CuGenDBv2

Gene ID	Lag0011791
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	ABC transporter A family member 1
Genome location	chr1:33032378..33033323
RNA-Seq Expression	Lag0011791
Synteny	Lag0011791
Gene Ontology terms	GO:0055085 - transmembrane transport (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function) GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011653432.1 ABC transporter A family member 1 isoform X1 [Cucumis sativus]

3.4e-36

97.33

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Query:  RNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
        +NLNCSNPKIKGAVVFHEQGP+LFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
Subjt:  RNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT

XP_022967690.1 ABC transporter A family member 1 [Cucurbita maxima]

1.7e-35

92.31

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Query:  SLFRNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
        ++   LNCSNPKIKGAVVFHEQGP+LFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
Subjt:  SLFRNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT

XP_031740232.1 ABC transporter A family member 1 isoform X2 [Cucumis sativus]

3.4e-36

97.33

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Query:  RNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
        +NLNCSNPKIKGAVVFHEQGP+LFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
Subjt:  RNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT

XP_038881443.1 ABC transporter A family member 1 isoform X1 [Benincasa hispida]

2.0e-36

93.59

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Query:  SLFRNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
        +L +N+NCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELG TNIPTMQYSFSGFLT
Subjt:  SLFRNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT

XP_038881444.1 ABC transporter A family member 1 isoform X2 [Benincasa hispida]

2.0e-36

93.59

Show/hide

Query:  SLFRNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
        +L +N+NCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELG TNIPTMQYSFSGFLT
Subjt:  SLFRNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYE2 Uncharacterized protein

1.7e-36

97.33

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Query:  RNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
        +NLNCSNPKIKGAVVFHEQGP+LFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
Subjt:  RNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT

A0A5A7UJN7 ABC transporter A family member 1 isoform X7

1.1e-35

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Query:  RNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
        +NLNCSNPKIKGAVVFHEQGP+LFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLE GATNIPTMQYSFSGFLT
Subjt:  RNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT

A0A6J1EKF6 ABC transporter A family member 1 isoform X1

8.3e-36

92.31

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Query:  SLFRNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
        ++   LNCSNPKIKGAVVFHEQGP+LFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
Subjt:  SLFRNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT

A0A6J1EPK6 ABC transporter A family member 1 isoform X2

8.3e-36

92.31

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Query:  SLFRNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
        ++   LNCSNPKIKGAVVFHEQGP+LFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
Subjt:  SLFRNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT

A0A6J1HV62 ABC transporter A family member 1

8.3e-36

92.31

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Query:  SLFRNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
        ++   LNCSNPKIKGAVVFHEQGP+LFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
Subjt:  SLFRNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT

SwissProt top hits

e value

%identity

Alignment

Q84M24 ABC transporter A family member 1

9.7e-34

87.5

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Query:  NCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
        NCSNPKIKGAVVFHEQGP LFDYSIRLNHTWAF+GFPNV+SIMD NGPY+NDLE+G   IPTMQYSFSGFLT
Subjt:  NCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT

Arabidopsis top hits

e value

%identity

Alignment

AT2G41700.1 ATP-binding cassette A1

6.9e-35

87.5

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Query:  NCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
        NCSNPKIKGAVVFHEQGP LFDYSIRLNHTWAF+GFPNV+SIMD NGPY+NDLE+G   IPTMQYSFSGFLT
Subjt:  NCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT

AT2G41700.2 ATP-binding cassette A1

6.9e-35

87.5

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Query:  NCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT
        NCSNPKIKGAVVFHEQGP LFDYSIRLNHTWAF+GFPNV+SIMD NGPY+NDLE+G   IPTMQYSFSGFLT
Subjt:  NCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLT

Sequences

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CDS sequence

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ATGATCAAACCATTTCATTCTTTATTCAGGAACTTGAACTGTTCAAATCCCAAAATTAAAGGAGCCGTGGTATTCCATGAACAAGGTCCAAAGTTATTTGATTATAGCAT
TCGCCTCAATCATACTTGGGCTTTCTCAGGATTTCCTAATGTTAGATCCATCATGGACATGAATGGTCCGTATCTCAATGACTTGGAGCTGGGTGCAACTAACATACCAA
CAATGCAGTATAGCTTCAGTGGATTTTTAACTTGTTTCTACTTGTGCGTGGGTGTTTTTGTTCCTGGGCAATCCATTCGTGCGTGGGTATTTCTTCTGCCTTGTGTTGCA
TGGGTATTTCTGTCCTGTGTGGCATTACTGCCCGTGGGTATTTCTGCTTGTGTTGAGTTTCTACCAGTGGATATTTCTCCTGTATTGCAGTGGATATTTCTGTTTTCTGC
CCTATTTTTGCTCCCAGTTTTCCCCTTGGTGAATCATCCTTGTAATTGGCACTGTCAGACTTCACCAAAGGTCACTAAAGTTCTTGAAGATATTAATAAAAGGCTAAATT
ATAAAAAATACCCCTGA

mRNA sequence

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Protein sequence

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MIKPFHSLFRNLNCSNPKIKGAVVFHEQGPKLFDYSIRLNHTWAFSGFPNVRSIMDMNGPYLNDLELGATNIPTMQYSFSGFLTCFYLCVGVFVPGQSIRAWVFLLPCVA
WVFLSCVALLPVGISACVEFLPVDISPVLQWIFLFSALFLLPVFPLVNHPCNWHCQTSPKVTKVLEDINKRLNYKKYP

Lag0011791 (gene) of Sponge gourd (AG-4) v1 genome