; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011769 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011769
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr1:32529762..32532461
RNA-Seq ExpressionLag0011769
SyntenyLag0011769
Gene Ontology termsGO:0044238 - primary metabolic process (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
GO:0005622 - intracellular (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69274.1 TatD related DNase [Prunus dulcis]6.3e-14047.6Show/hide
Query:  YGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFR
        +G  G++W PIS T+A WLERPF  EE+ KAV   G  K+PGPDGF+  F ++ W  +K DL  V Q+FF++GI+N  TNET+ICLIPKK  + KV+DFR
Subjt:  YGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFR

Query:  PISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKG
        PISLVT LYKVISKVLA R+R VL  TI  +Q AF++ RQI+DA+++A+E V++ R + RKG V K+DFEKAYD V+W+F+D ++  KGFG++WR W+ G
Subjt:  PISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKG

Query:  CCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEK
        C  S+NFSI+ING+PRGK  ASRG+RQGDPLSPFLFT+V+D LSR I        + G   G ++VEVSH+QFAD+T+ F D   ++  N    L  +  
Subjt:  CCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEK

Query:  ASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFR
         SG+ IN  KS I+GIN     +  M                              +PVL+ +  +L R K   +SKGGR TLI+AVL+SIP Y+ S+F+
Subjt:  ASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFR

Query:  ILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRWQSSS--
        + +GV   +E++ R FLW+G +  +  HL+RW  VT     GGLGI +LR +N  L  KWLW F  E ++LW RII SKYG D   N    K+    S  
Subjt:  ILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRWQSSS--

Query:  -PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKD
         PWR+I+     +    R+ VG G+K+ FWED W+ E  LKD
Subjt:  -PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKD

BBN69746.1 VIRB2-interacting protein 2 [Prunus dulcis]5.7e-13346.14Show/hide
Query:  KGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFRPIS
        +G++W  IS+ +A+WL+RPF  EE+ +AV   G  K+PGPDGF+    ++ W+ +KEDL  V  +FF  GIIN  TNET+ICLIPKK+ + KVSDFRPIS
Subjt:  KGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFRPIS

Query:  LVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCS
        LVT LYK++SKVLA R+R VL  TI + Q AF++GRQI+DA +IA+E V++ R   + G V K+D EKAYD V+W F+D +L  KGFG RWR W++GC  
Subjt:  LVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCS

Query:  SSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASG
        ++NFS++INGRPRGK  ASRG+RQGDPLSPFLFT+V D LSR +          G   G   VE+SH+QFAD+T+ F +   ++  N    L  +   SG
Subjt:  SSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASG

Query:  LSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILV
        ++IN  K S++GIN+++  V  M                              DPV+E + N+L + K   +SKGGR T+I+AVL SIP+Y+ S+FRI +
Subjt:  LSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILV

Query:  GVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGAD---FIRNPLSYKRWQSSSPW
        GVA  IEK+ R FLW+G DG + +H + W+ V      GGLG+ +LR ++  L  KWLW F  E  ALW ++I S YG D   +   P +  R     PW
Subjt:  GVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGAD---FIRNPLSYKRWQSSSPW

Query:  RDIASLAGFYKHNRRYKVGRGDKVLFWEDNW
        RDI+S    +     + VG G +V FWED+W
Subjt:  RDIASLAGFYKHNRRYKVGRGDKVLFWEDNW

RVW53010.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]2.6e-13345.39Show/hide
Query:  KGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFRPIS
        +G+DW PI    A  LE PF  EEI+KA+  +   K PGPDGFT    ++ W+ IKEDL  VF EF  +GIIN+ TN ++I L+PKK ++ ++SDFRPIS
Subjt:  KGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFRPIS

Query:  LVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCS
        L+T LYK+I+KVLA R+R VL  TI ++Q AF++GRQI+DA++IA+E VD+ R    +G V K+DFEKAYD + W+FLD +LE KGF LRWRKW++GC S
Subjt:  LVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCS

Query:  SSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASG
        S ++++L+NG  +G + ASRG+RQGDPLSPFLFTIVAD LSR +     +  ++GFRVG+    VSH+QFAD+T+ F     + +   KS L  +   SG
Subjt:  SSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASG

Query:  LSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILV
        L +N+ KS+I GIN+E+  ++R+                              DPV+E I  +L   +   +S GGR TLI++ L  +P YF S+FRI  
Subjt:  LSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILV

