; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011875 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011875
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:34121802..34122218
RNA-Seq ExpressionLag0011875
SyntenyLag0011875
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015382226.1 uncharacterized protein LOC107175329, partial [Citrus sinensis]6.9e-1036.36Show/hide
Query:  RQYRHRRFEMSWTNYEECKEIVQRVWHDR-RWNNDIPL---ISKTKECLKRLGQWSVSNYGGSIKR--AIARKEVEIQNLSCSNPQNTIRLVKAEQELEK
        R  R   +E  W+ YE+C+EIV++ W  + RWN + P+     K +E L  L  WS   +GG  K+   +  K   I++ S S+      L K E +++ 
Subjt:  RQYRHRRFEMSWTNYEECKEIVQRVWHDR-RWNNDIPL---ISKTKECLKRLGQWSVSNYGGSIKR--AIARKEVEIQNLSCSNPQNTIRLVKAEQELEK

Query:  LLEDEEIYWKQRARENWLQWG
        +L+DEEI+WKQR+R +WL+ G
Subjt:  LLEDEEIYWKQRARENWLQWG

XP_018827876.1 uncharacterized protein LOC108996436 [Juglans regia]4.1e-1036.36Show/hide
Query:  DGSNNARQYRHRRFEMSWTNYEECKEIVQRVWHDRRW--NNDIPL-ISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSNP---QNTIRLVKA
        +G N  R  R  R+E SW   E+C ++V+  W  R W  +N + L I   K C + L  WS ++ GGS  + + +K  ++  L  ++    Q TI+ VK 
Subjt:  DGSNNARQYRHRRFEMSWTNYEECKEIVQRVWHDRRW--NNDIPL-ISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSNP---QNTIRLVKA

Query:  EQELEKLLEDEEIYWKQRARENWLQWGTEILS
         +E+++LL++++I+WKQRA++ WLQ G EIL+
Subjt:  EQELEKLLEDEEIYWKQRARENWLQWGTEILS

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]4.3e-1243.69Show/hide
Query:  RHRRFEMSWTNYEECKEIVQRVWHDRRWNNDIPLISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSNPQN-TIRLVKAEQELEKLLEDEEIY
        R  RFE  W +++ECKEIV+RVW  +          K   CL+ L +W+V   GGS++ AI RKEVEIQ +           L +A+++LEKLLE+EE Y
Subjt:  RHRRFEMSWTNYEECKEIVQRVWHDRRWNNDIPLISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSNPQN-TIRLVKAEQELEKLLEDEEIY

Query:  WKQ
        W+Q
Subjt:  WKQ

XP_025703912.1 uncharacterized protein LOC112805796 [Arachis hypogaea]7.4e-1238.89Show/hide
Query:  NARQYRHRRFEMSWTNYEECKEIVQRVWHDRR----WNNDIPLISKTKECLKRLGQWSVSNYGGSIKRA---IARKEVEIQNLSCS--NPQNTIRLVKAE
        N R  R  R+E  W + EECKE++++ W  +     WNN    + KT  C+K L +W+      S KRA   I R + +IQNL  S  NP+   ++  A+
Subjt:  NARQYRHRRFEMSWTNYEECKEIVQRVWHDRR----WNNDIPLISKTKECLKRLGQWSVSNYGGSIKRA---IARKEVEIQNLSCS--NPQNTIRLVKAE

Query:  QELEKLLEDEEIYWKQRARENWLQWG
        Q + +L   EE YW QRAR  WL+WG
Subjt:  QELEKLLEDEEIYWKQRARENWLQWG

XP_042988698.1 uncharacterized protein LOC122316231 [Carya illinoinensis]3.4e-0932.58Show/hide
Query:  SNNARQYRHR--RFEMSWTNYEECKEIVQRVWHDRRWNNDI-PLISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSNPQNTIR--LVKAEQE
        S    +YR++  RFE  W   +EC +++ R W     N  I  +I +   C + L  W+   + G +K+ I R +  +Q+L  + P +  R  ++KA+ +
Subjt:  SNNARQYRHR--RFEMSWTNYEECKEIVQRVWHDRRWNNDI-PLISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSNPQNTIR--LVKAEQE

Query:  LEKLLEDEEIYWKQRARENWLQWGTEILSGSI
        L   LE EEI W QRA+  WL+ G + LSG +
Subjt:  LEKLLEDEEIYWKQRARENWLQWGTEILSGSI

TrEMBL top hitse value%identityAlignment
A0A2I4F8A3 uncharacterized protein LOC1089964362.0e-1036.36Show/hide
Query:  DGSNNARQYRHRRFEMSWTNYEECKEIVQRVWHDRRW--NNDIPL-ISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSNP---QNTIRLVKA
        +G N  R  R  R+E SW   E+C ++V+  W  R W  +N + L I   K C + L  WS ++ GGS  + + +K  ++  L  ++    Q TI+ VK 
Subjt:  DGSNNARQYRHRRFEMSWTNYEECKEIVQRVWHDRRW--NNDIPL-ISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSNP---QNTIRLVKA

Query:  EQELEKLLEDEEIYWKQRARENWLQWGTEILS
         +E+++LL++++I+WKQRA++ WLQ G EIL+
Subjt:  EQELEKLLEDEEIYWKQRARENWLQWGTEILS

