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Lag0011849 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011849
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr1:33767838..33768470
RNA-Seq ExpressionLag0011849
SyntenyLag0011849
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]2.0e-4859.49Show/hide
Query:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL
        +EF++ E T +  PHNDALV+TL +AN K+HRIL+DGGSSTD+ SLTA+KAM L  E+LKSSLTPL+GFGGER+ P G IEL +TF     ++T++++FL
Subjt:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL

Query:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK
        VVD   +YN IL RPT+H ++AI STYHQ +KFPT  GV  +KGEQ+ SRECY+T+++
Subjt:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]5.7e-4861.64Show/hide
Query:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL
        +EF++ E T +  PHNDALV+TL +ANVK+HRIL+DGGSS D++S TA+KAM L  ++LKSS  PLVGFGGERV   G IEL VTFG G  +VTK+++FL
Subjt:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL

Query:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLKE
        VV+   +YNAILGRPT+H +KAI STYHQ  KFPT  GV  +KGEQ+ SRECY T++++
Subjt:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLKE

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]1.4e-4660.13Show/hide
Query:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL
        +EF++ E T +   HNDALV+TL +ANVK+HRIL+DGGSS D++S TA+KAM LE ++LKSS  PLVGFGGERV   G IEL VTFG G   VTK+++FL
Subjt:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL

Query:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK
        VV+   +YN ILGR T+H +K I STYHQ +KFPT  GV  +KGEQ+ SRECY+T+++
Subjt:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]1.7e-4760.76Show/hide
Query:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL
        ++F++ ETT +  PHNDALV+TL + N K+HRIL+DGGSST ++SLTA+KAM L  + LKS+L PLVGFGGERV     I+L VTFG+G   +TKI+ FL
Subjt:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL

Query:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK
        VVD   +YNAILGRPT+H +KAI STYH+ LKFPT  G+  VKGEQ+ S ECY+T+L+
Subjt:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]2.8e-4760.13Show/hide
Query:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL
        +EF++ E T +  PHNDALV+TL +ANVK+HRIL+DGGSS D++S T +K M L  ++LKSS  PL+GFG ERV P G IEL VTFG G  +VTK+++FL
Subjt:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL

Query:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK
        VVD   +YNAILGR T+H +KAI STYHQ +KFPT  GV  +KGEQ+ SRECY+T+++
Subjt:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159019.5e-4959.49Show/hide
Query:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL
        +EF++ E T +  PHNDALV+TL +AN K+HRIL+DGGSSTD+ SLTA+KAM L  E+LKSSLTPL+GFGGER+ P G IEL +TF     ++T++++FL
Subjt:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL

Query:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK
        VVD   +YN IL RPT+H ++AI STYHQ +KFPT  GV  +KGEQ+ SRECY+T+++
Subjt:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK

A0A6J1DQY2 uncharacterized protein LOC1110223212.8e-4861.64Show/hide
Query:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL
        +EF++ E T +  PHNDALV+TL +ANVK+HRIL+DGGSS D++S TA+KAM L  ++LKSS  PLVGFGGERV   G IEL VTFG G  +VTK+++FL
Subjt:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL

Query:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLKE
        VV+   +YNAILGRPT+H +KAI STYHQ  KFPT  GV  +KGEQ+ SRECY T++++
Subjt:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLKE

A0A6J1DRG9 uncharacterized protein LOC1110235876.8e-4760.13Show/hide
Query:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL
        +EF++ E T +   HNDALV+TL +ANVK+HRIL+DGGSS D++S TA+KAM LE ++LKSS  PLVGFGGERV   G IEL VTFG G   VTK+++FL
Subjt:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL

Query:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK
        VV+   +YN ILGR T+H +K I STYHQ +KFPT  GV  +KGEQ+ SRECY+T+++
Subjt:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK

A0A6J1DV51 uncharacterized protein LOC1110246628.0e-4860.76Show/hide
Query:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL
        ++F++ ETT +  PHNDALV+TL + N K+HRIL+DGGSST ++SLTA+KAM L  + LKS+L PLVGFGGERV     I+L VTFG+G   +TKI+ FL
Subjt:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL

Query:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK
        VVD   +YNAILGRPT+H +KAI STYH+ LKFPT  G+  VKGEQ+ S ECY+T+L+
Subjt:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK

A0A6J1DXV4 uncharacterized protein LOC1110251471.4e-4760.13Show/hide
Query:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL
        +EF++ E T +  PHNDALV+TL +ANVK+HRIL+DGGSS D++S T +K M L  ++LKSS  PL+GFG ERV P G IEL VTFG G  +VTK+++FL
Subjt:  LEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGRITVTKIINFL

Query:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK
        VVD   +YNAILGR T+H +KAI STYHQ +KFPT  GV  +KGEQ+ SRECY+T+++
Subjt:  VVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGGACCAGAATATCAAGGTATGTACTCTGTCCATCTAGCCAAGGAACACCCCCTTTGGAGTTCACCAAGGCTGAGACAACAAGCATTCATCAGCCACATAATGA
TGCTCTGGTGGTCACTTTAATGGTAGCTAATGTGAAAATCCATCGGATTCTAATTGATGGAGGAAGTTCGACTGATGTCCTTTCTCTAACAGCCTTTAAGGCAATGCAGT
TAGAGAGAGAACTCTTAAAGTCAAGCCTTACCCCACTTGTAGGGTTTGGAGGAGAAAGAGTGACCCCAAATGGTAGCATAGAACTTCTTGTAACATTTGGGGATGGACGG
ATTACAGTGACGAAGATAATAAACTTCCTAGTTGTGGATTGCATTTTAGCCTATAATGCAATCCTAGGAAGGCCGACCTTGCATGAAATGAAGGCCATAGCTTCGACTTA
TCATCAGTTGCTGAAGTTTCCAACTCAAAATGGTGTAGAAGTTGTCAAAGGAGAGCAGAAGGCATCAAGAGAATGTTACTGGACAACGCTGAAAGAAGTTAAACTGCTGA
GGGCTGAGGTCTACCAGAGGATGAGCCGAAGCCGAGCAGGGCACACTTCCACCAACACCGAATCTGAACTTATGGAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTGGACCAGAATATCAAGGTATGTACTCTGTCCATCTAGCCAAGGAACACCCCCTTTGGAGTTCACCAAGGCTGAGACAACAAGCATTCATCAGCCACATAATGA
TGCTCTGGTGGTCACTTTAATGGTAGCTAATGTGAAAATCCATCGGATTCTAATTGATGGAGGAAGTTCGACTGATGTCCTTTCTCTAACAGCCTTTAAGGCAATGCAGT
TAGAGAGAGAACTCTTAAAGTCAAGCCTTACCCCACTTGTAGGGTTTGGAGGAGAAAGAGTGACCCCAAATGGTAGCATAGAACTTCTTGTAACATTTGGGGATGGACGG
ATTACAGTGACGAAGATAATAAACTTCCTAGTTGTGGATTGCATTTTAGCCTATAATGCAATCCTAGGAAGGCCGACCTTGCATGAAATGAAGGCCATAGCTTCGACTTA
TCATCAGTTGCTGAAGTTTCCAACTCAAAATGGTGTAGAAGTTGTCAAAGGAGAGCAGAAGGCATCAAGAGAATGTTACTGGACAACGCTGAAAGAAGTTAAACTGCTGA
GGGCTGAGGTCTACCAGAGGATGAGCCGAAGCCGAGCAGGGCACACTTCCACCAACACCGAATCTGAACTTATGGAGTTTTAG
Protein sequenceShow/hide protein sequence
MVWTRISRYVLCPSSQGTPPLEFTKAETTSIHQPHNDALVVTLMVANVKIHRILIDGGSSTDVLSLTAFKAMQLERELLKSSLTPLVGFGGERVTPNGSIELLVTFGDGR
ITVTKIINFLVVDCILAYNAILGRPTLHEMKAIASTYHQLLKFPTQNGVEVVKGEQKASRECYWTTLKEVKLLRAEVYQRMSRSRAGHTSTNTESELMEF