Query:  GVAKDIEKIFRRFLWKG-GDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADF----IRNPLSYKRWQSSS
         VA  IE++ R FLW G G+G R  HL+ WD V  P S GGLG   + ++N  LL KWLW + +E  ALW ++ILS YG+      + N +   RW    
Subjt:  GVAKDIEKIFRRFLWKG-GDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADF----IRNPLSYKRWQSSS

Query:  PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKDQ
        PW+ IA +   +    R+ VG GD++ FW+D W  ++PL  Q
Subjt:  PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKDQ

RVW65579.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.1e-13345.57Show/hide
Query:  KGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFRPIS
        +G+DW PI    A  LE PF  EEI+KA+  +   K PGPDGFT    ++ W+ IKEDL  VF EF  +GIIN+ TN ++I L+PKK ++ ++SDFRPIS
Subjt:  KGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFRPIS

Query:  LVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCS
        L+T LYK+I+KVLA R+R VL  TI ++Q AF++GRQI+DA++IA+E VD+ R    +G V K+DFEKAYD V W+FLD +LE KGF LRWRKW++GC S
Subjt:  LVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCS

Query:  SSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASG
        S ++++L+NG  +G + ASRG+RQGDPLSPFLFTIVAD LSR +     +  ++GFRVG+    VSH+QFAD+T+ F     + +   KS L  +   SG
Subjt:  SSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASG

Query:  LSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILV
        L +N+ KS+I GIN+E+  ++R+                              DPV+E I  +L   +   +S GGR TLI++ L  +P YF S+FRI  
Subjt:  LSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILV

Query:  GVAKDIEKIFRRFLWKG-GDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADF----IRNPLSYKRWQSSS
         VA  IE++ R FLW G G+G R  HL+ WD V  P S GGLG   + ++N  LL KWLW + +E  ALW ++ILS YG+      + N +   RW    
Subjt:  GVAKDIEKIFRRFLWKG-GDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADF----IRNPLSYKRWQSSS

Query:  PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKDQ
        PW+ IA +   +    R+ VG GD++ FW+D W  ++PL  Q
Subjt:  PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKDQ

XP_009335445.1 PREDICTED: uncharacterized protein LOC103928158 [Pyrus x bretschneideri]1.8e-13443.75Show/hide
Query:  WSSAAIGSDSEGDESSGCGGGGDSMKVEETRKFVCYGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNV
        W    I   S GD      G      +  + +  C+G +G++W  IS ++A W+ERPF   E+ +AV   G  K+PGPDG++ +  ++ W  +K D+  V
Subjt:  WSSAAIGSDSEGDESSGCGGGGDSMKVEETRKFVCYGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNV

Query:  FQEFFENGIINRRTNETYICLIPKKEVAAKVSDFRPISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVI
         +EFFE GIIN  TNET+ICLIPKK  + KV+D+RPISLVT LYK+++K L  R+R V+  TI   Q  F++GRQI+DA++IA+E V++ R +K +G + 
Subjt:  FQEFFENGIINRRTNETYICLIPKKEVAAKVSDFRPISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVI

Query:  KVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEE
        K+DFEKAYD V+W FLD IL+ KGFG RWRKWV+GC +S+NFSILINGRP+GK  ASR +RQGDPLSPFLFT+V D LSR +        IKG  +G+E 
Subjt:  KVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEE

Query:  VEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRN
        VE+SH+QFAD+T+ F         N    L+ +   SGL IN  K S+ GIN +  ++  M                              DPV+E +  
Subjt:  VEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRN

Query:  KLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFE
        +L   K   +SKGGR TLI+ VL S+P+Y+ S+F+I  GV   +EK+ + FLW+G +  + +HL++W+ V      GGL + NLR +   LL KWLW F 
Subjt:  KLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFE

Query:  KERDALWRRIILSKYG-ADFIRNPLSYKRWQSSSPWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKDQ
        KE ++LW ++I SKYG  D   N     R  S SPW+DI+     +    +++VG G++V FWED W+   PLK+Q
Subjt:  KERDALWRRIILSKYG-ADFIRNPLSYKRWQSSSPWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKDQ

