| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 6.1e-88 | 34.85 | Show/hide |
Query: NLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKP
N L S+KLDR NY LW+++V+P+++ KL+G++ PE I D K N + W A +Q L+GW+ NSMT EI TQ++ + +K
Subjt: NLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKP
Query: LWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG-NISMNLTSTKLASINVASTEGQKGGMHT----
LWD Q +RSQ Y + RKG MKM +YL MK L Q L G + N KL+ S + + T
Subjt: LWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG-NISMNLTSTKLASINVASTEGQKGGMHT----
Query: ----SNPNNYNQN-SGFASNNSQTRGYSSN---RGNRYRS-RGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVIQEPTSS
+N N N + +N S RG SSN RG+ R RG P CQ+CG H + C HR+DK T +N ++
Subjt: ----SNPNNYNQN-SGFASNNSQTRGYSSN---RGNRYRS-RGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVIQEPTSS
Query: NPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQDNPVLV
+ A + S++D WY DSGASNHV K +++VVGNG K+ I GS+ +K +L L DIL+VP++ KNL+SVSK+ DN +LV
Subjt: NPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQDNPVLV
Query: EFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDMWHK
EF + CFVK+K + +V L G L++GLY+L +R+ ++V +S WH+
Subjt: EFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDMWHK
Query: RLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRADAFS
RLGHP+ K+L++VL C +++ SFCEAC++GK H LPF S S A L+LVH+D+WGP PI ++ G+ YY+ F+DD+SR+TWI+PLK +++
Subjt: RLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRADAFS
Query: VFTQFKAQAEKQYNTVLKTLRCDGGGEYKPIIQFAKE
F QFK E Q+N +K ++CDGGGEYKP+ + A E
Subjt: VFTQFKAQAEKQYNTVLKTLRCDGGGEYKPIIQFAKE
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| PNX76291.1 gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium pratense] | 2.2e-90 | 33.64 | Show/hide |
Query: NLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKP
N L S+KLDR NY LWQ++V+PI++ +L+G++ K PE I S K+ NPE++ W A +Q L+GWL NSMT I TQ++ + +
Subjt: NLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKP
Query: LWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG---------------------------------
LWD Q +RSQ Y + TRKG MKM +YL MK L Q L G
Subjt: LWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG---------------------------------
Query: ----NISMNLTSTKLASINVASTEGQKGGMHTSNPNNYNQNSGFASNNSQTRGYSSNRGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKAN
N NLT A+ NVA +G N +N N+ + +N+ RG + R RGR + + CQ+CG H + C +R+DK
Subjt: ----NISMNLTSTKLASINVASTEGQKGGMHTSNPNNYNQNSGFASNNSQTRGYSSNRGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKAN
Query: SNTQDHTNQTSAQPTVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDIL
S + N + A + S++D WY DSGASNHV K ++++VGNG K+ I GS+ +K +L L DIL
Subjt: SNTQDHTNQTSAQPTVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDIL
Query: FVPHMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRR
+VP + KNL+SVSK+ DN +LVEF + CFVK+K + + L G L++GLY+L E +
Subjt: FVPHMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRR
Query: DNGVLINVIQSILLTCKVDMWHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYI
D+ +++ +S WH++LGHP+ K+L+ VL CN ++ SFCEAC++GK H LPF S S A +L+LVH+D+WGP PI S+ G+ YY+
Subjt: DNGVLINVIQSILLTCKVDMWHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYI
Query: AFLDDYSRYTWIFPLKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPIIQFAKE
F+DD++R+TWI+PLK ++D F QFK E Q++ +KT++CDGGGEYKP+ + A E
Subjt: AFLDDYSRYTWIFPLKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPIIQFAKE
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| PNX78574.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense] | 7.7e-91 | 35.6 | Show/hide |
Query: SIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKPLWDSIQE
