; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011691 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011691
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationchr1:30944003..30947727
RNA-Seq ExpressionLag0011691
SyntenyLag0011691
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150466.2 nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus]1.4e-8868.38Show/hide
Query:  MSSKTDFKIHPDFDNQQIRNYTTDNSQPWWWHG------GATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGEIATPHKNRDASIVLP
        MSS+ + + HPD DNQQI NY+T+NSQP   HG        T  MP+E +K +WAWPK  VDS P  KTSTK++ ITLS   G     P+K+RD S VLP
Subjt:  MSSKTDFKIHPDFDNQQIRNYTTDNSQPWWWHG------GATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGEIATPHKNRDASIVLP

Query:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTL-NSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ
         M N  +HASTSQSEL++LSMTA TSY YHD  YGGL+ PFGFQT+ NS+YS     RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+I RSQ
Subjt:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTL-NSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ

Query:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASM-GEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI
        +KPYLHESRHLHAMRRERGCGGRF+SK KK E+++ +  +DGEGSNISLGSESM NGS CY GSQLHLSAYI
Subjt:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASM-GEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI

XP_008460780.1 PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]4.8e-9271.75Show/hide
Query:  MSSKTDFKIHPDFDNQQIRNYTTDNSQPWWWHGG--ATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGEIATPHKNRDASIVLPLMIN
        MSS+ +    PD DNQQI NY T+NSQP   HGG   T +M +E +K +WAWPKG VDS P P+TS K+M+ITLS   G E   P+K+RD S VLPLM N
Subjt:  MSSKTDFKIHPDFDNQQIRNYTTDNSQPWWWHGG--ATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGEIATPHKNRDASIVLPLMIN

Query:  NEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTL-NSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPY
          +HASTSQ EL+TLSMT  TSY YHD  YGGL  PF FQT+ NS+YSRMAQ RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRI RSQ+KPY
Subjt:  NEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTL-NSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPY

Query:  LHESRHLHAMRRERGCGGRFVSKKKKGESTASM--GEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI
        LHESRHLHAMRRERGCGGRF+SKKKK E++ S+   +DGEGSNISLGSESM NGS+CY GSQLHLSAYI
Subjt:  LHESRHLHAMRRERGCGGRFVSKKKKGESTASM--GEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI

XP_022151660.1 nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia]8.3e-10576.26Show/hide
Query:  MSSKTDFKIHPDFDNQQIR----NYTTDNSQPWWWHGG--------ATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGE-IATPHKNR
        MSS T+++  P  DN Q R    NYTTDNSQ WWWHGG         T  M +E D+++WAWPKG V SGPGPKTS KQMQ T+SPP+GGE  ATP+K+R
Subjt:  MSSKTDFKIHPDFDNQQIR----NYTTDNSQPWWWHGG--------ATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGE-IATPHKNR

Query:  DASIVLPLMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGL-VPPFGFQTLNSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE
        DASI+LPLM NNEH ASTS SELVTL MTA TSYQYHDAC GG+ +PPFGFQTLNSEYS++A GRMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEVE
Subjt:  DASIVLPLMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGL-VPPFGFQTLNSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE

Query:  NRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI
        NRI RSQKKPYLHESRHLHAMRRERGCGGRFVSKKKK ES+ASM +D  GSNISLGSE MSNGSSCY GS LHLSAYI
Subjt:  NRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI

XP_022151661.1 nuclear transcription factor Y subunit A-7-like isoform X2 [Momordica charantia]8.3e-10576.26Show/hide
Query:  MSSKTDFKIHPDFDNQQIR----NYTTDNSQPWWWHGG--------ATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGE-IATPHKNR
        MSS T+++  P  DN Q R    NYTTDNSQ WWWHGG         T  M +E D+++WAWPKG V SGPGPKTS KQMQ T+SPP+GGE  ATP+K+R
Subjt:  MSSKTDFKIHPDFDNQQIR----NYTTDNSQPWWWHGG--------ATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGE-IATPHKNR