TrEMBL top hitse value%identityAlignment
A0A5H2XQW2 TatD related DNase3.0e-14047.6Show/hide
Query:  YGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFR
        +G  G++W PIS T+A WLERPF  EE+ KAV   G  K+PGPDGF+  F ++ W  +K DL  V Q+FF++GI+N  TNET+ICLIPKK  + KV+DFR
Subjt:  YGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFR

Query:  PISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKG
        PISLVT LYKVISKVLA R+R VL  TI  +Q AF++ RQI+DA+++A+E V++ R + RKG V K+DFEKAYD V+W+F+D ++  KGFG++WR W+ G
Subjt:  PISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKG

Query:  CCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEK
        C  S+NFSI+ING+PRGK  ASRG+RQGDPLSPFLFT+V+D LSR I        + G   G ++VEVSH+QFAD+T+ F D   ++  N    L  +  
Subjt:  CCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEK

Query:  ASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFR
         SG+ IN  KS I+GIN     +  M                              +PVL+ +  +L R K   +SKGGR TLI+AVL+SIP Y+ S+F+
Subjt:  ASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFR

Query:  ILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRWQSSS--
        + +GV   +E++ R FLW+G +  +  HL+RW  VT     GGLGI +LR +N  L  KWLW F  E ++LW RII SKYG D   N    K+    S  
Subjt:  ILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRWQSSS--

Query:  -PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKD
         PWR+I+     +    R+ VG G+K+ FWED W+ E  LKD
Subjt:  -PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKD

M5VS59 Reverse transcriptase domain-containing protein (Fragment)1.4e-14047.26Show/hide
Query:  TRKFVCYGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAA
        + K V +G +G++W PIS  +A WLERPF  EE+ KAV   G  K+PGPDGF+  F ++ W  +K DL  V Q+FF++GI+N  TNET+ICLIPKK  + 
Subjt:  TRKFVCYGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAA

Query:  KVSDFRPISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRW
        KV+D RPISLVT LYKVISKVLA R+R VL  TI  SQ AF++ RQI+DA+++A+E V++ R +KRKG V K+DFEKAYD V+W F+D +L  KGFG++W
Subjt:  KVSDFRPISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRW

Query:  RKWVKGCCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSF
        R W+ GC  S NFSI+ING+PRGK  ASRG+RQGDPLSPFLFT+V+D LSR I        + G   G ++VEVSH+QFAD+T+   D   ++  N    
Subjt:  RKWVKGCCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSF

Query:  LSFYEKASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVY
        L  +   SG+ IN  KS I+GIN     +  M                              +PV++ +  +L + K   +SKGGR TLI+AVL+SIP Y
Subjt:  LSFYEKASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVY

Query:  FFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRW
        + S+F++ +GVA  +E++ R FLW+G +  +  HL+RW+ VT     GGLGI +LR +N  L  KWLW F  E ++LW RII SKYG D   N    K+ 
Subjt:  FFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRW

Query:  QSSS---PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKD
           S   PWR+I+     +    R+ VG G+K+ FWED W+ E  LKD
Subjt:  QSSS---PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKD

M5WKV4 Reverse transcriptase domain-containing protein (Fragment)4.7e-14147.26Show/hide
Query:  TRKFVCYGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAA
        + K V +G +G++W PIS  +A WLERPF  EE+ KAV   G  K+PGPDGF+  F ++ W  +K DL  V Q+FF++GI+N  TNET+ICLIPKK  + 
Subjt:  TRKFVCYGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAA

Query:  KVSDFRPISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRW
        KV+D+RPISLVT LYKVISKVLA R+R VL  TI  SQ AF++ RQI+DA+++A+E V++ R +KRKG V K+DFEKAYD V+W F+D +L  KGFG +W
Subjt:  KVSDFRPISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRW

Query:  RKWVKGCCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSF
        R W+ GC  S NFSI+ING+PRGK  ASRG+RQGDPLSPFLFT+V+D LSR I        + G   G ++VEVSH+QFAD+T+   D   ++  N    
Subjt:  RKWVKGCCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSF

Query:  LSFYEKASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVY
        L  + + SG+ IN  KS I+GIN     +  M                              +PV++ +  +L + K   +SKGGR TLI+AVL+SIP Y
Subjt:  LSFYEKASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVY

Query:  FFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRW
        + S+F++ +GVA  +E++ R FLW+G +  +  HL+RW+ VT     GGLGI +LR +N  L  KWLW F  E ++LW RII SKYG D   N    K+ 
Subjt:  FFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRW

Query:  QSSS---PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKD
           S   PWR+I+     +    R+ VG G+K+ FWED W+ E  LKD
Subjt:  QSSS---PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKD

M5X4S0 Reverse transcriptase domain-containing protein (Fragment)1.2e-14147.45Show/hide
Query:  TRKFVCYGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAA
        + K V +G +G++W PIS  +A WLERPF  EE+ KAV   G  K+PGPDGF+  F ++ W  +K DL  V Q+FF++GI+N  TNET+ICLIPKK  + 
Subjt:  TRKFVCYGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAA

Query:  KVSDFRPISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRW
        KV+D+RPISLVT LYKVISKVLA R+R VL  TI  SQ AF++ RQI+DA+++A+E V++ R +KRKG V K+DFEKAYD V+W F+D ++  KGFG++W
Subjt:  KVSDFRPISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRW

Query:  RKWVKGCCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSF
        R W+ GC  S NFSI+ING+PRGK  ASRG+RQGDPLSPFLFT+V+D LSR I        + G   G ++VEVSH+QFAD+T+   D   ++  N    
Subjt:  RKWVKGCCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSF

Query:  LSFYEKASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVY
        L  +   SG+ IN  KS I+GIN     +  M                              +PV+E +  +L + K   +SKGGR TLI+AVL+SIP Y
Subjt:  LSFYEKASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVY

Query:  FFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRW
        + S+F++ +GVA  +E++ R FLW+G +  +  HL+RW+ VT     GGLGI +LR +N  L  KWLW F  E ++LW RII SKYG D   N    KR 
Subjt:  FFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRW

Query:  QSSS---PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKD
           S   PWR+I+     +    R+ VG G+K+ FWED W+ E  LKD
Subjt:  QSSS---PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKD

M5XHS0 Reverse transcriptase domain-containing protein (Fragment)1.4e-14047.08Show/hide
Query:  TRKFVCYGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAA
        + K V +G +G++W PIS  +A WLERPF  EE+ KAV   G  K+PGPDGF+  F ++ W  +K DL  V Q+FF++GI+N  TNET+ICLIPKK  + 
Subjt:  TRKFVCYGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAA

Query:  KVSDFRPISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRW
        KV+D+RPISLVT LYKVISKVL  R+R VL  TI  SQ AF++ RQI+DA+++A+E V++ R +KRKG V K+DFEKAYD V+W F+D +L  KGFG +W
Subjt:  KVSDFRPISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRW

Query:  RKWVKGCCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSF
        R W+ GC  S NFSI+ING+PRGK  ASRG+RQGDPLSPFLFT+V+D LSR I        + G   G ++VEVSH+QFAD+T+   D   ++  N    
Subjt:  RKWVKGCCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSF

Query:  LSFYEKASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVY
        L  + + SG+ IN  KS I+GIN     +  M                              +PV++ +  +L + K   +SKGGR TLI+AVL+SIP Y
Subjt:  LSFYEKASGLSINMQKSSIIGINVEEREVARM------------------------------DPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVY

Query:  FFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRW
        + S+F++ +GVA  +E++ R FLW+G +  +  HL+RW+ VT     GGLGI +LR +N  L  KWLW F  E ++LW RII SKYG D   N    K+ 
Subjt:  FFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRW

Query:  QSSS---PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKD
           S   PWR+I+     +    R+ VG G+K+ FWED W+ E  LKD
Subjt:  QSSS---PWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPLKD

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein2.0e-4027.16Show/hide
Query:  ISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKK-EVAAKVSDFRPISLVTLLY
        ++  + + L RP    EI   +  L T+K+PGPDGFT EF +     +   L  +FQ   + GI+     E  I LIPK      K  +FRPISL+ +  
Subjt:  ISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKK-EVAAKVSDFRPISLVTLLY

Query:  KVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDY-RARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCSSSNFS
        K+++K+LA RI+  +   I + Q+ FI G Q    I  +   +    RA+ +   +I +D EKA+DK+   F+   L   G    + K ++        +
Subjt:  KVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDY-RARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCSSSNFS

Query:  ILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASGLSINM
        I++NG+         G RQG PLSP LF IV + L+R IR    +  IKG ++GKEEV++S   FAD+ +++ +      +N    +S + K SG  IN+
Subjt:  ILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASGLSINM

Query:  QKS----------------------------SIIGI----NVEEREVARMDPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILVGVA
        QKS                              +GI    +V++       P+L+ I+    + K  P S  GR  ++K  +    +Y F+   I + + 
Subjt:  QKS----------------------------SIIGI----NVEEREVARMDPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILVGVA

Query:  --KDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDA-LWRRIILSKYGADFIRNPLSYKRWQSSSPW
           ++EK   +F+W      +    I    ++     GG+ + + ++     + K  W + + RD   W R   S+     I N L + + + +  W
Subjt:  --KDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDA-LWRRIILSKYGADFIRNPLSYKRWQSSSPW

P08548 LINE-1 reverse transcriptase homolog6.5e-3927.12Show/hide
Query:  ISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKK-EVAAKVSDFRPISLVTLLY
        +S  + + L RP    EI   +  L  +K+PGPDGFT EF +     +   L N+FQ   + GI+     E  I LIPK  +   +  ++RPISL+ +  
Subjt:  ISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKK-EVAAKVSDFRPISLVTLLY

Query:  KVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKG-FVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCSSSNFS
        K+++K+L  RI+  +   I + Q+ FI G Q    I  +   +      K K   ++ +D EKA+D +   F+   L+  G    + K ++   S    +
Subjt:  KVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKG-FVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCSSSNFS

Query:  ILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASGLSINM
        I++NG          G RQG PLSP LF IV + L+  IR    +  IKG  +G EE+++S   FAD+ +++ +            +  Y   SG  IN 
Subjt:  ILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASGLSINM

Query:  QKS-SIIGINVEEREVARMDPV---------------------------LEAIRNKLA----RRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILVGVA
         KS + I  N  + E    D +                            E +R ++A    + K  P S  GR  ++K  +    +Y F+   I   ++
Subjt:  QKS-SIIGINVEEREVARMDPV---------------------------LEAIRNKLA----RRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILVGVA

Query:  --KDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDA-LWRRI
          KD+EKI   F+W      +    I    ++     GG+ + +LR+   ++++K  W + K R+  +W RI
Subjt:  --KDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDA-LWRRI

P0C2F6 Putative ribonuclease H protein At1g657502.7e-2131.89Show/hide
Query:  VLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLL
        +LE + ++++  +   +S  GR TL KAVL+S+PV+  S   +   +   ++++ R FLW      +  HL++W  V +P   GGLG+   +  N  L+ 
Subjt:  VLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLL

Query:  KWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRW-----QSSSPWRDIA-SLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPL
        K  W   +E+++LW  ++  KY    IR+     RW       SS WR IA  L     H   +  G G ++ FW D W+S KPL
Subjt:  KWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRW-----QSSSPWRDIA-SLAGFYKHNRRYKVGRGDKVLFWEDNWISEKPL

P11369 LINE-1 retrotransposable element ORF2 protein2.5e-3827.73Show/hide
Query:  ISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFE----NGIINRRTNETYICLIPK-KEVAAKVSDFRPISLV
        ++  Q   L  P   +EI   +  L T+K+PGPDGF+ EF    + T KEDL  +  + F      G +     E  I LIPK ++   K+ +FRPISL+
Subjt:  ISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFE----NGIINRRTNETYICLIPK-KEVAAKVSDFRPISLV

Query:  TLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKG-FVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCSS
         +  K+++K+LA RI+  +   I   Q+ FI G Q    I  +   +      K K   +I +D EKA+DK+   F+  +LE  G    +   +K   S 
Subjt:  TLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKG-FVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCSS

Query:  SNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASGL
           +I +NG     I    G RQG PLSP+LF IV + L+R IR    +  IKG ++GKEEV++S +  AD+ +++        +   + ++ + +  G 
Subjt:  SNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASGL

Query:  SINMQKS---------------------SIIGINVEEREVARMDPVLE-----------AIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRIL
         IN  KS                     SI+  N++   V     V +            I+  L R K  P S  GR  ++K  +    +Y F+   I 
Subjt:  SINMQKS---------------------SIIGINVEEREVARMDPVLE-----------AIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRIL

Query:  VGVA--KDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDA-LWRRI
        +      ++E    +F+W          L++ D  T+    GG+ + +L++    +++K  W + ++R    W RI
Subjt:  VGVA--KDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDA-LWRRI

