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Lag0011881 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011881
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA repair protein recA
Genome locationchr1:34326890..34332174
RNA-Seq ExpressionLag0011881
SyntenyLag0011881
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
InterPro domainsIPR013765 - DNA recombination and repair protein RecA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603184.1 DNA repair protein recA-like 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]7.3e-2087.1Show/hide
Query:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        RTTEKDAALRLA++QLAG+FGKESMLCLQRFFSSR APVISTGSLKLDLALGIGGLPK + +
Subjt:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

KAG6603185.1 Apyrase, partial [Cucurbita argyrosperma subsp. sororia]7.3e-2093.1Show/hide
Query:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPK
        RTTEKDAALRLA++QLAG+FGKESMLCLQRFFSSR APVISTGSLKLDLALGIGGLPK
Subjt:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPK

XP_022928640.1 DNA repair protein recA homolog 2, mitochondrial isoform X2 [Cucurbita moschata]7.3e-2087.1Show/hide
Query:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        RTTEKDAALRLA++QLAG+FGKESMLCLQRFFSSR APVISTGSLKLDLALGIGGLPK + +
Subjt:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

XP_022967812.1 DNA repair protein recA homolog 2, mitochondrial [Cucurbita maxima]7.3e-2087.1Show/hide
Query:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        RTTEKDAALRLA++QLAG+FGKESMLCLQRFFSSR APVISTGSLKLDLALGIGGLPK + +
Subjt:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

XP_038883413.1 DNA repair protein recA homolog 2, mitochondrial isoform X1 [Benincasa hispida]1.5e-2090.32Show/hide
Query:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        RTTEKDA LR AISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLD+ALGIGGLPK + I
Subjt:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

TrEMBL top hitse value%identityAlignment
A0A6J1DI72 DNA repair protein recA homolog 2, mitochondrial isoform X25.1e-1985.48Show/hide
Query:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        RTT+KDAALRLAISQL+GDFG+ESML LQ+FF SRYAPVISTGSLKLDLALGIGGLPK + I
Subjt:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

A0A6J1DKH3 DNA repair protein recA homolog 2, mitochondrial isoform X15.1e-1985.48Show/hide
Query:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        RTT+KDAALRLAISQL+GDFG+ESML LQ+FF SRYAPVISTGSLKLDLALGIGGLPK + I
Subjt:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

A0A6J1ELF3 DNA repair protein recA homolog 2, mitochondrial isoform X13.5e-2087.1Show/hide
Query:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        RTTEKDAALRLA++QLAG+FGKESMLCLQRFFSSR APVISTGSLKLDLALGIGGLPK + +
Subjt:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

A0A6J1ES72 DNA repair protein recA homolog 2, mitochondrial isoform X23.5e-2087.1Show/hide
Query:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        RTTEKDAALRLA++QLAG+FGKESMLCLQRFFSSR APVISTGSLKLDLALGIGGLPK + +
Subjt:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

A0A6J1HRU9 DNA repair protein recA homolog 2, mitochondrial3.5e-2087.1Show/hide
Query:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        RTTEKDAALRLA++QLAG+FGKESMLCLQRFFSSR APVISTGSLKLDLALGIGGLPK + +
Subjt:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

SwissProt top hitse value%identityAlignment
A1VUC3 Protein RecA6.2e-0645.9Show/hide
Query:  PSARTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPK
        P+A  TEK  AL +A++Q+   FGK +++ L          V+STGSL LD+ALG+GGLP+
Subjt:  PSARTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPK

B9JX56 Protein RecA4.8e-0646.77Show/hide
Query:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        +T +K  AL  A+SQ+   FGK S++ L           +STGSL LD+ALGIGGLPK + I
Subjt:  RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

Q3ST50 Protein RecA6.2e-0647.46Show/hide
Query:  EKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        +K  AL  A+SQ+   FGK S++ L +   S    VIS+GSL LD+ALG+GGLPK + +
Subjt:  EKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

Q8RY99 DNA repair protein recA homolog 2, mitochondrial4.8e-1455.56Show/hide
Query:  ISSTLEHLAFPLCSTPSAR-TTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        +SS +E     L   P  R   EKD AL LA+SQL+GDF K+S L LQRF+  R   VISTGSL LDLALG+GGLPK + +
Subjt:  ISSTLEHLAFPLCSTPSAR-TTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

Q9ZUP2 DNA repair protein recA homolog 3, mitochondrial5.1e-0851.79Show/hide
Query:  TEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPK
        ++K+ AL+ A+ Q+   FGK S++ L R  S R  PV STGS  LD+ALG+GGLPK
Subjt:  TEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPK

Arabidopsis top hitse value%identityAlignment
AT2G19490.1 recA DNA recombination family protein3.6e-0951.79Show/hide
Query:  TEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPK
        ++K+ AL+ A+ Q+   FGK S++ L R  S R  PV STGS  LD+ALG+GGLPK
Subjt:  TEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPK

AT3G10140.1 RECA homolog 33.4e-1555.56Show/hide
Query:  ISSTLEHLAFPLCSTPSAR-TTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        +SS +E     L   P  R   EKD AL LA+SQL+GDF K+S L LQRF+  R   VISTGSL LDLALG+GGLPK + +
Subjt:  ISSTLEHLAFPLCSTPSAR-TTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

