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Lag0011831 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011831
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGirdin-like
Genome locationchr1:33509100..33510201
RNA-Seq ExpressionLag0011831
SyntenyLag0011831
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031738551.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]3.4e-0526.23Show/hide
Query:  KTSIWVTLVEFLV-GLGIVWGSVSKQEQLEKEIAALDIETRDLNKRKHILKRDNEVSQATLKSRNDQLLKQQYETSSLHELIKEPEECISPRNQKITKVE
        +TS W+    FL   L      +  Q++LEK +  LD E R +NK    LK +  + QAT++S+++ +   +       EL+ + +  I  R  +I  +E
Subjt:  KTSIWVTLVEFLV-GLGIVWGSVSKQEQLEKEIAALDIETRDLNKRKHILKRDNEVSQATLKSRNDQLLKQQYETSSLHELIKEPEECISPRNQKITKVE

Query:  EKNGMLCRLVDDLQLTFKIREEQLEELINDNKRVREFNQSLNIHLSKYHDATDRLMKDYTYLKEQYDRLIDDFIFVRQNHVTL
          N  L + VD L +       ++ E   D K ++ +  SL+  L+ + ++++R++++Y  LK  Y ++  D+   R++  TL
Subjt:  EKNGMLCRLVDDLQLTFKIREEQLEELINDNKRVREFNQSLNIHLSKYHDATDRLMKDYTYLKEQYDRLIDDFIFVRQNHVTL

TrEMBL top hitse value%identityAlignment
A0A5D3DJ95 Girdin-like6.9e-0427.17Show/hide
Query:  KTSIWVTLVEFLVG-LGIVWGSVSKQEQLEKEIAALDIETRDLNKRKHILKRDNEVSQATLKSRNDQLLKQQYETSSLHELIKEPEECISPRNQKITKVE
        +TS W+    +L   L      +  Q++LEK+I  LD E R +NK    LK +    QAT+ S+++ +   +       EL+ +    I  R  +I  +E
Subjt:  KTSIWVTLVEFLVG-LGIVWGSVSKQEQLEKEIAALDIETRDLNKRKHILKRDNEVSQATLKSRNDQLLKQQYETSSLHELIKEPEECISPRNQKITKVE

Query:  EKNGMLCRLVDDLQLTFKIREEQLEELINDNKRVREFNQSLNIHLSKYHDATDRLMKDYTYLKEQYDRLIDDF
         +N  L + VD L L    R E+ E L N       +  SL+  L+   +++ R+ ++Y  L   Y ++  D+
Subjt:  EKNGMLCRLVDDLQLTFKIREEQLEELINDNKRVREFNQSLNIHLSKYHDATDRLMKDYTYLKEQYDRLIDDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTCCCCATTTCCACCACATATTCGAAGACCTCCATTTGGGTGACACTTGTTGAGTTTTTGGTGGGATTGGGTATTGTGTGGGGTAGTGTCAGCAAACAA
GAACAATTAGAAAAAGAAATTGCTGCGCTAGACATAGAGACTCGTGACCTGAACAAAAGAAAGCATATATTGAAAAGAGATAATGAAGTCTCCCAAGCAACTCTC
AAGTCACGAAATGACCAACTTTTGAAGCAACAATATGAGACTTCCTCACTCCATGAGTTGATAAAAGAGCCTGAAGAATGCATTAGTCCAAGGAACCAAAAGATT
ACTAAGGTAGAAGAAAAGAATGGAATGCTATGTCGATTAGTTGATGACTTGCAGTTAACATTCAAGATTAGAGAGGAACAATTAGAGGAGCTCATCAATGACAAC
AAGAGAGTGAGAGAATTCAATCAGTCACTCAATATCCACCTTAGTAAGTATCATGATGCTACTGACAGATTAATGAAGGACTATACCTATCTAAAGGAGCAGTAT
GATAGATTAATTGATGATTTCATATTTGTGAGGCAAAACCACGTGACGCTGCGTAGTAAAACGAAACATATGCTCACCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTCCCCATTTCCACCACATATTCGAAGACCTCCATTTGGGTGACACTTGTTGAGTTTTTGGTGGGATTGGGTATTGTGTGGGGTAGTGTCAGCAAACAA
GAACAATTAGAAAAAGAAATTGCTGCGCTAGACATAGAGACTCGTGACCTGAACAAAAGAAAGCATATATTGAAAAGAGATAATGAAGTCTCCCAAGCAACTCTC
AAGTCACGAAATGACCAACTTTTGAAGCAACAATATGAGACTTCCTCACTCCATGAGTTGATAAAAGAGCCTGAAGAATGCATTAGTCCAAGGAACCAAAAGATT
ACTAAGGTAGAAGAAAAGAATGGAATGCTATGTCGATTAGTTGATGACTTGCAGTTAACATTCAAGATTAGAGAGGAACAATTAGAGGAGCTCATCAATGACAAC
AAGAGAGTGAGAGAATTCAATCAGTCACTCAATATCCACCTTAGTAAGTATCATGATGCTACTGACAGATTAATGAAGGACTATACCTATCTAAAGGAGCAGTAT
GATAGATTAATTGATGATTTCATATTTGTGAGGCAAAACCACGTGACGCTGCGTAGTAAAACGAAACATATGCTCACCGATTAA
Protein sequenceShow/hide protein sequence
MGVPISTTYSKTSIWVTLVEFLVGLGIVWGSVSKQEQLEKEIAALDIETRDLNKRKHILKRDNEVSQATLKSRNDQLLKQQYETSSLHELIKEPEECISPRNQKI
TKVEEKNGMLCRLVDDLQLTFKIREEQLEELINDNKRVREFNQSLNIHLSKYHDATDRLMKDYTYLKEQYDRLIDDFIFVRQNHVTLRSKTKHMLTD