P14381 Transposon TX1 uncharacterized 149 kDa protein2.3e-2825.33Show/hide
Query:  ISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFRPISLVTLLYK
        +S  + + LE P   +E+ +A+ ++   K+PG DG T EF +  W+T+  D   V  E F+ G +        + L+PKK     + ++RP+SL++  YK
Subjt:  ISMTQAQWLERPFGREEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFRPISLVTLLYK

Query:  VISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCSSSNFSIL
        +++K ++ R++ VL   I   Q   + GR I D + +  + +   R        + +D EKA+D+VD ++L   L+A  FG ++  ++K   +S+   + 
Subjt:  VISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCSSSNFSIL

Query:  INGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASGLSINMQK
        IN      ++  RG+RQG PLS  L+++  +     +R       + G  + + ++ V    +AD+ +L        ++  +     Y  AS   IN  K
Subjt:  INGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASGLSINMQK

Query:  SS---------------------------IIGI--NVEEREVAR-MDPVLEAIRNKLARRKGFP--ISKGGRTTLIKAVLASIPVYFFSIFRILVGVAKD
        SS                            +G+  + EE  V++    + E +  +L + KGF   +S  GR  +I  ++AS  +++  I   L    + 
Subjt:  SS---------------------------IIGI--NVEEREVAR-MDPVLEAIRNKLARRKGFP--ISKGGRTTLIKAVLASIPVYFFSIFRILVGVAKD

Query:  IEKIFRR---FLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLK
        I KI RR   FLW       G H +     + P+  GG G+  +R +  T  L+
Subjt:  IEKIFRR---FLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLK

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein8.2e-1342.05Show/hide
Query:  EEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFRPISLVTLLYKVIS
        +EI  AV  +   K PGPD FT EF   SW  +K+      +EFF  G + +R N T I LIPK     ++S FRP+S  T++YK+I+
Subjt:  EEIWKAVTILGTQKNPGPDGFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFRPISLVTLLYKVIS

AT4G20520.1 RNA binding;RNA-directed DNA polymerases7.9e-0830.88Show/hide
Query:  LAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKR-KGF-VIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCSSSNFSILING
        + ER++ ++   I  +Q +FI GR   D I+   EAV   R +K  KG+ ++K+D EKAYD++ W++L+  L + GF   W   +    + S F      
Subjt:  LAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDDYRARKR-KGF-VIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCSSSNFSILING

Query:  RPRGKISASR---------GIRQGDPLSPFLFTIVA
           G+  AS+         G R  D  +PF    VA
Subjt:  RPRGKISASR---------GIRQGDPLSPFLFTIVA

AT4G29090.1 Ribonuclease H-like superfamily protein1.1e-1224.83Show/hide
Query:  SIPVYFFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKY--GADFIRN
        ++P Y  + F +   V K I  +   F W+     +G H   WD+++   + GG+G  ++   N  LL K +W      ++L  ++  S+Y   +D +  
Subjt:  SIPVYFFSIFRILVGVAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKY--GADFIRN

Query:  PLSYKRWQSSSPWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKP
        PL  +    S  W+ I +     +   R  VG G+ ++ W   W+  KP
Subjt:  PLSYKRWQSSSPWRDIASLAGFYKHNRRYKVGRGDKVLFWEDNWISEKP

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)4.1e-1244.12Show/hide
Query:  LINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADET
        +ING P+G ++ SRG+RQGDPLSP+LF +  + LS   R    +G + G RV      ++H+ FAD+T
Subjt:  LINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKEEVEVSHIQFADET


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCACAAGCTCCAATGTGTATATAAAATTCTGCACTTCTTTATCTATCTTTTCTCTTATTGGAAACCCGGTGGCAGGCTTCAGTTGCAGTGGTCTTCAGCGGCGAT
TGGCAGTGATTCTGAAGGAGATGAAAGTAGTGGTTGTGGAGGAGGTGGAGATAGCATGAAGGTGGAGGAAACGAGGAAGTTCGTGTGCTATGGAACAAAAGGGGTTGACT
GGCAGCCCATTTCGATGACCCAAGCTCAGTGGTTAGAAAGGCCTTTTGGGAGGGAGGAAATCTGGAAAGCAGTGACGATTCTTGGAACTCAAAAAAACCCCGGTCCAGAT
GGCTTTACAGGAGAGTTCATAAAAAATTCTTGGAACACCATTAAAGAAGACTTGTTTAATGTGTTCCAGGAATTTTTTGAGAATGGCATCATTAACCGAAGAACTAATGA
AACTTACATCTGCTTGATCCCGAAGAAGGAAGTGGCTGCAAAGGTTAGTGATTTTCGCCCCATCAGCCTAGTTACTTTGCTCTATAAAGTCATCTCTAAAGTACTAGCGG
AAAGAATTAGAGTGGTTCTCCCTTTCACAATAGACAACTCCCAGATGGCCTTTATAGAAGGTAGACAGATTATGGATGCCATTATGATAGCTTCTGAGGCCGTGGATGAT
TACCGTGCTAGAAAAAGAAAAGGTTTTGTTATCAAAGTTGACTTTGAGAAGGCCTATGATAAAGTGGATTGGGAATTCCTAGACATCATTCTTGAGGCTAAAGGATTCGG
GCTTAGGTGGAGGAAGTGGGTTAAAGGTTGTTGTTCGAGTTCCAACTTTTCTATTTTGATAAACGGTAGGCCAAGAGGTAAGATCTCAGCATCTAGAGGCATTAGACAAG
GGGATCCTTTGTCTCCCTTTCTCTTTACTATAGTAGCGGATTCTCTGAGCCGTTTTATCCGAGTGGGCAGCAGTAAAGGATTCATAAAAGGTTTTAGAGTGGGAAAGGAA
GAGGTGGAGGTGTCTCATATCCAATTTGCAGATGAAACCCTTCTATTTTGTGATGTCCATCCTAAATTTGTGAAGAATTGGAAGTCCTTTTTGAGCTTCTACGAAAAAGC
CTCTGGGCTATCAATTAATATGCAAAAATCGAGCATTATAGGCATCAATGTGGAGGAAAGGGAAGTGGCTCGTATGGATCCAGTTTTGGAAGCTATTCGAAACAAACTTG
CCCGAAGGAAAGGTTTTCCGATTTCCAAAGGGGGAAGAACAACCCTCATCAAAGCAGTGCTCGCGAGTATCCCAGTGTATTTCTTTTCCATTTTTAGAATTCTAGTGGGT
GTTGCCAAGGATATTGAAAAAATCTTCAGAAGGTTTCTTTGGAAAGGGGGTGATGGTATCCGTGGATCTCATCTGATCAGGTGGGATTATGTTACTACTCCTGTGTCCCT
TGGAGGTCTGGGAATTGATAATCTAAGAGTAAAAAATGCAACCCTTCTTTTAAAATGGCTTTGGAGTTTTGAAAAAGAACGGGATGCGTTGTGGAGAAGAATCATTCTAA
GCAAATACGGGGCTGACTTCATTCGCAATCCCCTCTCCTATAAGCGATGGCAATCCTCGAGCCCATGGAGGGATATTGCTAGCTTGGCCGGTTTTTATAAACATAATAGA
AGATATAAGGTGGGTAGGGGTGATAAGGTTTTGTTTTGGGAGGATAACTGGATCTCTGAAAAGCCTTTAAAAGACCAATCCCTTGTATGTATCGTCTATCTATGGTTAAA
GAAGCTAAAGTCTCTGACTTATGGAATGGTCTCACCTGGGATCTCAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCACAAGCTCCAATGTGTATATAAAATTCTGCACTTCTTTATCTATCTTTTCTCTTATTGGAAACCCGGTGGCAGGCTTCAGTTGCAGTGGTCTTCAGCGGCGAT
TGGCAGTGATTCTGAAGGAGATGAAAGTAGTGGTTGTGGAGGAGGTGGAGATAGCATGAAGGTGGAGGAAACGAGGAAGTTCGTGTGCTATGGAACAAAAGGGGTTGACT
GGCAGCCCATTTCGATGACCCAAGCTCAGTGGTTAGAAAGGCCTTTTGGGAGGGAGGAAATCTGGAAAGCAGTGACGATTCTTGGAACTCAAAAAAACCCCGGTCCAGAT