Query:  DASIVLPLMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGL-VPPFGFQTLNSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE
        DASI+LPLM NNEH ASTS SELVTL MTA TSYQYHDAC GG+ +PPFGFQTLNSEYS++A GRMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEVE
Subjt:  DASIVLPLMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGL-VPPFGFQTLNSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE

Query:  NRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI
        NRI RSQKKPYLHESRHLHAMRRERGCGGRFVSKKKK ES+ASM +D  GSNISLGSE MSNGSSCY GS LHLSAYI
Subjt:  NRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI

XP_031739714.1 nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus]1.4e-8868.38Show/hide
Query:  MSSKTDFKIHPDFDNQQIRNYTTDNSQPWWWHG------GATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGEIATPHKNRDASIVLP
        MSS+ + + HPD DNQQI NY+T+NSQP   HG        T  MP+E +K +WAWPK  VDS P  KTSTK++ ITLS   G     P+K+RD S VLP
Subjt:  MSSKTDFKIHPDFDNQQIRNYTTDNSQPWWWHG------GATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGEIATPHKNRDASIVLP

Query:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTL-NSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ
         M N  +HASTSQSEL++LSMTA TSY YHD  YGGL+ PFGFQT+ NS+YS     RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+I RSQ
Subjt:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTL-NSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ

Query:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASM-GEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI
        +KPYLHESRHLHAMRRERGCGGRF+SK KK E+++ +  +DGEGSNISLGSESM NGS CY GSQLHLSAYI
Subjt:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASM-GEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI

TrEMBL top hitse value%identityAlignment
A0A0A0KWA0 Nuclear transcription factor Y subunit6.9e-8968.38Show/hide
Query:  MSSKTDFKIHPDFDNQQIRNYTTDNSQPWWWHG------GATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGEIATPHKNRDASIVLP
        MSS+ + + HPD DNQQI NY+T+NSQP   HG        T  MP+E +K +WAWPK  VDS P  KTSTK++ ITLS   G     P+K+RD S VLP
Subjt:  MSSKTDFKIHPDFDNQQIRNYTTDNSQPWWWHG------GATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGEIATPHKNRDASIVLP

Query:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTL-NSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ
         M N  +HASTSQSEL++LSMTA TSY YHD  YGGL+ PFGFQT+ NS+YS     RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+I RSQ
Subjt:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTL-NSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ

Query:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASM-GEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI
        +KPYLHESRHLHAMRRERGCGGRF+SK KK E+++ +  +DGEGSNISLGSESM NGS CY GSQLHLSAYI
Subjt:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASM-GEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI

A0A1S3CEE5 Nuclear transcription factor Y subunit2.3e-9271.75Show/hide
Query:  MSSKTDFKIHPDFDNQQIRNYTTDNSQPWWWHGG--ATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGEIATPHKNRDASIVLPLMIN
        MSS+ +    PD DNQQI NY T+NSQP   HGG   T +M +E +K +WAWPKG VDS P P+TS K+M+ITLS   G E   P+K+RD S VLPLM N
Subjt:  MSSKTDFKIHPDFDNQQIRNYTTDNSQPWWWHGG--ATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGEIATPHKNRDASIVLPLMIN

Query:  NEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTL-NSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPY
          +HASTSQ EL+TLSMT  TSY YHD  YGGL  PF FQT+ NS+YSRMAQ RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRI RSQ+KPY
Subjt:  NEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTL-NSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPY

Query:  LHESRHLHAMRRERGCGGRFVSKKKKGESTASM--GEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI
        LHESRHLHAMRRERGCGGRF+SKKKK E++ S+   +DGEGSNISLGSESM NGS+CY GSQLHLSAYI
Subjt:  LHESRHLHAMRRERGCGGRFVSKKKKGESTASM--GEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI

A0A6J1DBT5 Nuclear transcription factor Y subunit4.0e-10576.26Show/hide
Query:  MSSKTDFKIHPDFDNQQIR----NYTTDNSQPWWWHGG--------ATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGE-IATPHKNR
        MSS T+++  P  DN Q R    NYTTDNSQ WWWHGG         T  M +E D+++WAWPKG V SGPGPKTS KQMQ T+SPP+GGE  ATP+K+R
Subjt:  MSSKTDFKIHPDFDNQQIR----NYTTDNSQPWWWHGG--------ATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGE-IATPHKNR

