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Lag0011853 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011853
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionAnkyrin repeat protein
Genome locationchr1:33842832..33843312
RNA-Seq ExpressionLag0011853
SyntenyLag0011853
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048674.1 Ankyrin repeat protein [Cucumis melo var. makuwa]5.5e-1441.18Show/hide
Query:  MTMTRGFKLFHTVFLVFAWQ-CCAKVTATFNDVTDM----------------------------------QSPAEAP-GIAPVGLETPMSKDNKALSFSL
        M MTRGFKLF T+ LVFAW+ CCA+V ATF D T +                                  Q  AEAP GIAPVGL+T ++K+ KA S+ L
Subjt:  MTMTRGFKLFHTVFLVFAWQ-CCAKVTATFNDVTDM----------------------------------QSPAEAP-GIAPVGLETPMSKDNKALSFSL

Query:  EIKKGLTTSLGLEIPKSKGDVVVSHGHEIRKKSGVNIDISNGGKVSLKSSGSV
        +I           I + KG   +S+ HE    +G NI  S+GGKVS+KS GSV
Subjt:  EIKKGLTTSLGLEIPKSKGDVVVSHGHEIRKKSGVNIDISNGGKVSLKSSGSV

KAE8646352.1 hypothetical protein Csa_015951, partial [Cucumis sativus]3.2e-1441.83Show/hide
Query:  MTMTRGFKLFHTVFLVFAWQ-CCAKVTATFNDVT----------------------------------DMQSPAEAP-GIAPVGLETPMSKDNKALSFSL
        M M RGF LF T+ LVFAW+ CCA+V ATF+D T                                  + Q  AEAP GIAPVGLET ++K++K  S+ L
Subjt:  MTMTRGFKLFHTVFLVFAWQ-CCAKVTATFNDVT----------------------------------DMQSPAEAP-GIAPVGLETPMSKDNKALSFSL

Query:  EIKKGLTTSLGLEIPKSKGDVVVSHGHEIRKKSGVNIDISNGGKVSLKSSGSV
        +I K +            G  VVSH HE    SG NI  S+GGKVS+KS GSV
Subjt:  EIKKGLTTSLGLEIPKSKGDVVVSHGHEIRKKSGVNIDISNGGKVSLKSSGSV

XP_022960412.1 uncharacterized protein LOC111461146 [Cucurbita moschata]1.2e-1141.79Show/hide
Query:  MTMTRGFKLFHTVFLVFAWQCCAKVTATFNDVTDMQSPAEAP------------GIAP---VGLETP-MSKDNKALSFSLEIKKGLTTSLGLEIPKSKGD
        M   RGF + H +FLV AW+CCA++ ATFNDVT +                   GI+      +++P +S D+KA SF  EIKK     +G E+PK  G 
Subjt:  MTMTRGFKLFHTVFLVFAWQCCAKVTATFNDVTDMQSPAEAP------------GIAP---VGLETP-MSKDNKALSFSLEIKKGLTTSLGLEIPKSKGD

Query:  VVVSHGHEIRKKSGVNIDISNGGK---VSLKSSG
           S GHEI +K G NI  S GGK   V LK SG
Subjt:  VVVSHGHEIRKKSGVNIDISNGGK---VSLKSSG

XP_023004881.1 uncharacterized protein LOC111498059 [Cucurbita maxima]1.4e-1241.48Show/hide
Query:  MTMTRGFKLFHTVFLVFAWQCCAKVTATFNDVTDM-------QSPAEAPGIAPVGL---------ETPMSKDNKALSFSLEIKKGLTTSLGLEIPKSKGD
        M   RGF + H +FLV AW+CCA++ ATFNDVT +       +    + G   +G+          + +S D+KA SF  EIKKG    +G E+PK  G 
Subjt:  MTMTRGFKLFHTVFLVFAWQCCAKVTATFNDVTDM-------QSPAEAPGIAPVGL---------ETPMSKDNKALSFSLEIKKGLTTSLGLEIPKSKGD

