; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011765 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011765
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:32473324..32475295
RNA-Seq ExpressionLag0011765
SyntenyLag0011765
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.2e-2737.85Show/hide
Query:  MDPNSLVQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHIS-QGLRVELLGNNVFIFRFDNEKNRRRILKQCP
        M  ++L++EW    LT  E+++AV  D   +E TG  L   L+ KL S R I+  V+  T  +AW +  +   V+++G N+F+F F+   +R RIL+  P
Subjt:  MDPNSLVQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHIS-QGLRVELLGNNVFIFRFDNEKNRRRILKQCP

Query:  WFFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRIQ
        W FD+ L+I++ PV   KP D  F  VS W+HF+DL L   N+ M  RLGN IG FED ++        + +R+R++
Subjt:  WFFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRIQ

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]9.5e-3140Show/hide
Query:  MDPNSLVQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPW
        MD  +L+ +W +  LT  E+E+A+  D   V+     L   L+GKL + R I+A+V+ +   LAW +   L VE +G N+F+F F  E +  R++K  PW
Subjt:  MDPNSLVQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPW

Query:  FFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI
        FFDK L++L+ P      S+  F+ V+FWIH +DLP+ W N+ M  RLGN IG F D D         AS+RIR+
Subjt:  FFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]9.6e-2336.26Show/hide
Query:  LVQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHI-SQGLRVELLGNNVFIFRFDNEKNRRRILKQCPWFFDK
        L++EW    LT  E E A+  D      TG RL   L+GKL   R I   VM  T   AW + +    V+ LG N+F+F F    +R +I K  PW FD+
Subjt:  LVQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHI-SQGLRVELLGNNVFIFRFDNEKNRRRILKQCPWFFDK

Query:  FLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI
         L+++  PV  + PS+  F+ +  W+ F+DLPL    ++M  RLGN +G FE+AD  +      +++R+R+
Subjt:  FLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]1.3e-1936Show/hide
Query:  NSLVQEWSRLSLTPAENEVAVSADRVVVERTGLRLG---CYLMGKLQSHRFIAAEVMHKTFALAWHISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPW
        +SL+     LSLT  E+ V     R+  E T L +G     L+GKL + R    E M  T    W  ++G++V ++G+N+F+F F +  ++RR+L   PW
Subjt:  NSLVQEWSRLSLTPAENEVAVSADRVVVERTGLRLG---CYLMGKLQSHRFIAAEVMHKTFALAWHISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPW

Query:  FFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI
         FDK LL+L      ++PSD   + V FW+H  +LPL   N+++ E +GN +G+F D D  +G      +MRIR+
Subjt:  FFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]1.7e-1935.43Show/hide
Query:  NSLVQEWSRLSLTPAENEVAVSADRVVVERTGLRLG---CYLMGKLQSHRFIAAEVMHKTFALAWHISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPW
        +SLV     LSLT  E+ V     R+  + T L +G     L+GKL + R    E M  T    W  ++G++V ++G+N+F+F F +  ++RR+L   PW
Subjt:  NSLVQEWSRLSLTPAENEVAVSADRVVVERTGLRLG---CYLMGKLQSHRFIAAEVMHKTFALAWHISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPW

Query:  FFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI
         FDK LL+L      ++PSD   + V FW+H  +LPL   N+++ + +GN +G+F D D  +G      +MRIR+
Subjt:  FFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI

TrEMBL top hitse value%identityAlignment
A0A2K3PIT6 Ribonuclease H (Fragment)7.6e-1830.77Show/hide
Query:  VQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPWFFDKFL
        + +W    LT  E E  V  D V  E    +    L+GKL +       +  +  + +W +   + ++ L  N+F+FRF ++++   +L+  PW FD+ L
Subjt:  VQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPWFFDKFL

Query:  LILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI
        +IL+      +PSD       FW   YDLPL   +  M  RLGNTIG+F +AD+++G H +   +R+++
Subjt:  LILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI

A0A2N9GWE9 Uncharacterized protein1.3e-1731.43Show/hide
Query:  NSLVQEWSRLSLTPAENE-VAVSADRVVVERTGLRLGCY-LMGKLQSHRFIAAEVMHKTFALAW-HISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPW
        + LV+EW + SLT AE   V ++AD + V R    +G + L+GKL + ++   E +  T    W  +++G+    +G N+F+F+F ++  RRR++   PW
Subjt:  NSLVQEWSRLSLTPAENE-VAVSADRVVVERTGLRLGCY-LMGKLQSHRFIAAEVMHKTFALAW-HISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPW

Query:  FFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI
         FD  LL+L+        S   FS+  FW+ FY +PL +  ++  E++G+  G+ E+ D           +R+RI
Subjt:  FFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI

A0A6J1BSZ1 uncharacterized protein LOC1110054811.1e-2737.85Show/hide
Query:  MDPNSLVQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHIS-QGLRVELLGNNVFIFRFDNEKNRRRILKQCP
        M  ++L++EW    LT  E+++AV  D   +E TG  L   L+ KL S R I+  V+  T  +AW +  +   V+++G N+F+F F+   +R RIL+  P
Subjt:  MDPNSLVQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHIS-QGLRVELLGNNVFIFRFDNEKNRRRILKQCP

Query:  WFFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRIQ
        W FD+ L+I++ PV   KP D  F  VS W+HF+DL L   N+ M  RLGN IG FED ++        + +R+R++
Subjt:  WFFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRIQ

A0A6J1DU55 uncharacterized protein LOC1110231354.6e-3140Show/hide
Query:  MDPNSLVQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPW
        MD  +L+ +W +  LT  E+E+A+  D   V+     L   L+GKL + R I+A+V+ +   LAW +   L VE +G N+F+F F  E +  R++K  PW
Subjt:  MDPNSLVQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPW

Query:  FFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI
        FFDK L++L+ P      S+  F+ V+FWIH +DLP+ W N+ M  RLGN IG F D D         AS+RIR+
Subjt:  FFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI

A0A6J1DX30 uncharacterized protein LOC1110248744.6e-2336.26Show/hide
Query:  LVQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHI-SQGLRVELLGNNVFIFRFDNEKNRRRILKQCPWFFDK
        L++EW    LT  E E A+  D      TG RL   L+GKL   R I   VM  T   AW + +    V+ LG N+F+F F    +R +I K  PW FD+
Subjt:  LVQEWSRLSLTPAENEVAVSADRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHI-SQGLRVELLGNNVFIFRFDNEKNRRRILKQCPWFFDK

Query:  FLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI
         L+++  PV  + PS+  F+ +  W+ F+DLPL    ++M  RLGN +G FE+AD  +      +++R+R+
Subjt:  FLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMVERLGNTIGEFEDADNRNGYHHMRASMRIRI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein6.0e-0724.06Show/hide
Query:  DRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPWFFDKFLLILEFPVRGLKPSDYSFSFV
        +  V E   +  G  +M + Q+ R I A +        W  S  +   ++    F F F  E++   +L++ PW F+ ++++L+      +P    F F+
Subjt:  DRVVVERTGLRLGCYLMGKLQSHRFIAAEVMHKTFALAWHISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPWFFDKFLLILEFPVRGLKPSDYSFSFV