S+ LDR N+ LW+++V+PI++ +L+G++ PE I + E G K+ NP++ W A +Q ++GWL N+MT +Q++ + +K LW+ Q
Subjt: SIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKPLWDSIQE
Query: YFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG-NISMNLTSTKLA-SINVASTEGQKGGM-------HTSNP
+RS+ Y R TRKG KM +YL MK L Q L G + N KL+ IN++ + Q + ++
Subjt: YFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG-NISMNLTSTKLA-SINVASTEGQKGGM-------HTSNP
Query: NNYNQNSGF-ASNNSQTRGYSSN-----RGNRYR-SRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVIQEPTSSNPTAL
NN N+N+ +N +Q RG N RG+ +R +RG P+N ICQ+C K GHT + C HRYDK+ +T + + V ++ T + A
Subjt: NNYNQNSGF-ASNNSQTRGYSSN-----RGNRYR-SRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVIQEPTSSNPTAL
Query: MPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQDNPVLVEFHDV
+ + QD WY DSGASNHV K ++++VGNG K+ I GS+ +K NL L D+L+VP + KNL+SVSK+T DN ++VEF +
Subjt: MPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQDNPVLVEFHDV
Query: FCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDMWHKRLGHP
CFVK+K + +V L G L++GLY+ LS +T P V SV+ + WH++LGHP
Subjt: FCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDMWHKRLGHP
Query: SPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRADAFSVFTQF
S +L++VL ICN + ++ FCEAC+ GKSH LPF S S A VL+L+H+D+WGP PI S G+ YY+ F+DD SR+TWI+PLK ++D F QF
Subjt: SPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRADAFSVFTQF
Query: KAQAEKQYNTVLKTLRCDGGGEYKPIIQFAKE
K E Q+N +K ++CDGGGE+KP+ + A E
Subjt: KAQAEKQYNTVLKTLRCDGGGEYKPIIQFAKE
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| PNX94503.1 putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense] | 1.0e-90 | 34.22 | Show/hide |
Query: NLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKP
N L S+KLDR N+ LW+++V+P+++ K +G++ P+ + D + NP+Y W A +Q L+GWL NSMT +I TQV+ + +K
Subjt: NLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKP
Query: LWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG-NISMNLTSTKLA----------SINVASTEGQ
LWD Q +RS+ Y + T K MKM +YL MK L Q L G + N KL+ + + E +
Subjt: LWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG-NISMNLTSTKLA----------SINVASTEGQ
Query: KGGMHTSNPNNYNQNSGFASNNSQ----------TRGYSSN--RGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQP
++ N N N ++ FAS N RG +S RG R R+R P RPICQ+CGK GHT C++R+DK+ + + +
Subjt: KGGMHTSNPNNYNQNSGFASNNSQ----------TRGYSSN--RGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQP
Query: TVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSK
+ P QD WY DSGASNHV G+L ++++VGNG K+ I GST + ++ L+++L+VP + KNL+SVSK
Subjt: TVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSK
Query: ITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILL
+T DN LVEF + +C+VK+K + + L G+L++GLY+L E PP D P S++
Subjt: ITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILL
Query: TCKVDMWHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFP
++WH++LGHP+ K+L +VL N ++ +FCEAC+FGK H LPF S S A LDL+H+D+WGP PI S + YY+ FLDD+SR+TWIFP
Subjt: TCKVDMWHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFP
Query: LKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPI
LK +++ F QFK E Q+N +K +RCDGGGEYKP+
Subjt: LKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPI
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| PNY01489.1 copia-like polyprotein, partial [Trifolium pratense] | 4.0e-87 | 34.54 | Show/hide |
Query: NLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKP
N L + S+KLDR NY LW+++V+P+++ K +G++ PE + D K NP++ W+A +Q L+GWL NSM +I TQ++ + +K
Subjt: NLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKP
Query: LWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG-NISMNLTSTKLA-SINVASTEGQKGGM-HTSN
LWD Q ++S+ Y + TRKG MKM EYL MK L Q L G + N KL+ IN++ + Q + S