A0A2N9I611 Uncharacterized protein5.2e-1138.05Show/hide
Query:  RFEMSWTNYEECKEIVQRVWHDRRWNNDIP---LISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSNP-QNTIRLVKAEQELEKLLEDEEIY
        RFE +WT +EEC++++  VW D   + + P   L+ K K C K L  WS +++ G+IK  +   E  ++ L  +N  Q++ ++   + E+ +LLE EE+Y
Subjt:  RFEMSWTNYEECKEIVQRVWHDRRWNNDIP---LISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSNP-QNTIRLVKAEQELEKLLEDEEIY

Query:  WKQRARENWLQWG
        WKQRAR  WL+ G
Subjt:  WKQRARENWLQWG

A0A6J1DRA0 uncharacterized protein LOC1110224232.1e-1243.69Show/hide
Query:  RHRRFEMSWTNYEECKEIVQRVWHDRRWNNDIPLISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSNPQN-TIRLVKAEQELEKLLEDEEIY
        R  RFE  W +++ECKEIV+RVW  +          K   CL+ L +W+V   GGS++ AI RKEVEIQ +           L +A+++LEKLLE+EE Y
Subjt:  RHRRFEMSWTNYEECKEIVQRVWHDRRWNNDIPLISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSNPQN-TIRLVKAEQELEKLLEDEEIY

Query:  WKQ
        W+Q
Subjt:  WKQ

A0A7N2LIH6 Uncharacterized protein1.2e-1034.71Show/hide
Query:  NNARQYRHR-RFEMSWTNYEECKEIVQRVWHDRRWNNDIPLISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSN--PQNTIRLVKAEQELEK
        NN R+ + R  FE  WT  EECKEIV+  W   R ++ +P+  + + C K L QW+ +++ G++ + I +K+  +Q L   N   +    +   ++E+ +
Subjt:  NNARQYRHR-RFEMSWTNYEECKEIVQRVWHDRRWNNDIPLISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSN--PQNTIRLVKAEQELEK

Query:  LLEDEEIYWKQRARENWLQWG
        L   EE+ WKQR+R +WLQ+G
Subjt:  LLEDEEIYWKQRARENWLQWG

A0A803NMB3 Uncharacterized protein2.6e-1037.17Show/hide
Query:  RFEMSWTNYEECKEIVQRVWHDRRWNNDIP-LISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEI---QNLSCSNPQNTIRLVKAEQELEKLLEDEEIY
        RFE  W +  ECKE++ + W+   + + +  L+S    C   L QW    + GS+K+ IA  + ++    NL+  N +N   L +AE  L+ LLE EEIY
Subjt:  RFEMSWTNYEECKEIVQRVWHDRRWNNDIP-LISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEI---QNLSCSNPQNTIRLVKAEQELEKLLEDEEIY

Query:  WKQRARENWLQWG
        W+QR+R +WL  G
Subjt:  WKQRARENWLQWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGGAATAATGATAGATGGATGGATGGTAGTAACAATGCAAGGCAGTATAGGCATAGAAGATTTGAGATGTCCTGGACTAATTATGAGGAGTGTAAGGAAATTGT
GCAGAGGGTATGGCATGACAGGAGGTGGAATAATGATATTCCTTTGATTAGCAAAACTAAGGAGTGCTTGAAAAGACTGGGGCAATGGAGTGTTTCCAATTATGGTGGTT
CTATCAAAAGGGCTATTGCTAGGAAGGAGGTTGAAATCCAAAACCTTAGTTGTAGCAATCCTCAAAATACAATCAGATTGGTCAAAGCCGAACAGGAGTTAGAGAAACTT
CTAGAGGATGAAGAAATTTATTGGAAGCAAAGAGCCCGGGAGAATTGGTTGCAATGGGGGACCGAAATACTAAGTGGTTCCATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGGAATAATGATAGATGGATGGATGGTAGTAACAATGCAAGGCAGTATAGGCATAGAAGATTTGAGATGTCCTGGACTAATTATGAGGAGTGTAAGGAAATTGT
GCAGAGGGTATGGCATGACAGGAGGTGGAATAATGATATTCCTTTGATTAGCAAAACTAAGGAGTGCTTGAAAAGACTGGGGCAATGGAGTGTTTCCAATTATGGTGGTT
CTATCAAAAGGGCTATTGCTAGGAAGGAGGTTGAAATCCAAAACCTTAGTTGTAGCAATCCTCAAAATACAATCAGATTGGTCAAAGCCGAACAGGAGTTAGAGAAACTT
CTAGAGGATGAAGAAATTTATTGGAAGCAAAGAGCCCGGGAGAATTGGTTGCAATGGGGGACCGAAATACTAAGTGGTTCCATTTAA
Protein sequenceShow/hide protein sequence
MSWNNDRWMDGSNNARQYRHRRFEMSWTNYEECKEIVQRVWHDRRWNNDIPLISKTKECLKRLGQWSVSNYGGSIKRAIARKEVEIQNLSCSNPQNTIRLVKAEQELEKL
LEDEEIYWKQRARENWLQWGTEILSGSI