Query:  SFWIHFYDLPLDWHNQEMVERLGNTIGEFEDAD
         FW+    +P  + N+ +VE +G  +G+  D D
Subjt:  SFWIHFYDLPLDWHNQEMVERLGNTIGEFEDAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAAGTTGGGTCGAAATTTTCGTAATCCCAAGACATGGGCTTACGTTTTTATGTTGTGACCGACCGTTTGGTAATCAGACAGGCTGGAGAGGAAGATTTTCAGC
AATCCGGCTGCTATATCAGGTGTGTCAAGGGAACGAGGGGTCATCATCTCAGGTGCTTCTATCCTTTCTCTTACTATCCAGCTCTTTATTTTCTATCAAGATTTCTGTTT
TTGTTATGGATCCCAATTCACTTGTCCAAGAATGGTCTAGACTAAGCCTCACTCCGGCGGAGAATGAGGTGGCGGTTTCGGCCGATCGTGTAGTTGTGGAGCGAACGGGT
TTGAGGTTGGGTTGCTATTTAATGGGTAAACTGCAGTCCCATCGTTTTATCGCGGCGGAAGTTATGCACAAAACTTTCGCTTTGGCGTGGCATATTTCTCAAGGTTTGAG
GGTGGAATTGCTAGGTAATAATGTTTTTATCTTCAGATTTGACAACGAGAAAAACAGGAGGAGAATCTTGAAACAATGCCCCTGGTTTTTTGATAAATTCCTTCTCATTT
TGGAATTTCCGGTTCGTGGTCTTAAACCTTCAGACTACAGCTTCTCTTTTGTGTCATTCTGGATTCACTTTTATGACCTTCCCTTGGATTGGCACAACCAAGAGATGGTC
GAACGGTTGGGAAACACTATCGGTGAATTTGAGGATGCAGACAACCGGAATGGATACCATCATATGCGAGCCAGTATGCGGATTCGTATTCAGAATGTGGTTTTCAGTTA
TGGCAACTGGCTACGGTATGACCCAAAAGGAGTTGTTTTGGTAGGTATTTCGGTGAGGGATTTGGCGGTTGATTCGAGCAGAATCTATGGCTCCGTTCAGGCTCAAGCGG
AGGCATCAAGACAAACAAATCTGGTGAATGTTGGTGGAGTATCATCTGACGGTGTGGCTTGGTATTCTTTGTCTGGCACTTCTTCTCCTACCCATAAAGGGAAAGAGAAG
ATTATGTATCAAGCGGCGCTTCCAGTCATGGAGGGTGGGAAGGCTTCCGGCAAAGATCCATGGATGGCTTCGTCTTCCCGTGGGGTGCAGAATCTGTCGGGGGCCACCTC
TGTTCCGACGAAGTTAATACAACCGGTGGTGGTTTCAAGAAACGTCTCAACTTTTATGGGAACGTTTGAATTTTTGGATCATTATCAACGAAAATTAAAGGATTTTAATC
AAGGAGGAAGGGCCCAAAACCGTTGTGAGGATTTAAGCCCAAAGACCATGGACCGACAGAATCTAGAGAGGAATTTGGGTGGGCTTCGTGACCAAGATTTATCCAGCCCC
ATTGATGATGAGTTTGAAAGTCTTGAGGGAGTGGGCCTCCGGATCGGCGTGAAGCAGAATGGGACGAAGGTGGATTCTCCTCCTCGTGCTAAAGTTTTTGGACCGGTGTC
TTCTTGGAAGAAGAGGGCTCGGGCAGGATACGTTCCTTCTGGTCTGAACCTATCAGTGTTGGAAGAGTTTAACAAGCATAAGAATGGTCCTATTTTATTTTCTCCTGAGA
ATTTAAAGCATCCTAAAATTACGCATGATGATTATACTGAGGCGGGGACTATTGAGCAGCCCCGCCAGGATCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAAAGTTGGGTCGAAATTTTCGTAATCCCAAGACATGGGCTTACGTTTTTATGTTGTGACCGACCGTTTGGTAATCAGACAGGCTGGAGAGGAAGATTTTCAGC
AATCCGGCTGCTATATCAGGTGTGTCAAGGGAACGAGGGGTCATCATCTCAGGTGCTTCTATCCTTTCTCTTACTATCCAGCTCTTTATTTTCTATCAAGATTTCTGTTT
