; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011688 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011688
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr1:30855195..30855842
RNA-Seq ExpressionLag0011688
SyntenyLag0011688
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.1e-3041.21Show/hide
Query:  RVDRREGQSRGDLKGRFEKYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASD------
        R ++R+   + D   +FEKYT  ++  +QVL  I+N  LLK PER+     KR K +YC+FH DHGH T++C  L++E+E LI  GYLK++  +      
Subjt:  RVDRREGQSRGDLKGRFEKYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASD------

Query:  GE-----------------RGDSGRKRKTAACEARFERGHQGMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFS
        GE                   +SGRKRK    EAR  R    +Y ++      +I+F++ EA  + HPHNDALV+TL IAN +VHR L+DGGSS D+ S
Subjt:  GE-----------------RGDSGRKRKTAACEARFERGHQGMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFS

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]2.5e-2645.62Show/hide
Query:  KYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASDGERGDSGRKRKTAACEARFERGHQ
        K TP ++S +QVL  I++  LLK PER+K  P+KR K +Y +FHRDHGH T++C  L++E+E LI+ GYLK++  D +   +G     +       R  +
Subjt:  KYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASDGERGDSGRKRKTAACEARFERGHQ

Query:  GMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFSTT
         +     AK    ++F++ EA  + HPHNDALV+TL IANAKVHR L+DGGSST + S T
Subjt:  GMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFSTT

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]1.4e-2646.54Show/hide
Query:  YTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASDGERGDSGRKRKTAACEARFERGHQG
        YT  +I  +QVL  I++  LLK PER+K    KR K +YC+FHRDH H T++C  L++E+E LI+ GYLK+     ER     K+K    EAR  R    
Subjt:  YTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASDGERGDSGRKRKTAACEARFERGHQG

Query:  MYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFSTT
        +Y  ++     +I+F++ EA  + H HNDALV+TL IAN KVHR L+DGGSS D+ S T
Subjt:  MYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFSTT

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]7.9e-3342.79Show/hide
Query:  RVDRREGQSRGDLKGRFEKYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASD------
        R ++R+  S+ D   +FEKYTP ++  +QVL  I++  LLK PER+K    KR K +YC+FHRDHGH T++C  L++E+E LI+ GYLK++  +      
Subjt:  RVDRREGQSRGDLKGRFEKYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASD------

Query:  GE-----------------RGDSGRKRKTAACEARFERGHQGMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFST
        GE                   +SGRKRK    EAR  R    +Y  +      +I+F++ EA  + HPHNDALV+ L IAN KVHR L+DGGSS D+ S 
Subjt:  GE-----------------RGDSGRKRKTAACEARFERGHQGMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFST

Query:  T
        T
Subjt:  T

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]4.8e-3041.21Show/hide
Query:  RVDRREGQSRGDLKGRFEKYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASD------
        R ++R+  S+ D   +FEKYTP ++  +QVL  I++  LLK PER+K    KR K +YC+FHRDH H T++   L++E+E LI+ GYL+++  +      
Subjt:  RVDRREGQSRGDLKGRFEKYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASD------

Query:  GE-----------------RGDSGRKRKTAACEARFERGHQGMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFS
        GE                   +S RKRK    EAR  R    +Y  +      +I+F++ EA  + HPHNDALV+TL IAN KVHR L+DGGSS D+ S
Subjt:  GE-----------------RGDSGRKRKTAACEARFERGHQGMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFS

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.0e-3041.21Show/hide
Query:  RVDRREGQSRGDLKGRFEKYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASD------
        R ++R+   + D   +FEKYT  ++  +QVL  I+N  LLK PER+     KR K +YC+FH DHGH T++C  L++E+E LI  GYLK++  +      
Subjt:  RVDRREGQSRGDLKGRFEKYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASD------

Query:  GE-----------------RGDSGRKRKTAACEARFERGHQGMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFS
        GE                   +SGRKRK    EAR  R    +Y ++      +I+F++ EA  + HPHNDALV+TL IAN +VHR L+DGGSS D+ S
Subjt:  GE-----------------RGDSGRKRKTAACEARFERGHQGMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFS

A0A6J1DP33 uncharacterized protein LOC1110228861.2e-2645.62Show/hide
Query:  KYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASDGERGDSGRKRKTAACEARFERGHQ
        K TP ++S +QVL  I++  LLK PER+K  P+KR K +Y +FHRDHGH T++C  L++E+E LI+ GYLK++  D +   +G     +       R  +
Subjt:  KYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASDGERGDSGRKRKTAACEARFERGHQ

Query:  GMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFSTT
         +     AK    ++F++ EA  + HPHNDALV+TL IANAKVHR L+DGGSST + S T
Subjt:  GMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFSTT

A0A6J1DRG9 uncharacterized protein LOC1110235877.0e-2746.54Show/hide
Query:  YTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASDGERGDSGRKRKTAACEARFERGHQG
        YT  +I  +QVL  I++  LLK PER+K    KR K +YC+FHRDH H T++C  L++E+E LI+ GYLK+     ER     K+K    EAR  R    
Subjt:  YTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASDGERGDSGRKRKTAACEARFERGHQG