Subjt: LWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG-NISMNLTSTKLA-SINVASTEGQKGGM-HTSN
Query: PNNYNQNSGFASNNSQTRGYSSN-RGNRYRSRGRYSPYTPNNRPI-------------CQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVIQEP
+ N SG N S + RGN++ SRG + N R + CQ+C GHT V C +R+D++ + ++++ + Q
Subjt: PNNYNQNSGFASNNSQTRGYSSN-RGNRYRSRGRYSPYTPNNRPI-------------CQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVIQEP
Query: TSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQDNP
+ +A + P QD WY DSGASNHV K ++++VGNG K+ I GST + L L D+L+VP + KNL+SVSK+T DN
Subjt: TSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQDNP
Query: VLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDM
+ VEF C VK+K + + L G+L++GLY+ LS+V ++ P V SV+ +
Subjt: VLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDM
Query: WHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRAD
WH++LGHP+ K+L +VL CN ++ SFCEAC+FGK H LPF S S L L+HSD+WGP PI S G+ YY+ F+DD+SR+TWIFPLK ++D
Subjt: WHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRAD
Query: AFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPI
F QFK AE Q+N +K ++CDGGGEYK +
Subjt: AFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPI
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3LCM1 Gag/pol polyprotein-maize retrotransposon Hopscotch (Fragment) | 1.1e-90 | 33.64 | Show/hide |
Query: NLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKP
N L S+KLDR NY LWQ++V+PI++ +L+G++ K PE I S K+ NPE++ W A +Q L+GWL NSMT I TQ++ + +
Subjt: NLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKP
Query: LWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG---------------------------------
LWD Q +RSQ Y + TRKG MKM +YL MK L Q L G
Subjt: LWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG---------------------------------
Query: ----NISMNLTSTKLASINVASTEGQKGGMHTSNPNNYNQNSGFASNNSQTRGYSSNRGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKAN
N NLT A+ NVA +G N +N N+ + +N+ RG + R RGR + + CQ+CG H + C +R+DK
Subjt: ----NISMNLTSTKLASINVASTEGQKGGMHTSNPNNYNQNSGFASNNSQTRGYSSNRGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKAN
Query: SNTQDHTNQTSAQPTVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDIL
S + N + A + S++D WY DSGASNHV K ++++VGNG K+ I GS+ +K +L L DIL
Subjt: SNTQDHTNQTSAQPTVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDIL
Query: FVPHMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRR
+VP + KNL+SVSK+ DN +LVEF + CFVK+K + + L G L++GLY+L E +
Subjt: FVPHMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRR
Query: DNGVLINVIQSILLTCKVDMWHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYI
D+ +++ +S WH++LGHP+ K+L+ VL CN ++ SFCEAC++GK H LPF S S A +L+LVH+D+WGP PI S+ G+ YY+
Subjt: DNGVLINVIQSILLTCKVDMWHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYI
Query: AFLDDYSRYTWIFPLKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPIIQFAKE
F+DD++R+TWI+PLK ++D F QFK E Q++ +KT++CDGGGEYKP+ + A E
Subjt: AFLDDYSRYTWIFPLKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPIIQFAKE
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| A0A2K3LJ49 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.7e-91 | 35.6 | Show/hide |
Query: SIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKPLWDSIQE
S+ LDR N+ LW+++V+PI++ +L+G++ PE I + E G K+ NP++ W A +Q ++GWL N+MT +Q++ + +K LW+ Q
Subjt: SIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKPLWDSIQE
Query: YFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG-NISMNLTSTKLA-SINVASTEGQKGGM-------HTSNP
+RS+ Y R TRKG KM +YL MK L Q L G + N KL+ IN++ + Q + ++
Subjt: YFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG-NISMNLTSTKLA-SINVASTEGQKGGM-------HTSNP