TTGTTATGGATCCCAATTCACTTGTCCAAGAATGGTCTAGACTAAGCCTCACTCCGGCGGAGAATGAGGTGGCGGTTTCGGCCGATCGTGTAGTTGTGGAGCGAACGGGT
TTGAGGTTGGGTTGCTATTTAATGGGTAAACTGCAGTCCCATCGTTTTATCGCGGCGGAAGTTATGCACAAAACTTTCGCTTTGGCGTGGCATATTTCTCAAGGTTTGAG
GGTGGAATTGCTAGGTAATAATGTTTTTATCTTCAGATTTGACAACGAGAAAAACAGGAGGAGAATCTTGAAACAATGCCCCTGGTTTTTTGATAAATTCCTTCTCATTT
TGGAATTTCCGGTTCGTGGTCTTAAACCTTCAGACTACAGCTTCTCTTTTGTGTCATTCTGGATTCACTTTTATGACCTTCCCTTGGATTGGCACAACCAAGAGATGGTC
GAACGGTTGGGAAACACTATCGGTGAATTTGAGGATGCAGACAACCGGAATGGATACCATCATATGCGAGCCAGTATGCGGATTCGTATTCAGAATGTGGTTTTCAGTTA
TGGCAACTGGCTACGGTATGACCCAAAAGGAGTTGTTTTGGTAGGTATTTCGGTGAGGGATTTGGCGGTTGATTCGAGCAGAATCTATGGCTCCGTTCAGGCTCAAGCGG
AGGCATCAAGACAAACAAATCTGGTGAATGTTGGTGGAGTATCATCTGACGGTGTGGCTTGGTATTCTTTGTCTGGCACTTCTTCTCCTACCCATAAAGGGAAAGAGAAG
ATTATGTATCAAGCGGCGCTTCCAGTCATGGAGGGTGGGAAGGCTTCCGGCAAAGATCCATGGATGGCTTCGTCTTCCCGTGGGGTGCAGAATCTGTCGGGGGCCACCTC
TGTTCCGACGAAGTTAATACAACCGGTGGTGGTTTCAAGAAACGTCTCAACTTTTATGGGAACGTTTGAATTTTTGGATCATTATCAACGAAAATTAAAGGATTTTAATC
AAGGAGGAAGGGCCCAAAACCGTTGTGAGGATTTAAGCCCAAAGACCATGGACCGACAGAATCTAGAGAGGAATTTGGGTGGGCTTCGTGACCAAGATTTATCCAGCCCC
ATTGATGATGAGTTTGAAAGTCTTGAGGGAGTGGGCCTCCGGATCGGCGTGAAGCAGAATGGGACGAAGGTGGATTCTCCTCCTCGTGCTAAAGTTTTTGGACCGGTGTC
TTCTTGGAAGAAGAGGGCTCGGGCAGGATACGTTCCTTCTGGTCTGAACCTATCAGTGTTGGAAGAGTTTAACAAGCATAAGAATGGTCCTATTTTATTTTCTCCTGAGA
ATTTAAAGCATCCTAAAATTACGCATGATGATTATACTGAGGCGGGGACTATTGAGCAGCCCCGCCAGGATCCATGA
Protein sequenceShow/hide protein sequence
MEQSWVEIFVIPRHGLTFLCCDRPFGNQTGWRGRFSAIRLLYQVCQGNEGSSSQVLLSFLLLSSSLFSIKISVFVMDPNSLVQEWSRLSLTPAENEVAVSADRVVVERTG
LRLGCYLMGKLQSHRFIAAEVMHKTFALAWHISQGLRVELLGNNVFIFRFDNEKNRRRILKQCPWFFDKFLLILEFPVRGLKPSDYSFSFVSFWIHFYDLPLDWHNQEMV
ERLGNTIGEFEDADNRNGYHHMRASMRIRIQNVVFSYGNWLRYDPKGVVLVGISVRDLAVDSSRIYGSVQAQAEASRQTNLVNVGGVSSDGVAWYSLSGTSSPTHKGKEK
IMYQAALPVMEGGKASGKDPWMASSSRGVQNLSGATSVPTKLIQPVVVSRNVSTFMGTFEFLDHYQRKLKDFNQGGRAQNRCEDLSPKTMDRQNLERNLGGLRDQDLSSP
IDDEFESLEGVGLRIGVKQNGTKVDSPPRAKVFGPVSSWKKRARAGYVPSGLNLSVLEEFNKHKNGPILFSPENLKHPKITHDDYTEAGTIEQPRQDP