; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011770 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011770
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionexosome complex component RRP43
Genome locationchr1:32532589..32536625
RNA-Seq ExpressionLag0011770
SyntenyLag0011770
Gene Ontology termsNA
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR015847 - Exoribonuclease, phosphorolytic domain 2
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033523.1 Exosome complex component RRP43 [Cucurbita argyrosperma subsp. argyrosperma]1.2e-14777.02Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL
        PPICSPIVRPGRPAEAAPVISKQLSDTISSS MIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL

Query:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP
                                                                LQIPVVALNDDGKVVFVSEEEGGENFEKE VNKE+RKLKLN +P
Subjt:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP

Query:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        FSLTCLLHKNYILADP AEEESVM+TIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQR KELQMILDEAISGMEID
Subjt:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

XP_008460772.1 PREDICTED: exosome complex component RRP43 isoform X1 [Cucumis melo]2.8e-14675.46Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSS MIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL

Query:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP
                                                                LQIPVVALNDDG+VVFVSEEEGGENFEKEPVNKEKRKLKLN +P
Subjt:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP

Query:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        FSLTCLLHK YILADP AEEESVM+TIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQR KELQ+ILDEAISGMEID
Subjt:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

XP_022928740.1 exosome complex component RRP43 [Cucurbita moschata]2.0e-14777.02Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL
        PPICSPIVRPGRPAEAAPVISKQLSDTISSS MIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL

Query:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP
                                                                LQIP VALNDDGKVVFVSEEEGGENFEKE VNKEKRKLKLN +P
Subjt:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP

Query:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        FSLTCLLHKNYILADP AEEESVM+TIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQR KELQMILDEAISGMEID
Subjt:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

XP_022967860.1 exosome complex component RRP43 [Cucurbita maxima]1.3e-14676.76Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL
        P ICSPIVRPGRPAEAAPVISKQLSDTISSS MIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL

Query:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP
                                                                LQIPVVALNDDGKVVFVSEE+GGENFEKE VNKEKRKLKLN +P
Subjt:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP

Query:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        FSLTCLLHKNYILADP AEEESVM+TIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQR KELQMILDEAISGMEID
Subjt:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

XP_023544252.1 exosome complex component RRP43 [Cucurbita pepo subsp. pepo]5.2e-14877.28Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL
        PPICSPIVRPGRPAEAAPVISKQLSDTISSS MIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL

Query:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP
                                                                LQIPVVALNDDGKVVFVSEEEGGENFEKE VNKEKRKLKLN +P
Subjt:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP

Query:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        FSLTCLLHKNYILADP AEEESVM+TIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQR KELQMILDEAISGMEID
Subjt:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

TrEMBL top hitse value%identityAlignment
A0A1S3CD66 exosome complex component RRP43 isoform X11.4e-14675.46Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSS MIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL

Query:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP
                                                                LQIPVVALNDDG+VVFVSEEEGGENFEKEPVNKEKRKLKLN +P
Subjt:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP

Query:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        FSLTCLLHK YILADP AEEESVM+TIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQR KELQ+ILDEAISGMEID
Subjt:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

A0A1S3CEE1 exosome complex component RRP43 isoform X21.4e-14675.46Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSS MIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL

Query:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP
                                                                LQIPVVALNDDG+VVFVSEEEGGENFEKEPVNKEKRKLKLN +P
Subjt:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP

Query:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        FSLTCLLHK YILADP AEEESVM+TIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQR KELQ+ILDEAISGMEID
Subjt:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

A0A6J1DFM7 exosome complex component RRP431.2e-14575.2Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFP+QF+ERH AESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL
        PPICSPIVRPGRPAEAAPVISKQLSDTISSS MIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL

Query:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP
                                                                LQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKL+ IP
Subjt:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP

Query:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        FSLTC+LHKN+ILADP AEEES+M+TIVTVVLD SGQLVSFYKPGGSVLA+TSAVQDCVALTRQR+KELQ+ILDEAISGMEID
Subjt:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