Query: NNYNQNSGF-ASNNSQTRGYSSN-----RGNRYR-SRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVIQEPTSSNPTAL
NN N+N+ +N +Q RG N RG+ +R +RG P+N ICQ+C K GHT + C HRYDK+ +T + + V ++ T + A
Subjt: NNYNQNSGF-ASNNSQTRGYSSN-----RGNRYR-SRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVIQEPTSSNPTAL
Query: MPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQDNPVLVEFHDV
+ + QD WY DSGASNHV K ++++VGNG K+ I GS+ +K NL L D+L+VP + KNL+SVSK+T DN ++VEF +
Subjt: MPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQDNPVLVEFHDV
Query: FCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDMWHKRLGHP
CFVK+K + +V L G L++GLY+ LS +T P V SV+ + WH++LGHP
Subjt: FCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDMWHKRLGHP
Query: SPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRADAFSVFTQF
S +L++VL ICN + ++ FCEAC+ GKSH LPF S S A VL+L+H+D+WGP PI S G+ YY+ F+DD SR+TWI+PLK ++D F QF
Subjt: SPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRADAFSVFTQF
Query: KAQAEKQYNTVLKTLRCDGGGEYKPIIQFAKE
K E Q+N +K ++CDGGGE+KP+ + A E
Subjt: KAQAEKQYNTVLKTLRCDGGGEYKPIIQFAKE
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| A0A2K3MUJ9 Putative retrotransposon Ty1-copia subclass protein (Fragment) | 4.9e-91 | 34.22 | Show/hide |
Query: NLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKP
N L S+KLDR N+ LW+++V+P+++ K +G++ P+ + D + NP+Y W A +Q L+GWL NSMT +I TQV+ + +K
Subjt: NLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKP
Query: LWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG-NISMNLTSTKLA----------SINVASTEGQ
LWD Q +RS+ Y + T K MKM +YL MK L Q L G + N KL+ + + E +
Subjt: LWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRL------------------QALKG-NISMNLTSTKLA----------SINVASTEGQ
Query: KGGMHTSNPNNYNQNSGFASNNSQ----------TRGYSSN--RGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQP
++ N N N ++ FAS N RG +S RG R R+R P RPICQ+CGK GHT C++R+DK+ + + +
Subjt: KGGMHTSNPNNYNQNSGFASNNSQ----------TRGYSSN--RGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQP
Query: TVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSK
+ P QD WY DSGASNHV G+L ++++VGNG K+ I GST + ++ L+++L+VP + KNL+SVSK
Subjt: TVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSK
Query: ITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILL
+T DN LVEF + +C+VK+K + + L G+L++GLY+L E PP D P S++
Subjt: ITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILL
Query: TCKVDMWHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFP
++WH++LGHP+ K+L +VL N ++ +FCEAC+FGK H LPF S S A LDL+H+D+WGP PI S + YY+ FLDD+SR+TWIFP
Subjt: TCKVDMWHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFP
Query: LKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPI
LK +++ F QFK E Q+N +K +RCDGGGEYKP+
Subjt: LKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPI
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| A0A803P4G6 Uncharacterized protein | 8.3e-91 | 35.77 | Show/hide |
Query: PTFANLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKM--PNPEYDLWLAANQLLVGWLYNSMTPEITTQVMG
P + LNQ S+KLDR N+ LW+ +V I++ Y+++G LS P P + P+ +G+++ NPE++ W+ +QLL+GWLY+SMT I T+VMG
Subjt: PTFANLLNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKM--PNPEYDLWLAANQLLVGWLYNSMTPEITTQVMG
Query: HDEAKPLW-DSIQE---YFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTM-------KRLQALKGNISMNLTSTKLASINVASTEGQKGGMHTSNPNNY
A LW D E ++ S +Y +++Q + D + +R+Q+L+G + A++ VA T Q G + N
Subjt: HDEAKPLW-DSIQE---YFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTM-------KRLQALKGNISMNLTSTKLASINVASTEGQKGGMHTSNPNNY
Query: NQNSGFASNNSQTRGYSSNRGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVIQEPTSSNPTALMPYPESLQDP