Query:  VVVSHGHEIRKKSGVNIDISNGGK---VSLKSSGS
           S GHEI +K G NI  S GGK   V LK SG+
Subjt:  VVVSHGHEIRKKSGVNIDISNGGK---VSLKSSGS

XP_023514551.1 uncharacterized protein LOC111778808 [Cucurbita pepo subsp. pepo]6.8e-1240.74Show/hide
Query:  MTMTRGFKLFHTVFLVFAWQCCAKVTATFNDVTDMQSPAEAP------------GIAP---VGLETP-MSKDNKALSFSLEIKKGLTTSLGLEIPKSKGD
        M   RGF + H +FLV AW+CCA++ ATFNDVT +   +               GI+      +++P +S D+KA SF  EIKKG    +G E+P   G 
Subjt:  MTMTRGFKLFHTVFLVFAWQCCAKVTATFNDVTDMQSPAEAP------------GIAP---VGLETP-MSKDNKALSFSLEIKKGLTTSLGLEIPKSKGD

Query:  VVVSHGHEIRKKSGVNIDISNGGKV---SLKSSGS
           S GHEI +K G NI  S GGK+    LK SG+
Subjt:  VVVSHGHEIRKKSGVNIDISNGGKV---SLKSSGS

TrEMBL top hitse value%identityAlignment
A0A0A0K5J0 Uncharacterized protein6.8e-1844.08Show/hide
Query:  MTRGFKLFHTVFLVFAWQCCAKVTATFNDVT--------------------------------DMQSPAEAP-GIAPVGLETPMSKDNKALSFSLEIKKG
        M RGFKLF T+FLVFAWQ C KV ATFNDVT                                 + + AEAP GIAPVGL+TP++K +K  +F LEI   
Subjt:  MTRGFKLFHTVFLVFAWQCCAKVTATFNDVT--------------------------------DMQSPAEAP-GIAPVGLETPMSKDNKALSFSLEIKKG

Query:  LTTSLGLEIPKSKGDVVVSHGHEIRKKSGVNIDISNGGKVSLKSSGSVVVQM
                I + +  VVVS  HEI  KSG NI +S+GGK+SLK  G V V +
Subjt:  LTTSLGLEIPKSKGDVVVSHGHEIRKKSGVNIDISNGGKVSLKSSGSVVVQM

A0A0A0K7W7 Uncharacterized protein4.1e-1542.48Show/hide
Query:  MTMTRGFKLFHTVFLVFAWQ-CCAKVTATFNDVTDM----------------------------------QSPAEAP-GIAPVGLETPMSKDNKALSFSL
        M M RGFKLF T+ LVFAW+ CCA+V ATF+D T +                                  Q  AEAP GIAPVGLET ++K++K  S+ L
Subjt:  MTMTRGFKLFHTVFLVFAWQ-CCAKVTATFNDVTDM----------------------------------QSPAEAP-GIAPVGLETPMSKDNKALSFSL

Query:  EIKKGLTTSLGLEIPKSKGDVVVSHGHEIRKKSGVNIDISNGGKVSLKSSGSV
        +I K +            G  VVSH HE    SG NI  S+GGKVS+KS GSV
Subjt:  EIKKGLTTSLGLEIPKSKGDVVVSHGHEIRKKSGVNIDISNGGKVSLKSSGSV

A0A5A7U057 Ankyrin repeat protein2.7e-1441.18Show/hide
Query:  MTMTRGFKLFHTVFLVFAWQ-CCAKVTATFNDVTDM----------------------------------QSPAEAP-GIAPVGLETPMSKDNKALSFSL
        M MTRGFKLF T+ LVFAW+ CCA+V ATF D T +                                  Q  AEAP GIAPVGL+T ++K+ KA S+ L
Subjt:  MTMTRGFKLFHTVFLVFAWQ-CCAKVTATFNDVTDM----------------------------------QSPAEAP-GIAPVGLETPMSKDNKALSFSL

Query:  EIKKGLTTSLGLEIPKSKGDVVVSHGHEIRKKSGVNIDISNGGKVSLKSSGSV
        +I           I + KG   +S+ HE    +G NI  S+GGKVS+KS GSV
Subjt:  EIKKGLTTSLGLEIPKSKGDVVVSHGHEIRKKSGVNIDISNGGKVSLKSSGSV