GGCTTTACAGGAGAGTTCATAAAAAATTCTTGGAACACCATTAAAGAAGACTTGTTTAATGTGTTCCAGGAATTTTTTGAGAATGGCATCATTAACCGAAGAACTAATGA
AACTTACATCTGCTTGATCCCGAAGAAGGAAGTGGCTGCAAAGGTTAGTGATTTTCGCCCCATCAGCCTAGTTACTTTGCTCTATAAAGTCATCTCTAAAGTACTAGCGG
AAAGAATTAGAGTGGTTCTCCCTTTCACAATAGACAACTCCCAGATGGCCTTTATAGAAGGTAGACAGATTATGGATGCCATTATGATAGCTTCTGAGGCCGTGGATGAT
TACCGTGCTAGAAAAAGAAAAGGTTTTGTTATCAAAGTTGACTTTGAGAAGGCCTATGATAAAGTGGATTGGGAATTCCTAGACATCATTCTTGAGGCTAAAGGATTCGG
GCTTAGGTGGAGGAAGTGGGTTAAAGGTTGTTGTTCGAGTTCCAACTTTTCTATTTTGATAAACGGTAGGCCAAGAGGTAAGATCTCAGCATCTAGAGGCATTAGACAAG
GGGATCCTTTGTCTCCCTTTCTCTTTACTATAGTAGCGGATTCTCTGAGCCGTTTTATCCGAGTGGGCAGCAGTAAAGGATTCATAAAAGGTTTTAGAGTGGGAAAGGAA
GAGGTGGAGGTGTCTCATATCCAATTTGCAGATGAAACCCTTCTATTTTGTGATGTCCATCCTAAATTTGTGAAGAATTGGAAGTCCTTTTTGAGCTTCTACGAAAAAGC
CTCTGGGCTATCAATTAATATGCAAAAATCGAGCATTATAGGCATCAATGTGGAGGAAAGGGAAGTGGCTCGTATGGATCCAGTTTTGGAAGCTATTCGAAACAAACTTG
CCCGAAGGAAAGGTTTTCCGATTTCCAAAGGGGGAAGAACAACCCTCATCAAAGCAGTGCTCGCGAGTATCCCAGTGTATTTCTTTTCCATTTTTAGAATTCTAGTGGGT
GTTGCCAAGGATATTGAAAAAATCTTCAGAAGGTTTCTTTGGAAAGGGGGTGATGGTATCCGTGGATCTCATCTGATCAGGTGGGATTATGTTACTACTCCTGTGTCCCT
TGGAGGTCTGGGAATTGATAATCTAAGAGTAAAAAATGCAACCCTTCTTTTAAAATGGCTTTGGAGTTTTGAAAAAGAACGGGATGCGTTGTGGAGAAGAATCATTCTAA
GCAAATACGGGGCTGACTTCATTCGCAATCCCCTCTCCTATAAGCGATGGCAATCCTCGAGCCCATGGAGGGATATTGCTAGCTTGGCCGGTTTTTATAAACATAATAGA
AGATATAAGGTGGGTAGGGGTGATAAGGTTTTGTTTTGGGAGGATAACTGGATCTCTGAAAAGCCTTTAAAAGACCAATCCCTTGTATGTATCGTCTATCTATGGTTAAA
GAAGCTAAAGTCTCTGACTTATGGAATGGTCTCACCTGGGATCTCAATTTGA
Protein sequenceShow/hide protein sequence
MNHKLQCVYKILHFFIYLFSYWKPGGRLQLQWSSAAIGSDSEGDESSGCGGGGDSMKVEETRKFVCYGTKGVDWQPISMTQAQWLERPFGREEIWKAVTILGTQKNPGPD
GFTGEFIKNSWNTIKEDLFNVFQEFFENGIINRRTNETYICLIPKKEVAAKVSDFRPISLVTLLYKVISKVLAERIRVVLPFTIDNSQMAFIEGRQIMDAIMIASEAVDD
YRARKRKGFVIKVDFEKAYDKVDWEFLDIILEAKGFGLRWRKWVKGCCSSSNFSILINGRPRGKISASRGIRQGDPLSPFLFTIVADSLSRFIRVGSSKGFIKGFRVGKE
EVEVSHIQFADETLLFCDVHPKFVKNWKSFLSFYEKASGLSINMQKSSIIGINVEEREVARMDPVLEAIRNKLARRKGFPISKGGRTTLIKAVLASIPVYFFSIFRILVG
VAKDIEKIFRRFLWKGGDGIRGSHLIRWDYVTTPVSLGGLGIDNLRVKNATLLLKWLWSFEKERDALWRRIILSKYGADFIRNPLSYKRWQSSSPWRDIASLAGFYKHNR
RYKVGRGDKVLFWEDNWISEKPLKDQSLVCIVYLWLKKLKSLTYGMVSPGISI