N N G RG+R RSRGR Y N+RP CQ+CGK GH+ +C++RYD+ N H Q A + P+ L
Subjt: NQNSGFASNNSQTRGYSSNRGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVIQEPTSSNPTALMPYPESLQDP
Query: SWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLL-LKDILFVPHMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNS
+W++DSGASNH+ + +S K + VG+G+K+ I +G+ ++K LL LK +L VP + KNLISV K+T DN VL+EF+ C VK+K +
Subjt: SWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLL-LKDILFVPHMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNS
Query: SEVCLIGKLENGLYRLLEEH----EALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDMWHKRLGHPSPKIL
+V L G L++GLY++ H AL+ +T V+PTV N + + S L K+D+WH+RLGHPS K+L
Subjt: SEVCLIGKLENGLYRLLEEH----EALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDMWHKRLGHPSPKIL
Query: NQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRADAFSVFTQFKAQAE
QVL N NE +FC+AC++GKSH LPF S +RA VLDL+H+DLWGP P+ S+ + YYI F+D +SRYTW++PLK +++A F QFK E
Subjt: NQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRADAFSVFTQFKAQAE
Query: ---KQYNTVLKTLRC
++Y+T K +C
Subjt: ---KQYNTVLKTLRC
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| A0A803PEH4 Uncharacterized protein | 1.2e-100 | 37.04 | Show/hide |
Query: LNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKPLW
LNQ S+KLDR NY LW+ +V I++ ++L G+LS +++ PP ++ NPEY+ W+ +QLL+GWLY+SMT I T+VMG A L
Subjt: LNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKPLW
Query: DSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMK---RLQALKG----------NISMNLTSTKLASI--------------------------
+++ + S+S+ D R ++Q TRKG+ M EYL K + AL G N+ L + L+ +
Subjt: DSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMK---RLQALKG----------NISMNLTSTKLASI--------------------------
Query: ---------NVASTEGQKGGMHTSNPNNYNQNSGFASNNSQTRG---YSSNRGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKA--NSNTQ
N A++ + M + NN + GF S N+ T +S++RG R RGR +RP CQ+ GK GHT +C++R+D++ S+
Subjt: ---------NVASTEGQKGGMHTSNPNNYNQNSGFASNNSQTRG---YSSNRGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKA--NSNTQ
Query: DHTNQTSAQPTVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRN-LLLKDILFVP
+ NQ A T++N +A + PE L+ +W+ DSGASNH+ +D L+ K +VVVGNG+K+ I +G+ + N LLLKD+L VP
Subjt: DHTNQTSAQPTVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRN-LLLKDILFVP
Query: HMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNG
+ KNL+SVSK+ DN VL+EF+ FC VK+K + +V L G L++ LY+L S F P Q Q F T+ SV D+
Subjt: HMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNG
Query: VLINVIQSILLTCKVDMWHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFL
V + S+L++ ++D+ H+RLGHPS K+LN VL N S N + C+AC++GK+H LPF S++RA VLDL+H+DLWGP PI S + YYI F+
Subjt: VLINVIQSILLTCKVDMWHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFL
Query: DDYSRYTWIFPLKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPIIQFAK
DDYSRYTW++PLK ++DA + F QFKA E Q+ +K+LR D GGEYKP + +
Subjt: DDYSRYTWIFPLKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPIIQFAK
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 1.8e-13 | 24.29 | Show/hide |
Query: CQLCGKMGHTTVICHHRYDKANSNTQDHTN--QTSAQPTVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLS-LKGTTPSLSNVVVGNGT
C CG+ GH C H N+ +++ QT+ + N T++M + + +DSGAS+H+ D + P L V G
Subjt: CQLCGKMGHTTVICHHRYDKANSNTQDHTN--QTSAQPTVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLS-LKGTTPSLSNVVVGNGT
Query: KVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFC
+ G ++ + L+D+LF NL+SV ++ Q+ + +EF +K+ + +NGL
Subjt: KVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFC
Query: GPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCK----VDMWHKRLGHPSPKILNQVLH---ICNASSKNNESLS--FCEACKFGKSHRLPF