Query:  DASIVLPLMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGL-VPPFGFQTLNSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE
        DASI+LPLM NNEH ASTS SELVTL MTA TSYQYHDAC GG+ +PPFGFQTLNSEYS++A GRMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEVE
Subjt:  DASIVLPLMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGL-VPPFGFQTLNSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE

Query:  NRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI
        NRI RSQKKPYLHESRHLHAMRRERGCGGRFVSKKKK ES+ASM +D  GSNISLGSE MSNGSSCY GS LHLSAYI
Subjt:  NRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI

A0A6J1DFC4 Nuclear transcription factor Y subunit4.0e-10576.26Show/hide
Query:  MSSKTDFKIHPDFDNQQIR----NYTTDNSQPWWWHGG--------ATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGE-IATPHKNR
        MSS T+++  P  DN Q R    NYTTDNSQ WWWHGG         T  M +E D+++WAWPKG V SGPGPKTS KQMQ T+SPP+GGE  ATP+K+R
Subjt:  MSSKTDFKIHPDFDNQQIR----NYTTDNSQPWWWHGG--------ATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGE-IATPHKNR

Query:  DASIVLPLMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGL-VPPFGFQTLNSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE
        DASI+LPLM NNEH ASTS SELVTL MTA TSYQYHDAC GG+ +PPFGFQTLNSEYS++A GRMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEVE
Subjt:  DASIVLPLMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGL-VPPFGFQTLNSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVE

Query:  NRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI
        NRI RSQKKPYLHESRHLHAMRRERGCGGRFVSKKKK ES+ASM +D  GSNISLGSE MSNGSSCY GS LHLSAYI
Subjt:  NRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI

A0A6J1EKQ7 Nuclear transcription factor Y subunit2.8e-7461.13Show/hide
Query:  MSSKTDFKIHPDFDNQQIRNYTTDNSQPWWWHGGATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGEIATPHKNRDASIVLPLMINNE
        MSSKTD++ HPD        Y   N QP WW G  T     + DK +W WP G VD+GP P  STK++Q T++PP  GE     +++DASIVLPLM N  
Subjt:  MSSKTDFKIHPDFDNQQIRNYTTDNSQPWWWHGGATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGEIATPHKNRDASIVLPLMINNE

Query:  HHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTL-NSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPYLH
        +HAST +        T  TSYQY+D  YG L+PPFGFQTL NSEY+     RM LPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV N+I RSQKKPYLH
Subjt:  HHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTL-NSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPYLH

Query:  ESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI
        ESRHLHAMRRERGC GRFVSKKK  E  ASM +DG+GSN+S         S+CY GS+LHLSAYI
Subjt:  ESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-72.0e-2448.94Show/hide
Query:  TLSMTAGTSYQYHDACYGGLV--PPFGFQTLNSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPYLHESRHLHAMRR
        T SM  G  Y Y D  Y  +   PP  +  ++ +   + Q  + LP    EEPV+VNAKQYHGILRRRQSRA+ E +N++I+S +KPYLHESRHLHA+RR
Subjt:  TLSMTAGTSYQYHDACYGGLV--PPFGFQTLNSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPYLHESRHLHAMRR

Query:  ERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGS
         RGCGGRF++ KK+ E       + E SN+S G  +M+  S
Subjt:  ERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGS

Q8VY64 Nuclear transcription factor Y subunit A-41.6e-2141.24Show/hide
Query:  KNRDASIVLPLMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVP-----PFGFQTLNSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQS
        K R  S   P + +     S   + + +  M  G  Y Y D  Y  +       P  +  +  +   M Q  + L     EEPV+VNAKQYHGILRRRQS
Subjt:  KNRDASIVLPLMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVP-----PFGFQTLNSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQS

Query:  RAKAEVENRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKK-----KGESTASMGEDGEGSNISLGSESMSNGSS
        RAK E  NR I++ KKPY+HESRHLHA+RR RGCGGRF++ KK     K E  A+  E+   ++ SL SE ++  +S
Subjt:  RAKAEVENRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKK-----KGESTASMGEDGEGSNISLGSESMSNGSS