A0A6J1H7C9 uncharacterized protein LOC1114611465.6e-1241.79Show/hide
Query:  MTMTRGFKLFHTVFLVFAWQCCAKVTATFNDVTDMQSPAEAP------------GIAP---VGLETP-MSKDNKALSFSLEIKKGLTTSLGLEIPKSKGD
        M   RGF + H +FLV AW+CCA++ ATFNDVT +                   GI+      +++P +S D+KA SF  EIKK     +G E+PK  G 
Subjt:  MTMTRGFKLFHTVFLVFAWQCCAKVTATFNDVTDMQSPAEAP------------GIAP---VGLETP-MSKDNKALSFSLEIKKGLTTSLGLEIPKSKGD

Query:  VVVSHGHEIRKKSGVNIDISNGGK---VSLKSSG
           S GHEI +K G NI  S GGK   V LK SG
Subjt:  VVVSHGHEIRKKSGVNIDISNGGK---VSLKSSG

A0A6J1KTD2 uncharacterized protein LOC1114980596.6e-1341.48Show/hide
Query:  MTMTRGFKLFHTVFLVFAWQCCAKVTATFNDVTDM-------QSPAEAPGIAPVGL---------ETPMSKDNKALSFSLEIKKGLTTSLGLEIPKSKGD
        M   RGF + H +FLV AW+CCA++ ATFNDVT +       +    + G   +G+          + +S D+KA SF  EIKKG    +G E+PK  G 
Subjt:  MTMTRGFKLFHTVFLVFAWQCCAKVTATFNDVTDM-------QSPAEAPGIAPVGL---------ETPMSKDNKALSFSLEIKKGLTTSLGLEIPKSKGD

Query:  VVVSHGHEIRKKSGVNIDISNGGK---VSLKSSGS
           S GHEI +K G NI  S GGK   V LK SG+
Subjt:  VVVSHGHEIRKKSGVNIDISNGGK---VSLKSSGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATGACAAGAGGTTTTAAGCTCTTTCACACTGTTTTCTTAGTGTTTGCTTGGCAGTGTTGTGCAAAGGTAACTGCCACTTTCAACGATGTCACTGACATG
CAGAGTCCTGCAGAAGCACCGGGGATTGCCCCTGTTGGGCTTGAAACTCCAATGAGCAAAGACAATAAAGCTTTGTCTTTTAGTCTTGAAATTAAGAAGGGTCTC
ACTACATCCCTTGGTCTCGAAATTCCCAAGAGCAAGGGCGACGTTGTTGTTTCTCATGGTCACGAAATAAGGAAGAAGAGTGGCGTCAACATTGATATTTCCAAT
GGTGGAAAAGTTAGTTTGAAGAGCAGCGGTAGTGTTGTTGTTCAAATGCTGGCAAGCCTGGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAATGACAAGAGGTTTTAAGCTCTTTCACACTGTTTTCTTAGTGTTTGCTTGGCAGTGTTGTGCAAAGGTAACTGCCACTTTCAACGATGTCACTGACATG
CAGAGTCCTGCAGAAGCACCGGGGATTGCCCCTGTTGGGCTTGAAACTCCAATGAGCAAAGACAATAAAGCTTTGTCTTTTAGTCTTGAAATTAAGAAGGGTCTC
ACTACATCCCTTGGTCTCGAAATTCCCAAGAGCAAGGGCGACGTTGTTGTTTCTCATGGTCACGAAATAAGGAAGAAGAGTGGCGTCAACATTGATATTTCCAAT
GGTGGAAAAGTTAGTTTGAAGAGCAGCGGTAGTGTTGTTGTTCAAATGCTGGCAAGCCTGGTCTGA
Protein sequenceShow/hide protein sequence
MTMTRGFKLFHTVFLVFAWQCCAKVTATFNDVTDMQSPAEAPGIAPVGLETPMSKDNKALSFSLEIKKGLTTSLGLEIPKSKGDVVVSHGHEIRKKSGVNIDISN
GGKVSLKSSGSVVVQMLASLV