CuGenDBv2

Gene ID	Lag0011825
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	CCHC-type domain-containing protein
Genome location	chr1:33415707..33416809
RNA-Seq Expression	Lag0011825
Synteny	Lag0011825
Gene Ontology terms	GO:0006310 - DNA recombination (biological process) GO:0032196 - transposition (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR006564 - Zinc finger, PMZ-type IPR007527 - Zinc finger, SWIM-type

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0035755.1 uncharacterized protein E6C27_scaffold403G00270 [Cucumis melo var. makuwa]

1.7e-79

49.37

Show/hide

Query:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA
        NLKA  GEH E+VIVSD H  I N   + Y+  EH                                           E ++PS+R ELE VG+ +WARA
Subjt:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA

Query:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI
        FF RKRY +ITTNISESMNSTLK+ RELP+I LLE+ R L+Q WFY+ +T  SFQRT L   AE+M+R SL QSR+M+IY ++Q++FEVH R +QF VNI
Subjt:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI

Query:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK
          +TC+CR+WDLDLIPC HAC+ALS RN     Y+ +FY ++NL+ +Y K  RPIG + Q       G+D ILPP  KR  GRPKKKR  S +E++++ +
Subjt:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK

Query:  CGRCGQVGHNRRSCRNPI
        C RCG+ GHN RSC+ PI
Subjt:  CGRCGQVGHNRRSCRNPI

TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]

3.4e-80

49.69

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Query:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA
        NLKA  GEH E+VIVSD H  I NG    Y+  EH                                           E ++PS+R ELE VG+ +WARA
Subjt:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA

Query:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI
        FF RKRY +ITTNISESM STLK+ RELPVI LLE+ R L+Q WFY+R+T  SFQ T L  +AE+M+R SL QSR+M+IY ++Q++FEVH R +QF VNI
Subjt:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI

Query:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK
          +TC+CR+WDLDLIPC HAC+ALS RN     Y+ +FY ++NL+ +Y K  RPIG + Q       G+D ILPP  KR  GRPKKKR  S +E++++ +
Subjt:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK

Query:  CGRCGQVGHNRRSCRNPI
        C RCG+ GHN RSC+ PI
Subjt:  CGRCGQVGHNRRSCRNPI

TYK22587.1 uncharacterized protein E5676_scaffold195G00040 [Cucumis melo var. makuwa]

2.1e-77

48.11

Show/hide

Query:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA
        NLKA  GEH E++IVSD +  I NG    Y+  EH                                           E ++PS+R ELE VG+ +WARA
Subjt:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA

Query:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI
        FF RKRY +ITTNISESMNSTLK+ RELPVI LLE+ R L+Q WFY+R+   SFQRT L  +AE+++R SL QS +M+IY ++Q++FEVH R +QF VNI
Subjt:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI

Query:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK
          +TC+CR+WDLDLIPC HAC ALS RN     Y+ +FY ++NL+ +Y K  R IG + Q       G+D ILPP  KR  GRPKKKR  S +E++++ +
Subjt:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK

Query:  CGRCGQVGHNRRSCRNPI
        C RCG+ GHN +SC+ PI
Subjt:  CGRCGQVGHNRRSCRNPI

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]

9.9e-80

49.69

Show/hide

Query:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA
        NLKA  GEH E+VIVSD H  I NG    Y+  EH                                           E ++PS+R ELE VG+ +WARA
Subjt:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA

Query:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI
        FF RKRY +ITTNISESMNSTLK+ RELPVI LLE+ R L+Q WFY+R+T  SFQRT L  +AE+M+R SL QSR+M+IY ++Q++FEVH R +QF VNI
Subjt:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI

Query:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK
          +TC+CR+WDLDLIPC HAC+ALS RN     Y+ +FY ++NL+ +Y K  RPIG + Q       G+D ILPP  KR  GR +KKR  S +E+++  +
Subjt:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK

Query:  CGRCGQVGHNRRSCRNPI
        C RCG+ GHN RSC+ PI
Subjt:  CGRCGQVGHNRRSCRNPI

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]

