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Lag0011741 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011741
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr1:31921512..31922060
RNA-Seq ExpressionLag0011741
SyntenyLag0011741
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]8.7e-4555.36Show/hide
Query:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL
        M  MFSIA P  N+VHLYVT+  VD  A NL  +P     + + +D EP+S  PP  H+ E++V  N + E RTETDDE E+ DFDGCE+ +PS TF  L
Subjt:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL

Query:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK
        DMN +D+I EHDPI+ PMV  N   Y G+IC++KE++QH+ KCFA+K HAPYEVVESTP+ W +RCKK
Subjt:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK

KAA0036768.1 uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]4.1e-4254.17Show/hide
Query:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVP--PHDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL
        M  MFSIA    N+VHLYVT+  VD  A NL  +P     + + +D EP+S  P   H+ E++V  N + E RTETDDE E+ DFDGCE+ +PS TF  L
Subjt:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVP--PHDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL

Query:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK
        DMN +D I EHDPI+ PMV  N   Y G+IC++K++LQH+ KCFA+K HAPYEVVESTP+ W +RCKK
Subjt:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK

KAA0040476.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.6e-4354.76Show/hide
Query:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL
        M  MFSI  P  N+VHLYVT+  VD  A NL  +P     + + +D EP+S  PP  H+ E++V  N + E RTETDDE E+ DFDGCE+ +PS  F  L
Subjt:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL

Query:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK
        DMN +D I EHDPI+ PMV  N   Y G+IC++KE+LQH+ KCFA+K HAPYEVVESTP+ W +RCKK
Subjt:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK

KAA0055864.1 uncharacterized protein E6C27_scaffold104G00420 [Cucumis melo var. makuwa]1.4e-4253.57Show/hide
Query:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL
        M  MFSIA P  N+VHLYVT+  VD+ A NL  +P+    + + +D +P+S  PP  H+ E++V  N + E RTET+DELE+ D DGCE+ +PS TF  L
Subjt:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL

Query:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK
        DMN +D I EHDPI+  MV+ N   Y G+IC++KE+LQH+ KCFA+K HA YEVVESTP+ W +RCKK
Subjt:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.3e-4455.36Show/hide
Query:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL
        M  MFSIA P  N+VHLYVT+  VD  A NL  +P     + + +D EP+S  PP  H+ E++V  N + E RTETDDE E+ DFDGCE+ +PS TF  L
Subjt:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL

Query:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK
        DMN +D I EHDPI+ PMV  N   Y G+IC++K++LQH+ KCFA+K HAPYEVVESTP+ W +RCKK
Subjt:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK

TrEMBL top hitse value%identityAlignment
A0A5A7SS31 DBD_Tnp_Mut domain-containing protein4.2e-4555.36Show/hide
Query:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL
        M  MFSIA P  N+VHLYVT+  VD  A NL  +P     + + +D EP+S  PP  H+ E++V  N + E RTETDDE E+ DFDGCE+ +PS TF  L
Subjt:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL

Query:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK
        DMN +D+I EHDPI+ PMV  N   Y G+IC++KE++QH+ KCFA+K HAPYEVVESTP+ W +RCKK
Subjt:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK

A0A5A7T1X8 SWIM-type domain-containing protein2.0e-4254.17Show/hide
Query:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVP--PHDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL
        M  MFSIA    N+VHLYVT+  VD  A NL  +P     + + +D EP+S  P   H+ E++V  N + E RTETDDE E+ DFDGCE+ +PS TF  L
Subjt:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVP--PHDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL

Query:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK
        DMN +D I EHDPI+ PMV  N   Y G+IC++K++LQH+ KCFA+K HAPYEVVESTP+ W +RCKK
Subjt:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.6e-4455.36Show/hide
Query:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL
        M  MFSIA P  N+VHLYVT+  VD  A NL  +P     + + +D EP+S  PP  H+ E++V  N + E RTETDDE E+ DFDGCE+ +PS TF  L
Subjt:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL

Query:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK
        DMN +D I EHDPI+ PMV  N   Y G+IC++K++LQH+ KCFA+K HAPYEVVESTP+ W +RCKK
Subjt:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK

A0A5D3DIM2 Serine/threonine-protein phosphatase 7 long form-like protein8.0e-4454.76Show/hide
Query:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL
        M  MFSI  P  N+VHLYVT+  VD  A NL  +P     + + +D EP+S  PP  H+ E++V  N + E RTETDDE E+ DFDGCE+ +PS  F  L
Subjt:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL

Query:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK
        DMN +D I EHDPI+ PMV  N   Y G+IC++KE+LQH+ KCFA+K HAPYEVVESTP+ W +RCKK
Subjt:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK

A0A5D3DKL9 Uncharacterized protein6.8e-4353.57Show/hide
Query:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL
        M  MFSIA P  N+VHLYVT+  VD+ A NL  +P+    + + +D +P+S  PP  H+ E++V  N + E RTET+DELE+ D DGCE+ +PS TF  L
Subjt:  MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPP--HDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQL

Query:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK
        DMN +D I EHDPI+  MV+ N   Y G+IC++KE+LQH+ KCFA+K HA YEVVESTP+ W +RCKK
Subjt:  DMNVIDSIAEHDPIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTAATGTTCTCAATTGCGTTTCCTACCCAAAATTTAGTGCATTTATATGTTACTATAAGGAGGGTGGACATGGATGCACAAAATTTAGGAGAAGACCCTAGCCA
ATGTGTTGACCTGAGTCAATGTCTTGATCCTGAGCCCAAATCAGTGGTGCCTCCACATGATGGTGAAGATGTAGTGGTAGATAATACTTTTAAAGAGATGAGAACAGAGA
CAGACGATGAACTTGAAAAATTTGACTTCGATGGTTGTGAACATATTATCCCATCAGAAACATTCAATCAATTGGATATGAATGTCATAGATAGTATTGCAGAACATGAT
CCCATTGTTGCTCCTATGGTTGTTCAAAATAATTTATCATATAAGGGGTTGATATGCCAAGACAAAGAAATTCTTCAGCATTTGACAAAGTGTTTTGCTGTTAAGTGTCA
TGCACCGTACGAAGTAGTTGAGTCAACCCCATCCATATGGACAGTACGATGTAAAAAGTGGGAACTGTTGGATTGGTATGGCAACCCTAGAGGGGTGAATAGGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTAATGTTCTCAATTGCGTTTCCTACCCAAAATTTAGTGCATTTATATGTTACTATAAGGAGGGTGGACATGGATGCACAAAATTTAGGAGAAGACCCTAGCCA
ATGTGTTGACCTGAGTCAATGTCTTGATCCTGAGCCCAAATCAGTGGTGCCTCCACATGATGGTGAAGATGTAGTGGTAGATAATACTTTTAAAGAGATGAGAACAGAGA
CAGACGATGAACTTGAAAAATTTGACTTCGATGGTTGTGAACATATTATCCCATCAGAAACATTCAATCAATTGGATATGAATGTCATAGATAGTATTGCAGAACATGAT
CCCATTGTTGCTCCTATGGTTGTTCAAAATAATTTATCATATAAGGGGTTGATATGCCAAGACAAAGAAATTCTTCAGCATTTGACAAAGTGTTTTGCTGTTAAGTGTCA
TGCACCGTACGAAGTAGTTGAGTCAACCCCATCCATATGGACAGTACGATGTAAAAAGTGGGAACTGTTGGATTGGTATGGCAACCCTAGAGGGGTGAATAGGGTTTAA
Protein sequenceShow/hide protein sequence
MKLMFSIAFPTQNLVHLYVTIRRVDMDAQNLGEDPSQCVDLSQCLDPEPKSVVPPHDGEDVVVDNTFKEMRTETDDELEKFDFDGCEHIIPSETFNQLDMNVIDSIAEHD
PIVAPMVVQNNLSYKGLICQDKEILQHLTKCFAVKCHAPYEVVESTPSIWTVRCKKWELLDWYGNPRGVNRV