VV++ N V + Q+ + K +WH+R GH S L ++ + S NN LS CE C GK RLPF
Subjt: GPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCK----VDMWHKRLGHPSPKILNQVLH---ICNASSKNNESLS--FCEACKFGKSHRLPF
Query: -TLSD-SRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEY
L D + L +VHSD+ GP + Y++ F+D ++ Y + +K ++D FS+F F A++E +N + L D G EY
Subjt: -TLSD-SRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEY
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.7e-29 | 25.04 | Show/hide |
Query: ILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKPLWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRLQAL
+L K+PD +K + W ++ + ++ ++ ++ D A+ +W ++ + ++ + + Y + L + M E + + L
Subjt: ILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKPLWDSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTMKRLQAL
Query: KGNISMNLTSTKLASINVASTEGQKG-GMHTSNPNNYN--------------------------------QNSGFA-SNNSQTRGY--SSNRGNRYRSRG
G I T+LA++ V E K + S P++Y+ +N G A + R Y SSN R +RG
Subjt: KGNISMNLTSTKLASINVASTEGQKG-GMHTSNPNNYN--------------------------------QNSGFA-SNNSQTRGY--SSNRGNRYRSRG
Query: RYSPYTPNNRPICQLCGKMGHTTVIC-HHRYDKANSNTQDHTNQTSA----QPTVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKG
+ + + C C + GH C + R K ++ Q + + T+A V+ + PES W +D+ AS+H AT L +
Subjt: RYSPYTPNNRPICQLCGKMGHTTVIC-HHRYDKANSNTQDHTNQTSA----QPTVIQEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKG
Query: TTPSLSNVVVGNGTKVPIKGVGSTYIKGRKR-NLLLKDILFVPHMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEAL
V +GN + I G+G IK L+LKD+ VP ++ NLIS + +D + F K + + +I K G+ R
Subjt: TTPSLSNVVVGNGTKVPIKGVGSTYIKGRKR-NLLLKDILFVPHMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEAL
Query: VCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDMWHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGK
RT ++ C QG+ +N Q + VD+WHKR+GH S K L + S ++ C+ C FGK
Subjt: VCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDMWHKRLGHPSPKILNQVLHICNASSKNNESLSFCEACKFGK
Query: SHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEY
HR+ F S R +LDLV+SD+ GP I S G Y++ F+DD SR W++ LKT+ F VF +F A E++ LK LR D GGEY
Subjt: SHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEY
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| Q12501 Transposon Ty2-OR2 Gag-Pol polyprotein | 1.8e-05 | 21.16 | Show/hide |
Query: NRLMLQQTRKGTMKMHEYLDTMKRLQALKGNISMNLTSTKLASINVASTEGQKGGMHTSNPNNYNQNSGFASNNSQTRGYSSNRGNRYRSRGRYSPYTPN
+RL Q KG +YL R K N+ + S A I + E + M+ + P+ Y Q+S + N S+T ++N R+ R + P
Subjt: NRLMLQQTRKGTMKMHEYLDTMKRLQALKGNISMNLTSTKLASINVASTEGQKGGMHTSNPNNYNQNSGFASNNSQTRGYSSNRGNRYRSRGRYSPYTPN
Query: NRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVI---------QEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPS
H + ++ + N+ DH N+++ + Q+ S PT + + L D +DSGAS + L T S
Subjt: NRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVI---------QEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPS
Query: LSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQDNPVLVEFHDVFCFVKE--KNSSEVCLIGKLENGLYRLLEEHEALVCL
N+V +PI +G+ + + L P++ +L+S+S++T N CF + + S L +++G + L + +
Subjt: LSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQDNPVLVEFHDVFCFVKE--KNSSEVCLIGKLENGLYRLLEEHEALVCL
Query: SEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDMWHKRLGHPSPKIL------NQVLHICNASSK-NNESLSFCEAC
P ++ + +V + V N L+ H+ LGH + + + N V ++ + + +N S C C
Subjt: SEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCKVDMWHKRLGHPSPKIL------NQVLHICNASSK-NNESLSFCEAC
Query: KFGKS----HRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRAD--AFSVFTQFKAQAEKQYNTVLKTLRCDGGGE
GKS H L + +H+D++GP +Y+I+F D+ +R+ W++PL R + +VFT A + Q+N + ++ D G E
Subjt: KFGKS----HRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPLKTRAD--AFSVFTQFKAQAEKQYNTVLKTLRCDGGGE