A0A6J1ESF5 exosome complex component RRP439.6e-14877.02Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL
        PPICSPIVRPGRPAEAAPVISKQLSDTISSS MIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL

Query:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP
                                                                LQIP VALNDDGKVVFVSEEEGGENFEKE VNKEKRKLKLN +P
Subjt:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP

Query:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        FSLTCLLHKNYILADP AEEESVM+TIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQR KELQMILDEAISGMEID
Subjt:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

A0A6J1HVL5 exosome complex component RRP436.2e-14776.76Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL
        P ICSPIVRPGRPAEAAPVISKQLSDTISSS MIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL

Query:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP
                                                                LQIPVVALNDDGKVVFVSEE+GGENFEKE VNKEKRKLKLN +P
Subjt:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIP

Query:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
        FSLTCLLHKNYILADP AEEESVM+TIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQR KELQMILDEAISGMEID
Subjt:  FSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

SwissProt top hitse value%identityAlignment
Q10205 Exosome complex component rrp436.4e-2437.42Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+++ P Q+    L + +R DGR++ + R+  I    +S+ANGSA+ + G    +  IK E+  P   SP+EG I  +  + P+CS   +PG P++ A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAA
        +S++L  T+  S +I+L+ L + + KAAW+ Y DI CL+ DGS FD A  +  AA
Subjt:  ISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAA

Q2KHU3 Exosome complex component RRP432.2e-3226.45Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G + +A+GSAL K+G+TT++  IK E   P  ++PD+G +  +  + P+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHLGKQRDVADKFLGFTHRGEG
         S+ ++D I +S +I   +L +  GK AW+ Y D+ CL+ DG++ DA   +  AA                                             
Subjt:  ISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHLGKQRDVADKFLGFTHRGEG

Query:  ETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPFSLT-CLLHKNYILADPNA
                                           + +Q+P V +N++  +  V+              K+K  L +   P + +  +     ++ DP  
Subjt:  ETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPFSLT-CLLHKNYILADPNA

Query:  EEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGME
        EEE +    +TVV+D  G+L   +KPGGS L   + +QDC++    R KE++ ++DE    M+
Subjt:  EEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGME

Q8TYC2 Exosome complex component Rrp421.0e-2126.14Show/hide
Query:  RPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLR
        R DGR   + R   +  G +S ANGSAL ++G+T ++  +K+EV  P  +SP+EG +AV+  + P+  P   PG P E A  +S+ +   I  S MIDL 
Subjt:  RPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLR

Query:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHLGKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLE
        EL + +G+  W+ ++DI+ LD DG+LFDA+++ + +A S                                                             
Subjt:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHLGKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLE

Query:  LVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQ
                            ++P   + DD               E E + ++   L +N  P S+T      Y+L DP  EEE +MDT +TV +  SG+
Subjt:  LVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQ

Query:  LVSFYK
        + +  K
Subjt:  LVSFYK

Q96B26 Exosome complex component RRP433.6e-3527Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   PS ++PD+G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHLGKQRDVADKFLGFTHRGEG
         S+ ++D I +S +I   +L +  GK  W+ Y D+ CLD DG++ DA   +  AA                                             
Subjt:  ISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHLGKQRDVADKFLGFTHRGEG

Query:  ETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPFSLT-CLLHKNYILADPNA
                                           + +Q+P V +N++  +  V+              K+K  L +   P + +  +     ++ DP  
Subjt:  ETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPFSLT-CLLHKNYILADPNA

Query:  EEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGME
        EEE +    +T+V+D  G+L   +KPGGS L   + +QDC++    R KE++ ++DE I  M+
Subjt:  EEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGME

Q9D753 Exosome complex component RRP432.7e-3036.5Show/hide
Query:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV
        F+ + P++++ R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   P +++PD G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH------SAQIRTALALSFNHHLEQLSYHLGKQRDVADKFLGF
         S+ ++D + +S +I   +L +  GK AW+ Y D+ CLD DG++ DA   +  AA  +      +    TALA     +L++ SY   +   VA  F  F
Subjt:  ISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSH------SAQIRTALALSFNHHLEQLSYHLGKQRDVADKFLGF

Arabidopsis top hitse value%identityAlignment
AT1G60080.1 3'-5'-exoribonuclease family protein9.9e-11359.07Show/hide
Query:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM
        MG+P+AA  DLS+EMEVDAFRR+FP++FFERHL+ES+RPDGR LGKARDT + LG VS+A+GSALAKIGSTTMLAAI+MEVMTPS +SPDEGCIA++FHM
Subjt:  MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHM

Query:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL
        PPICSP VRPGRPAEAAPVISK+LSDTI SS MIDL+EL LV GKAAWM YLDIYCLDADG+LFDAALL+A AAFS+                       
Subjt:  PPICSPIVRPGRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHL

Query:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGEN---FEKEPVNKEKRKLKLN
                                                                LQIP+VALND+G++V V+ E+  +N    EKE VNKEKRKL L 
Subjt:  GKQRDVADKFLGFTHRGEGETILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGEN---FEKEPVNKEKRKLKLN

Query:  CIPFSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID
         IPFSLTC+LHKNYILADP  EEES+MDT+VTVVLDSS Q+VSFYK GG+ LAY+SA++ CV L R+R KEL+ IL E    M+ID
Subjt:  CIPFSLTCLLHKNYILADPNAEEESVMDTIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID

AT3G07750.1 3'-5'-exoribonuclease family protein2.6e-1231.21Show/hide
Query:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGRPAEAAPVISKQ--
        F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS   PD+G +AV     P   P    R G    +   ++ Q  
Subjt:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGRPAEAAPVISKQ--

Query:  -LSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSA
         L     + A I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA +++A
Subjt:  -LSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSA

AT3G07750.2 3'-5'-exoribonuclease family protein2.6e-1231.21Show/hide
Query:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGRPAEAAPVISKQ--
        F +  +A+ +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS   PD+G +AV     P   P    R G    +   ++ Q  
Subjt:  FFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIV--RPGRPAEAAPVISKQ--

Query:  -LSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSA
         L     + A I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA +++A
Subjt:  -LSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTGCCAAATGCTGCTTCTGGGGACTTGTCGTCGGAAATGGAGGTTGATGCTTTTAGACGACTCTTCCCAATTCAATTTTTTGAGCGCCATCTTGCTGAATCAAT
ACGTCCTGATGGAAGAGCATTGGGAAAAGCTAGAGATACAACCATTGCTCTTGGACCAGTATCATCTGCGAATGGGTCAGCCCTGGCTAAGATTGGTTCTACGACAATGT
TGGCTGCTATTAAAATGGAAGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGTTGTATAGCGGTTGACTTTCATATGCCTCCAATATGCTCTCCCATTGTTAGGCCT
GGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTGTCTGATACTATTTCAAGTTCTGCGATGATTGATTTGAGAGAATTATCTCTTGTTAAAGGAAAAGCTGC
TTGGATGGCATACCTGGATATTTATTGCTTGGATGCTGATGGATCTCTTTTCGATGCTGCACTTCTGTCTGCAGCTGCTGCATTTTCTCACTCTGCTCAAATTCGAACAG
CTTTGGCCTTGTCTTTTAACCACCATCTTGAGCAATTATCATACCATTTAGGCAAGCAAAGAGATGTTGCTGACAAATTTCTAGGGTTCACCCACCGGGGTGAGGGGGAA
ACTATTTTATCCTCCCTTCTTTGGCCAATCAAAGGGAAGAATAATCTTGAACTTGTAAGTTGTAATGTGTTATCTTCTGTTGATCTCATGTCATATGTGTATGAAACATT
GCAAATCCCTGTTGTTGCTCTAAATGATGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAACCTGTCAACAAAGAGAAAAGGAAAC
TGAAATTGAACTGTATTCCTTTCTCATTAACATGCCTACTCCACAAGAACTATATCTTGGCAGACCCTAATGCAGAGGAGGAGTCTGTCATGGATACTATTGTGACCGTG
GTTTTAGATTCATCTGGTCAACTGGTGTCCTTCTACAAGCCGGGTGGATCCGTTCTTGCCTACACATCAGCTGTTCAGGATTGTGTTGCATTGACAAGACAAAGATTGAA
AGAACTACAGATGATTTTAGATGAAGCAATTTCTGGTATGGAAATTGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTGCCAAATGCTGCTTCTGGGGACTTGTCGTCGGAAATGGAGGTTGATGCTTTTAGACGACTCTTCCCAATTCAATTTTTTGAGCGCCATCTTGCTGAATCAAT
ACGTCCTGATGGAAGAGCATTGGGAAAAGCTAGAGATACAACCATTGCTCTTGGACCAGTATCATCTGCGAATGGGTCAGCCCTGGCTAAGATTGGTTCTACGACAATGT
TGGCTGCTATTAAAATGGAAGTAATGACGCCTTCCATAGAGTCACCGGATGAGGGTTGTATAGCGGTTGACTTTCATATGCCTCCAATATGCTCTCCCATTGTTAGGCCT
GGGAGACCAGCTGAAGCAGCACCTGTGATTTCAAAGCAGTTGTCTGATACTATTTCAAGTTCTGCGATGATTGATTTGAGAGAATTATCTCTTGTTAAAGGAAAAGCTGC
TTGGATGGCATACCTGGATATTTATTGCTTGGATGCTGATGGATCTCTTTTCGATGCTGCACTTCTGTCTGCAGCTGCTGCATTTTCTCACTCTGCTCAAATTCGAACAG
CTTTGGCCTTGTCTTTTAACCACCATCTTGAGCAATTATCATACCATTTAGGCAAGCAAAGAGATGTTGCTGACAAATTTCTAGGGTTCACCCACCGGGGTGAGGGGGAA
ACTATTTTATCCTCCCTTCTTTGGCCAATCAAAGGGAAGAATAATCTTGAACTTGTAAGTTGTAATGTGTTATCTTCTGTTGATCTCATGTCATATGTGTATGAAACATT
GCAAATCCCTGTTGTTGCTCTAAATGATGATGGAAAAGTAGTATTTGTCTCTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAACCTGTCAACAAAGAGAAAAGGAAAC
TGAAATTGAACTGTATTCCTTTCTCATTAACATGCCTACTCCACAAGAACTATATCTTGGCAGACCCTAATGCAGAGGAGGAGTCTGTCATGGATACTATTGTGACCGTG
GTTTTAGATTCATCTGGTCAACTGGTGTCCTTCTACAAGCCGGGTGGATCCGTTCTTGCCTACACATCAGCTGTTCAGGATTGTGTTGCATTGACAAGACAAAGATTGAA
AGAACTACAGATGATTTTAGATGAAGCAATTTCTGGTATGGAAATTGACTAA
Protein sequenceShow/hide protein sequence
MGLPNAASGDLSSEMEVDAFRRLFPIQFFERHLAESIRPDGRALGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSIESPDEGCIAVDFHMPPICSPIVRP
GRPAEAAPVISKQLSDTISSSAMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHSAQIRTALALSFNHHLEQLSYHLGKQRDVADKFLGFTHRGEGE
TILSSLLWPIKGKNNLELVSCNVLSSVDLMSYVYETLQIPVVALNDDGKVVFVSEEEGGENFEKEPVNKEKRKLKLNCIPFSLTCLLHKNYILADPNAEEESVMDTIVTV
VLDSSGQLVSFYKPGGSVLAYTSAVQDCVALTRQRLKELQMILDEAISGMEID