Query:  MYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFSTT
        +Y  ++     +I+F++ EA  + H HNDALV+TL IAN KVHR L+DGGSS D+ S T
Subjt:  MYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFSTT

A0A6J1DWY0 uncharacterized protein LOC1110252933.8e-3342.79Show/hide
Query:  RVDRREGQSRGDLKGRFEKYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASD------
        R ++R+  S+ D   +FEKYTP ++  +QVL  I++  LLK PER+K    KR K +YC+FHRDHGH T++C  L++E+E LI+ GYLK++  +      
Subjt:  RVDRREGQSRGDLKGRFEKYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASD------

Query:  GE-----------------RGDSGRKRKTAACEARFERGHQGMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFST
        GE                   +SGRKRK    EAR  R    +Y  +      +I+F++ EA  + HPHNDALV+ L IAN KVHR L+DGGSS D+ S 
Subjt:  GE-----------------RGDSGRKRKTAACEARFERGHQGMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFST

Query:  T
        T
Subjt:  T

A0A6J1DYL6 uncharacterized protein LOC1110257852.3e-3041.21Show/hide
Query:  RVDRREGQSRGDLKGRFEKYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASD------
        R ++R+  S+ D   +FEKYTP ++  +QVL  I++  LLK PER+K    KR K +YC+FHRDH H T++   L++E+E LI+ GYL+++  +      
Subjt:  RVDRREGQSRGDLKGRFEKYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKK-KYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASD------

Query:  GE-----------------RGDSGRKRKTAACEARFERGHQGMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFS
        GE                   +S RKRK    EAR  R    +Y  +      +I+F++ EA  + HPHNDALV+TL IAN KVHR L+DGGSS D+ S
Subjt:  GE-----------------RGDSGRKRKTAACEARFERGHQGMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHR-LIDGGSSTDVFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTATTCCTTTGGTCGAGGAAGAGTTGACCGAAGGGAAGGCCAAAGCCGAGGTGACCTAAAAGGGAGGTTTGAGAAGTACACCCCTTTGTCCATCTCTCCCGATCA
AGTCTTAGCAGCAATACAGAACACAGATCTGTTGAAACGCCCAGAAAGACTCAAGACTGACCCAAATAAAAGGAAAAAAAAATACTGCATGTTCCATCGTGATCATGGGC
ACACGACGCGAAATTGCATACAGTTGCGAGATGAGATAGAAAGCTTAATCAAGGAGGGATACCTAAAGAAGTTCGCCAGTGATGGGGAAAGAGGAGATTCCGGTCGTAAG
AGAAAGACAGCGGCTTGTGAAGCTAGGTTTGAGCGAGGACACCAGGGTATGTATTCTCTTCATCTTGCTAAAGTCGTCCCTTCCATAAAATTTACTAAGGCAGAAGCTGC
TGGTATCCATCATCCACATAATGATGCACTAGTGGTAACCTTAACCATCGCAAATGCAAAAGTCCATCGACTGATCGATGGAGGAAGTTCTACTGATGTCTTTTCCACAA
CTGATAACACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTATTCCTTTGGTCGAGGAAGAGTTGACCGAAGGGAAGGCCAAAGCCGAGGTGACCTAAAAGGGAGGTTTGAGAAGTACACCCCTTTGTCCATCTCTCCCGATCA
AGTCTTAGCAGCAATACAGAACACAGATCTGTTGAAACGCCCAGAAAGACTCAAGACTGACCCAAATAAAAGGAAAAAAAAATACTGCATGTTCCATCGTGATCATGGGC
ACACGACGCGAAATTGCATACAGTTGCGAGATGAGATAGAAAGCTTAATCAAGGAGGGATACCTAAAGAAGTTCGCCAGTGATGGGGAAAGAGGAGATTCCGGTCGTAAG
AGAAAGACAGCGGCTTGTGAAGCTAGGTTTGAGCGAGGACACCAGGGTATGTATTCTCTTCATCTTGCTAAAGTCGTCCCTTCCATAAAATTTACTAAGGCAGAAGCTGC
TGGTATCCATCATCCACATAATGATGCACTAGTGGTAACCTTAACCATCGCAAATGCAAAAGTCCATCGACTGATCGATGGAGGAAGTTCTACTGATGTCTTTTCCACAA
CTGATAACACCTAA
Protein sequenceShow/hide protein sequence
MGYSFGRGRVDRREGQSRGDLKGRFEKYTPLSISPDQVLAAIQNTDLLKRPERLKTDPNKRKKKYCMFHRDHGHTTRNCIQLRDEIESLIKEGYLKKFASDGERGDSGRK
RKTAACEARFERGHQGMYSLHLAKVVPSIKFTKAEAAGIHHPHNDALVVTLTIANAKVHRLIDGGSSTDVFSTTDNT