQLIQIMAAESSSKQK