; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011778 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011778
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationchr1:32599708..32601937
RNA-Seq ExpressionLag0011778
SyntenyLag0011778
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025876.1 uncharacterized protein E6C27_scaffold34G001550 [Cucumis melo var. makuwa]1.8e-4035.66Show/hide
Query:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDN--NIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCKEHLKK
        LTL+    +N   I + +D+DV W++         D  +V+D     +  N       +  +         ++ +  ++   ++ +  G +F  K  LKK
Subjt:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDN--NIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCKEHLKK

Query:  VVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQWKT------------------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGT
         +  LAL  SF+  T++SN   + + C D SC W                    H +NISYDKAW GRE ALN +RG+PE SYA +  F   LI  N GT
Subjt:  VVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQWKT------------------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGT

Query:  YTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA
        YTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++KNK+ GT ++ CT DG++
Subjt:  YTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA

KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.8e-3730.65Show/hide
Query:  SICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVD---VQGVDNNIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCK
        S+ RLTL+  + +N   I + +D+DV W++         D  +VVD      + N  +       +     +N   ++ +  ++   ++ +  G +F  K
Subjt:  SICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVD---VQGVDNNIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCK

Query:  EHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQWKT-----------------------------------------------------------
          LKK +  LAL  SF+  T++SN   + + C D +C W                                                             
Subjt:  EHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQWKT-----------------------------------------------------------

Query:  ------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTF
              H++N+SYDKAWRGRE ALN +RG+PE SYA +  F   LI  N GTYTA+E D    FKF+FM +A SI+ W +C+PVISVDG ++KNK+ GT 
Subjt:  ------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTF

Query:  LTACTFDGSA
        ++ACT DG++
Subjt:  LTACTFDGSA

KAA0067552.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]1.7e-3531.41Show/hide
Query:  SICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVD---VQGVDNNIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCK
        SIC LTL+    +N   I + +D+DV W++         D  +VVD      + N  +       +     KN   ++ +  ++   ++ +  G +F  K
Subjt:  SICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVD---VQGVDNNIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCK

Query:  EHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQW-------------------------------------------------KT----------
          LKK +  LAL  SF+  T++SN   + + C D SC W                                                 KT          
Subjt:  EHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQW-------------------------------------------------KT----------

Query:  --------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSG
                H +NISYDKAWRGRE ALN ++G+PE SYA +  F   LI  N GTYTA+E D   RFKF+FM++  SI+ W + +PVISVDG ++KN + G
Subjt:  --------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSG

Query:  TFLTACTFDGSA
        T ++ACT DG++
Subjt:  TFLTACTFDGSA

TYK22587.1 uncharacterized protein E5676_scaffold195G00040 [Cucumis melo var. makuwa]2.7e-4136.05Show/hide
Query:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDN--NIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCKEHLKK
        LTL+    +N   I + +D+DV W++         D  +V+D     +  N       +  +         ++ +  ++   ++ +  G +F  K  LKK
Subjt:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDN--NIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCKEHLKK

Query:  VVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQWKT------------------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGT
         +  LAL  SF+  T++SN   + + C D SC W                    H +NISYDKAWRGRE ALN +RG+PE SYA +  F   LI  N GT
Subjt:  VVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQWKT------------------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGT

Query:  YTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA
        YTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++KNK+ GT ++ CT DG++
Subjt:  YTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]2.9e-3530.19Show/hide
Query:  LNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDN--NIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEG
        LN  +     +LTL+    +N   I + +D+DV W++         D  +V+D     +  N       +  +         ++ +  ++   ++ +  G
Subjt:  LNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDN--NIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEG

Query:  CVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQW-------------------------------------------------KT----
         +F  K  LKK +  LAL  SF+  T++SN   + + C D SC W                                                 KT    
Subjt:  CVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQW-------------------------------------------------KT----

Query:  --------------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSL
                      H +NISYDKAW GRE ALN +RG+PE SYA +  F   LI  N GTYTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++
Subjt:  --------------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSL

Query:  KNKFSGTFLTACTFDGSA
        KNK+ GT ++ CT DG++
Subjt:  KNKFSGTFLTACTFDGSA

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958991.4e-3530.19Show/hide
Query:  LNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDN--NIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEG
        LN  +     +LTL+    +N   I + +D+DV W++         D  +V+D     +  N       +  +         ++ +  ++   ++ +  G
Subjt:  LNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDN--NIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEG

Query:  CVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQW-------------------------------------------------KT----
         +F  K  LKK +  LAL  SF+  T++SN   + + C D SC W                                                 KT    
Subjt:  CVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQW-------------------------------------------------KT----

Query:  --------------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSL
                      H +NISYDKAW GRE ALN +RG+PE SYA +  F   LI  N GTYTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++
Subjt:  --------------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSL

Query:  KNKFSGTFLTACTFDGSA
        KNK+ GT ++ CT DG++
Subjt:  KNKFSGTFLTACTFDGSA

A0A5A7SJA0 Uncharacterized protein8.6e-4135.66Show/hide
Query:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDN--NIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCKEHLKK
        LTL+    +N   I + +D+DV W++         D  +V+D     +  N       +  +         ++ +  ++   ++ +  G +F  K  LKK
Subjt:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDN--NIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCKEHLKK

Query:  VVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQWKT------------------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGT
         +  LAL  SF+  T++SN   + + C D SC W                    H +NISYDKAW GRE ALN +RG+PE SYA +  F   LI  N GT
Subjt:  VVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQWKT------------------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGT

Query:  YTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA
        YTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++KNK+ GT ++ CT DG++
Subjt:  YTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA

A0A5A7VAU3 MuDRA-like transposase8.9e-3830.65Show/hide
Query:  SICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVD---VQGVDNNIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCK
        S+ RLTL+  + +N   I + +D+DV W++         D  +VVD      + N  +       +     +N   ++ +  ++   ++ +  G +F  K
Subjt:  SICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVD---VQGVDNNIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCK

Query:  EHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQWKT-----------------------------------------------------------
          LKK +  LAL  SF+  T++SN   + + C D +C W                                                             
Subjt:  EHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQWKT-----------------------------------------------------------

Query:  ------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTF
              H++N+SYDKAWRGRE ALN +RG+PE SYA +  F   LI  N GTYTA+E D    FKF+FM +A SI+ W +C+PVISVDG ++KNK+ GT 
Subjt:  ------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTF

Query:  LTACTFDGSA
        ++ACT DG++
Subjt:  LTACTFDGSA

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like8.3e-3631.41Show/hide
Query:  SICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVD---VQGVDNNIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCK
        SIC LTL+    +N   I + +D+DV W++         D  +VVD      + N  +       +     KN   ++ +  ++   ++ +  G +F  K
Subjt:  SICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVD---VQGVDNNIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCK

Query:  EHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQW-------------------------------------------------KT----------
          LKK +  LAL  SF+  T++SN   + + C D SC W                                                 KT          
Subjt:  EHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQW-------------------------------------------------KT----------

Query:  --------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSG
                H +NISYDKAWRGRE ALN ++G+PE SYA +  F   LI  N GTYTA+E D   RFKF+FM++  SI+ W + +PVISVDG ++KN + G
Subjt:  --------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGTYTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSG

Query:  TFLTACTFDGSA
        T ++ACT DG++
Subjt:  TFLTACTFDGSA

A0A5D3DFW1 Uncharacterized protein1.3e-4136.05Show/hide
Query:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDN--NIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCKEHLKK
        LTL+    +N   I + +D+DV W++         D  +V+D     +  N       +  +         ++ +  ++   ++ +  G +F  K  LKK
Subjt:  LTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDN--NIHNGGGAVASSSQGEKNFEFVNSDGIDALTDIVSVTEGCVFSCKEHLKK

Query:  VVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQWKT------------------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGT
         +  LAL  SF+  T++SN   + + C D SC W                    H +NISYDKAWRGRE ALN +RG+PE SYA +  F   LI  N GT
Subjt:  VVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQWKT------------------HEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGT

Query:  YTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA
        YTA+E D   RFKF+FM++A SI+ W +C+PVISVDG ++KNK+ GT ++ CT DG++
Subjt:  YTAQEVDSNDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCCATAGCTGGAAGAGTTCGCATGCCTGCGAACAATAGGGTATGTGCTGCGAATTACCTCAATTTGGCGGACAGTAGTAGTATCTGCAGGTTGACACTCTTTAG
GAATTGGTCAAGCAACCCGATAAATATAGTCCTCTCAGAAGACAGGGATGTCTTTTGGATGGTAAACGGGTTTCAGAATGGCACGTATAGGGACTGTTGCTTAGTTGTCG
ACGTGCAGGGGGTAGATAATAATATACACAACGGGGGAGGGGCAGTTGCAAGTTCATCCCAGGGGGAGAAAAATTTTGAGTTTGTCAACTCAGATGGGATTGATGCATTG
ACCGACATAGTATCCGTAACAGAGGGGTGTGTATTTTCATGCAAAGAACATCTCAAGAAGGTAGTCTCTTCACTGGCTCTGAAAGGGAGTTTCCAATTCAAGACAATTAA
ATCCAATAGCATACAGTATACAGTGGCATGCATAGACGACTCATGCCAATGGAAAACGCACGAGATCAATATCAGTTATGACAAAGCATGGAGGGGTAGAGAAAAGGCGT
TAAATGAGTTGAGAGGATCTCCTGAAGTGTCTTATGCGCAAATTCCGTTGTTTGATGCCAGGTTGATCGAAAGGAATTCAGGTACGTACACCGCCCAGGAAGTTGATTCA
AATGACAGGTTCAAGTTCTTCTTCATGAGTATTGCAACATCCATAAACGGGTGGAAACACTGTCTCCCAGTTATTTCTGTAGATGGTACATCTTTGAAGAATAAATTCAG
TGGCACCTTTTTGACGGCCTGCACATTTGATGGGTCGGCGGGAGGAGGCCTACACGAAGGCGATGGCTGGAGGTTGGATCGGCGGGAGGTGGGGGTCGGCGGTCTGTACG
AAGAAGGATTGGCATTTGTGGGAAGATGGAGGGTTTTGCTTGTCTTGAAGAGGGCTGTTTGTGGGAGATGGAGGGTTTTGCTGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGCCATAGCTGGAAGAGTTCGCATGCCTGCGAACAATAGGGTATGTGCTGCGAATTACCTCAATTTGGCGGACAGTAGTAGTATCTGCAGGTTGACACTCTTTAG
GAATTGGTCAAGCAACCCGATAAATATAGTCCTCTCAGAAGACAGGGATGTCTTTTGGATGGTAAACGGGTTTCAGAATGGCACGTATAGGGACTGTTGCTTAGTTGTCG
ACGTGCAGGGGGTAGATAATAATATACACAACGGGGGAGGGGCAGTTGCAAGTTCATCCCAGGGGGAGAAAAATTTTGAGTTTGTCAACTCAGATGGGATTGATGCATTG
ACCGACATAGTATCCGTAACAGAGGGGTGTGTATTTTCATGCAAAGAACATCTCAAGAAGGTAGTCTCTTCACTGGCTCTGAAAGGGAGTTTCCAATTCAAGACAATTAA
ATCCAATAGCATACAGTATACAGTGGCATGCATAGACGACTCATGCCAATGGAAAACGCACGAGATCAATATCAGTTATGACAAAGCATGGAGGGGTAGAGAAAAGGCGT
TAAATGAGTTGAGAGGATCTCCTGAAGTGTCTTATGCGCAAATTCCGTTGTTTGATGCCAGGTTGATCGAAAGGAATTCAGGTACGTACACCGCCCAGGAAGTTGATTCA
AATGACAGGTTCAAGTTCTTCTTCATGAGTATTGCAACATCCATAAACGGGTGGAAACACTGTCTCCCAGTTATTTCTGTAGATGGTACATCTTTGAAGAATAAATTCAG
TGGCACCTTTTTGACGGCCTGCACATTTGATGGGTCGGCGGGAGGAGGCCTACACGAAGGCGATGGCTGGAGGTTGGATCGGCGGGAGGTGGGGGTCGGCGGTCTGTACG
AAGAAGGATTGGCATTTGTGGGAAGATGGAGGGTTTTGCTTGTCTTGAAGAGGGCTGTTTGTGGGAGATGGAGGGTTTTGCTGATTTGA
Protein sequenceShow/hide protein sequence
MSAIAGRVRMPANNRVCAANYLNLADSSSICRLTLFRNWSSNPINIVLSEDRDVFWMVNGFQNGTYRDCCLVVDVQGVDNNIHNGGGAVASSSQGEKNFEFVNSDGIDAL
TDIVSVTEGCVFSCKEHLKKVVSSLALKGSFQFKTIKSNSIQYTVACIDDSCQWKTHEINISYDKAWRGREKALNELRGSPEVSYAQIPLFDARLIERNSGTYTAQEVDS
NDRFKFFFMSIATSINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSAGGGLHEGDGWRLDRREVGVGGLYEEGLAFVGRWRVLLVLKRAVCGRWRVLLI