Query: Y
Y
Subjt: Y
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 9.9e-49 | 24.73 | Show/hide |
Query: LNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKPLW
+N KL TNYL+W V + Y+L G L T +PP+ D NP+Y W ++L+ + +++ + V A +W
Subjt: LNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKPLW
Query: DSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTM----------------------------KRLQALKGNISMNLTSTKLASIN----------
+++++ + S R L+Q KGT + +Y+ + + + + I+ T L I+
Subjt: DSIQEYFDIQSRSQEDYNRLMLQQTRKGTMKMHEYLDTM----------------------------KRLQALKGNISMNLTSTKLASIN----------
Query: -----------VASTEGQKGGMHTSNPNNYNQNSGF--ASNNSQTRGYSSNRGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDH
A+ + T+N NN N+N+ + +NN+ ++ + + N + + + PY CQ+CG GH+ C S Q
Subjt: -----------VASTEGQKGGMHTSNPNNYNQNSGF--ASNNSQTRGYSSNRGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDH
Query: TNQTSAQPTVIQEP---TSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVP
+ ++Q Q P T P A + +W +DSGA++H+ +DF LSL +V+V +G+ +PI GST + + R L L +IL+VP
Subjt: TNQTSAQPTVIQEP---TSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVP
Query: HMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNG
++ KNLISV ++ N V VEF VK+ N+ L GK ++ LY P+ Q
Subjt: HMKKNLISVSKITQDNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNG
Query: VLINVIQSILLTCKVDMWHKRLGHPSPKILNQVLHICNASSKN-NESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAF
+++ S WH RLGHP+P ILN V+ + S N + C C KS+++PF+ S ++ L+ ++SD+W +PI S Y YY+ F
Subjt: VLINVIQSILLTCKVDMWHKRLGHPSPKILNQVLHICNASSKN-NESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAF
Query: LDDYSRYTWIFPLKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPIIQF
+D ++RYTW++PLK ++ F FK E ++ T + T D GGE+ + ++
Subjt: LDDYSRYTWIFPLKTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEYKPIIQF
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.4e-48 | 25.63 | Show/hide |
Query: LNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKPLW
+N KL TNYL+W V + Y+L G L TP +PP+ D + NP+Y W ++L+ + +++ + V A +W
Subjt: LNQVTSIKLDRTNYLLWQNIVIPILKSYKLEGHLSSKTPAPEMSIILPPSQKEPDGLKMPNPEYDLWLAANQLLVGWLYNSMTPEITTQVMGHDEAKPLW
Query: DSIQEYF----------------------------------DIQSRSQEDYNRLMLQQTRKGT----MKMHEYL-DTMKRLQALKGNISMNLTSTKLASI
+++++ + + +DY ++ Q K T ++HE L + +L AL + +T+ +
Subjt: DSIQEYF----------------------------------DIQSRSQEDYNRLMLQQTRKGT----MKMHEYL-DTMKRLQALKGNISMNLTSTKLASI
Query: NVASTEGQKGGMHTSNPNNYNQNSGFASNNSQTRGYS-SNRGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVI
N + N NN N + +NN+++ + S+ G+R +R + PY CQ+C GH+ C + ++ Q Q S P
Subjt: NVASTEGQKGGMHTSNPNNYNQNSGFASNNSQTRGYS-SNRGNRYRSRGRYSPYTPNNRPICQLCGKMGHTTVICHHRYDKANSNTQDHTNQTSAQPTVI
Query: QEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQ
+P +N PY + +W +DSGA++H+ +DF LS +V++ +G+ +PI GS + R+L L +L+VP++ KNLISV ++
Subjt: QEPTSSNPTALMPYPESLQDPSWYMDSGASNHVATDFGKLSLKGTTPSLSNVVVGNGTKVPIKGVGSTYIKGRKRNLLLKDILFVPHMKKNLISVSKITQ
Query: DNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCK
N V VEF VK+ N+ L GK ++ LY P+ Q +++ S
Subjt: DNPVLVEFHDVFCFVKEKNSSEVCLIGKLENGLYRLLEEHEALVCLSEVKQRTQSQFCGPPPPVQGDQQPFFVTPTVVQSVRRDNGVLINVIQSILLTCK
Query: VDMWHKRLGHPSPKILNQVL--HICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPL
WH RLGHPS ILN V+ H + +++ LS C C KSH++PF+ S +S L+ ++SD+W +PI S Y YY+ F+D ++RYTW++PL
Subjt: VDMWHKRLGHPSPKILNQVL--HICNASSKNNESLSFCEACKFGKSHRLPFTLSDSRASGVLDLVHSDLWGPTPIRSTHGYAYYIAFLDDYSRYTWIFPL
Query: KTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEY
K ++ F FK+ E ++ T + TL D GGE+
Subjt: KTRADAFSVFTQFKAQAEKQYNTVLKTLRCDGGGEY
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