Q93ZH2 Nuclear transcription factor Y subunit A-39.2e-2251.82Show/hide
Query:  AGTSYQYHDACYGGLVPPFGF---QTLNSEYSRMAQGRMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPYLHESRHLHAMRRERG
        A  S+ Y D  YGGL+         T N +   M  GR+ LP  + E +PV+VNAKQYH I+RRRQ RAK E +N++IR+ +KPYLHESRH+HA++R RG
Subjt:  AGTSYQYHDACYGGLVPPFGF---QTLNSEYSRMAQGRMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPYLHESRHLHAMRRERG

Query:  CGGRFVSKKK
         GGRF++ KK
Subjt:  CGGRFVSKKK

Q945M9 Nuclear transcription factor Y subunit A-96.8e-2540.61Show/hide
Query:  TSTKQMQITLSPPRGGEIATPHKNRDASIVLPLMINNEHHASTS---QSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAM
        T  K+ Q+T SP   G+ +   KN+++           HH  T      +LV  ++   +S  Y D  Y G++  +G   L    Y  M   RM LP  M
Subjt:  TSTKQMQITLSPPRGGEIATPHKNRDASIVLPLMINNEHHASTS---QSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAM

Query:  AEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGG
        A+EPV+VNAKQY  ILRRRQ+RAKAE+E ++I+S +KPYLHESRH HAMRR RG GGRF  K     S     E   G      S S S+    + G
Subjt:  AEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGG

Q9LXV5 Nuclear transcription factor Y subunit A-12.1e-2649.68Show/hide
Query:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ
        L I N H     Q   +     A     Y D  YGGL+  +G Q L    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++IR  
Subjt:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ

Query:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGS
        +KPYLHESRH HAMRR R  GGRF  K     S    GED  G +   GS + S+GS
Subjt:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGS

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A94.8e-2640.61Show/hide
Query:  TSTKQMQITLSPPRGGEIATPHKNRDASIVLPLMINNEHHASTS---QSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAM
        T  K+ Q+T SP   G+ +   KN+++           HH  T      +LV  ++   +S  Y D  Y G++  +G   L    Y  M   RM LP  M
Subjt:  TSTKQMQITLSPPRGGEIATPHKNRDASIVLPLMINNEHHASTS---QSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAM

Query:  AEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGG
        A+EPV+VNAKQY  ILRRRQ+RAKAE+E ++I+S +KPYLHESRH HAMRR RG GGRF  K     S     E   G      S S S+    + G
Subjt:  AEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGSSCYGG

AT5G12840.1 nuclear factor Y, subunit A11.5e-2749.68Show/hide
Query:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ
        L I N H     Q   +     A     Y D  YGGL+  +G Q L    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++IR  
Subjt:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ

Query:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGS
        +KPYLHESRH HAMRR R  GGRF  K     S    GED  G +   GS + S+GS
Subjt:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGS

AT5G12840.2 nuclear factor Y, subunit A11.5e-2749.68Show/hide
Query:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ
        L I N H     Q   +     A     Y D  YGGL+  +G Q L    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++IR  
Subjt:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ

Query:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGS
        +KPYLHESRH HAMRR R  GGRF  K     S    GED  G +   GS + S+GS
Subjt:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGS

AT5G12840.3 nuclear factor Y, subunit A11.5e-2749.68Show/hide
Query:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ
        L I N H     Q   +     A     Y D  YGGL+  +G Q L    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++IR  
Subjt:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ

Query:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGS
        +KPYLHESRH HAMRR R  GGRF  K     S    GED  G +   GS + S+GS
Subjt:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGS

AT5G12840.4 nuclear factor Y, subunit A11.5e-2749.68Show/hide
Query:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ
        L I N H     Q   +     A     Y D  YGGL+  +G Q L    Y  M + R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E ++IR  
Subjt:  LMINNEHHASTSQSELVTLSMTAGTSYQYHDACYGGLVPPFGFQTLN-SEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQ

Query:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGS
        +KPYLHESRH HAMRR R  GGRF  K     S    GED  G +   GS + S+GS
Subjt:  KKPYLHESRHLHAMRRERGCGGRFVSKKKKGESTASMGEDGEGSNISLGSESMSNGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCCAAAACAGATTTCAAAATCCATCCAGATTTTGATAATCAGCAAATCAGAAACTACACCACCGATAATTCTCAACCTTGGTGGTGGCACGGCGGCGCCACCGT
GGACATGCCAAGGGAATTAGACAAAGCAGATTGGGCTTGGCCCAAGGGCTTCGTTGACAGTGGACCAGGGCCCAAAACAAGCACAAAGCAAATGCAAATAACTCTATCCC
CACCTCGAGGTGGAGAAATAGCAACACCACATAAGAATAGAGATGCATCCATTGTGCTACCATTGATGATCAATAATGAACACCATGCCTCTACTTCCCAATCAGAGCTT
GTTACTCTTTCAATGACGGCGGGTACGTCGTACCAGTACCACGACGCTTGCTATGGAGGACTGGTGCCTCCATTCGGATTTCAAACATTGAATTCAGAATATAGCAGAAT
GGCACAAGGTAGAATGGCTTTGCCTCTTGCTATGGCGGAAGAACCCGTTTACGTGAACGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCTCGAGCCAAGGCCG
AAGTCGAAAACAGGATAATCAGATCGCAAAAAAAGCCCTATCTCCACGAGTCGAGGCACCTACATGCCATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAA
AAGAAGAAGGGAGAATCTACAGCTTCCATGGGTGAGGATGGGGAAGGCAGCAACATCAGCTTAGGCTCTGAATCAATGTCTAATGGCAGCAGCTGCTATGGAGGTTCCCA
ACTACACTTATCTGCATATATATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCCAAAACAGATTTCAAAATCCATCCAGATTTTGATAATCAGCAAATCAGAAACTACACCACCGATAATTCTCAACCTTGGTGGTGGCACGGCGGCGCCACCGT
GGACATGCCAAGGGAATTAGACAAAGCAGATTGGGCTTGGCCCAAGGGCTTCGTTGACAGTGGACCAGGGCCCAAAACAAGCACAAAGCAAATGCAAATAACTCTATCCC
CACCTCGAGGTGGAGAAATAGCAACACCACATAAGAATAGAGATGCATCCATTGTGCTACCATTGATGATCAATAATGAACACCATGCCTCTACTTCCCAATCAGAGCTT
GTTACTCTTTCAATGACGGCGGGTACGTCGTACCAGTACCACGACGCTTGCTATGGAGGACTGGTGCCTCCATTCGGATTTCAAACATTGAATTCAGAATATAGCAGAAT
GGCACAAGGTAGAATGGCTTTGCCTCTTGCTATGGCGGAAGAACCCGTTTACGTGAACGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCTCGAGCCAAGGCCG
AAGTCGAAAACAGGATAATCAGATCGCAAAAAAAGCCCTATCTCCACGAGTCGAGGCACCTACATGCCATGAGAAGGGAAAGGGGCTGTGGAGGCCGTTTCGTGAGCAAA
AAGAAGAAGGGAGAATCTACAGCTTCCATGGGTGAGGATGGGGAAGGCAGCAACATCAGCTTAGGCTCTGAATCAATGTCTAATGGCAGCAGCTGCTATGGAGGTTCCCA
ACTACACTTATCTGCATATATATGA
Protein sequenceShow/hide protein sequence
MSSKTDFKIHPDFDNQQIRNYTTDNSQPWWWHGGATVDMPRELDKADWAWPKGFVDSGPGPKTSTKQMQITLSPPRGGEIATPHKNRDASIVLPLMINNEHHASTSQSEL
VTLSMTAGTSYQYHDACYGGLVPPFGFQTLNSEYSRMAQGRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENRIIRSQKKPYLHESRHLHAMRRERGCGGRFVSK
KKKGESTASMGEDGEGSNISLGSESMSNGSSCYGGSQLHLSAYI