2.1e-77

48.11

Show/hide

Query:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA
        NLKA  GEH E++IVSD +  I NG    Y+  EH                                           E ++PS+R ELE VG+ +WARA
Subjt:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA

Query:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI
        FF RKRY +ITTNISESMNSTLK+ RELPVI LLE+ R L+Q WFY+R+   SFQRT L  +AE+++R SL QS +M+IY ++Q++FEVH R +QF VNI
Subjt:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI

Query:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK
          +TC+CR+WDLDLIPC HAC ALS RN     Y+ +FY ++NL+ +Y K  R IG + Q       G+D ILPP  KR  GRPKKKR  S +E++++ +
Subjt:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK

Query:  CGRCGQVGHNRRSCRNPI
        C RCG+ GHN +SC+ PI
Subjt:  CGRCGQVGHNRRSCRNPI

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SJA0 Uncharacterized protein

1.0e-77

48.11

Show/hide

Query:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA
        NLKA  GEH E++IVSD +  I NG    Y+  EH                                           E ++PS+R ELE VG+ +WARA
Subjt:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA

Query:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI
        FF RKRY +ITTNISESMNSTLK+ RELPVI LLE+ R L+Q WFY+R+   SFQRT L  +AE+++R SL QS +M+IY ++Q++FEVH R +QF VNI
Subjt:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI

Query:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK
          +TC+CR+WDLDLIPC HAC ALS RN     Y+ +FY ++NL+ +Y K  R IG + Q       G+D ILPP  KR  GRPKKKR  S +E++++ +
Subjt:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK

Query:  CGRCGQVGHNRRSCRNPI
        C RCG+ GHN +SC+ PI
Subjt:  CGRCGQVGHNRRSCRNPI

A0A5A7T2S1 Uncharacterized protein

8.2e-80

49.37

Show/hide

Query:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA
        NLKA  GEH E+VIVSD H  I N   + Y+  EH                                           E ++PS+R ELE VG+ +WARA
Subjt:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA

Query:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI
        FF RKRY +ITTNISESMNSTLK+ RELP+I LLE+ R L+Q WFY+ +T  SFQRT L   AE+M+R SL QSR+M+IY ++Q++FEVH R +QF VNI
Subjt:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI

Query:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK
          +TC+CR+WDLDLIPC HAC+ALS RN     Y+ +FY ++NL+ +Y K  RPIG + Q       G+D ILPP  KR  GRPKKKR  S +E++++ +
Subjt:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK

Query:  CGRCGQVGHNRRSCRNPI
        C RCG+ GHN RSC+ PI
Subjt:  CGRCGQVGHNRRSCRNPI

A0A5D3CDB8 Uncharacterized protein

1.7e-80

49.69

Show/hide

Query:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA
        NLKA  GEH E+VIVSD H  I NG    Y+  EH                                           E ++PS+R ELE VG+ +WARA
Subjt:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA

Query:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI
        FF RKRY +ITTNISESM STLK+ RELPVI LLE+ R L+Q WFY+R+T  SFQ T L  +AE+M+R SL QSR+M+IY ++Q++FEVH R +QF VNI
Subjt:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI

Query:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK
          +TC+CR+WDLDLIPC HAC+ALS RN     Y+ +FY ++NL+ +Y K  RPIG + Q       G+D ILPP  KR  GRPKKKR  S +E++++ +
Subjt:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK

Query:  CGRCGQVGHNRRSCRNPI
        C RCG+ GHN RSC+ PI
Subjt:  CGRCGQVGHNRRSCRNPI

A0A5D3DFW1 Uncharacterized protein

1.0e-77

48.11

Show/hide

Query:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA
        NLKA  GEH E++IVSD +  I NG    Y+  EH                                           E ++PS+R ELE VG+ +WARA
Subjt:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA

Query:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI
        FF RKRY +ITTNISESMNSTLK+ RELPVI LLE+ R L+Q WFY+R+   SFQRT L  +AE+++R SL QS +M+IY ++Q++FEVH R +QF VNI
Subjt:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI

Query:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK
          +TC+CR+WDLDLIPC HAC ALS RN     Y+ +FY ++NL+ +Y K  R IG + Q       G+D ILPP  KR  GRPKKKR  S +E++++ +
Subjt:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK

Query:  CGRCGQVGHNRRSCRNPI
        C RCG+ GHN +SC+ PI
Subjt:  CGRCGQVGHNRRSCRNPI

A0A5D3E198 MuDRA-like transposase

4.8e-80

49.69

Show/hide

Query:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA
        NLKA  GEH E+VIVSD H  I NG    Y+  EH                                           E ++PS+R ELE VG+ +WARA
Subjt:  NLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEH-------------------------------------------EDIAPSIRTELEEVGKARWARA

Query:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI
        FF RKRY +ITTNISESMNSTLK+ RELPVI LLE+ R L+Q WFY+R+T  SFQRT L  +AE+M+R SL QSR+M+IY ++Q++FEVH R +QF VNI
Subjt:  FFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQTWFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNI

Query:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK
          +TC+CR+WDLDLIPC HAC+ALS RN     Y+ +FY ++NL+ +Y K  RPIG + Q       G+D ILPP  KR  GR +KKR  S +E+++  +
Subjt:  FAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIYSKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKK

Query:  CGRCGQVGHNRRSCRNPI
        C RCG+ GHN RSC+ PI
Subjt:  CGRCGQVGHNRRSCRNPI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCTCGCTATCAGTAACTTGAAAGCTGCGTTAGGTGAGCATAAGGAGTTAGTTATCGTATCGGATGGGCACCTTATCATACCAAACGGCGTTAGGAATAGCTAT
GATTCTGTGGAGCATGAAGACATAGCACCATCAATTAGGACAGAGTTAGAGGAGGTAGGTAAAGCTAGGTGGGCAAGAGCGTTTTTTGCAAGGAAGAGGTATTCA
CTAATCACAACCAACATATCTGAGAGCATGAATTCAACCTTGAAGGATGCACGTGAACTCCCTGTTATCCATCTTCTTGAAGCTGCACGCAAACTTATGCAAACA
TGGTTCTATGATCGTCAGACCTTTTCAAGTTTTCAACGCACAGATTTATGTCCTTGGGCAGAAAACATGCTTCGATCGTCACTCTTACAAAGTCGTACAATGGAT
ATATACAATATCAATCAATATCAGTTCGAAGTGCATGATCGGACAAAGCAATTTGAGGTTAACATCTTTGCTCAGACATGCACTTGCAGGCGGTGGGACTTGGAT
CTAATACCTTGTCCACATGCATGTCTTGCATTATCTCGGAGGAATCAAGAATTTCGAGCATATTCACATGAGTTTTATCGTCTAACAAATTTAGTCCAGATATAT
AGCAAAGACATACGTCCGATAGGCAACATTGCACAATTCTCTGGCTACCAAGTTGTTGGTGACGACCCCATACTCCCGCCTAGCACTAAGCGTTCGGTTGGCAGA
CCCAAAAAAAAGAGGATCCCATCTTGCATAGAAAGGAGGTCGGCTAAAAAGTGTGGACGATGCGGACAGGTTGGGCACAACCGCAGATCCTGTAGGAACCCCATA
TCTCATTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MLAISNLKAALGEHKELVIVSDGHLIIPNGVRNSYDSVEHEDIAPSIRTELEEVGKARWARAFFARKRYSLITTNISESMNSTLKDARELPVIHLLEAARKLMQT
WFYDRQTFSSFQRTDLCPWAENMLRSSLLQSRTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLDLIPCPHACLALSRRNQEFRAYSHEFYRLTNLVQIY
SKDIRPIGNIAQFSGYQVVGDDPILPPSTKRSVGRPKKKRIPSCIERRSAKKCGRCGQVGHNRRSCRNPISH

Lag0011825 (gene) of Sponge gourd (AG-4) v1 genome