AT3G32920.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein4.6e-0457.14Show/hide
Query:  LQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        L R  S R  PV STGS  LD+ALG+GGLPK + +
Subjt:  LQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI

AT3G32920.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein4.6e-0457.14Show/hide
Query:  LQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI
        L R  S R  PV STGS  LD+ALG+GGLPK + +
Subjt:  LQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAAGCCTTGTTCTTCAATTTTGCAGCTGGATTTGATGAGGATCTGAGCTTCGATCTTCGGTTCTGCAGAATGAGCTTCAATCTTCGGTTTCTTCTGAGAGCTTT
CTCTTCTTCCTTTTCTTCTGTCCTCCGTCCCTCAAATGAGAGGTCATGCCTTCTATTTATAGAGTTTTCTAAAGATCTGAAACGGGGAGGGAGGGAGGACCTCCCTCCTT
CGGTTCTCGCCGAAAAATCGAAGGAGGGAGGTTCTCCCTCCCTCCCTGTTTCAGATCCAAAACGGGGAGGGAGGGAGGACCTCCCTCCTTCGGTTCTCACCGGAAAATCG
CCTCACTCCCTCCCCGTTTCAGATCCGAAACAGGGAGGGAGGGAGTCCCTCCCCGTTTCGGATCTGAAACAGGGAGGGAGGACCTCCCTCCTTCGGTTCTCGCCGGAAAA
TCGAAGGAGGGAGGACGAGCACCGAGAACAACAATGGAACTTCTTCTCTGCAAAATTCCAAAGCGCCAAAGCTCTTAATCTTCAAACCCTAATCCGAAGACTCTCCCCCA
ATAAGCTTTACGAGGCATGTCATTCTTCTACGCACCTTCACTCTTCCGCTATCGCCATCTCAAGCACTTTGGAGCACCTCGCTTTTCCTCTCTGTTCCACTCCCTCCGCC
AGAACAACAGAGAAAGATGCTGCACTGCGTCTTGCAATCTCTCAGCTTGCTGGTGATTTTGGAAAGGAATCTATGTTGTGTTTGCAGAGGTTTTTCAGCTCCCGTTATGC
ACCTGTGATTTCTACTGGATCATTAAAGCTTGACCTTGCTCTTGGGATTGGAGGACTGCCTAAGTTAAAGTTCATTCCTTTTCAGTACACTTGTTACTTCCCTTCCTTTC
CATTTGACATTACCCACATATACGTGGTGTTGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAAGCCTTGTTCTTCAATTTTGCAGCTGGATTTGATGAGGATCTGAGCTTCGATCTTCGGTTCTGCAGAATGAGCTTCAATCTTCGGTTTCTTCTGAGAGCTTT
CTCTTCTTCCTTTTCTTCTGTCCTCCGTCCCTCAAATGAGAGGTCATGCCTTCTATTTATAGAGTTTTCTAAAGATCTGAAACGGGGAGGGAGGGAGGACCTCCCTCCTT
CGGTTCTCGCCGAAAAATCGAAGGAGGGAGGTTCTCCCTCCCTCCCTGTTTCAGATCCAAAACGGGGAGGGAGGGAGGACCTCCCTCCTTCGGTTCTCACCGGAAAATCG
CCTCACTCCCTCCCCGTTTCAGATCCGAAACAGGGAGGGAGGGAGTCCCTCCCCGTTTCGGATCTGAAACAGGGAGGGAGGACCTCCCTCCTTCGGTTCTCGCCGGAAAA
TCGAAGGAGGGAGGACGAGCACCGAGAACAACAATGGAACTTCTTCTCTGCAAAATTCCAAAGCGCCAAAGCTCTTAATCTTCAAACCCTAATCCGAAGACTCTCCCCCA
ATAAGCTTTACGAGGCATGTCATTCTTCTACGCACCTTCACTCTTCCGCTATCGCCATCTCAAGCACTTTGGAGCACCTCGCTTTTCCTCTCTGTTCCACTCCCTCCGCC
AGAACAACAGAGAAAGATGCTGCACTGCGTCTTGCAATCTCTCAGCTTGCTGGTGATTTTGGAAAGGAATCTATGTTGTGTTTGCAGAGGTTTTTCAGCTCCCGTTATGC
ACCTGTGATTTCTACTGGATCATTAAAGCTTGACCTTGCTCTTGGGATTGGAGGACTGCCTAAGTTAAAGTTCATTCCTTTTCAGTACACTTGTTACTTCCCTTCCTTTC
CATTTGACATTACCCACATATACGTGGTGTTGGTTTGA
Protein sequenceShow/hide protein sequence
MIEALFFNFAAGFDEDLSFDLRFCRMSFNLRFLLRAFSSSFSSVLRPSNERSCLLFIEFSKDLKRGGREDLPPSVLAEKSKEGGSPSLPVSDPKRGGREDLPPSVLTGKS
PHSLPVSDPKQGGRESLPVSDLKQGGRTSLLRFSPENRRREDEHREQQWNFFSAKFQSAKALNLQTLIRRLSPNKLYEACHSSTHLHSSAIAISSTLEHLAFPLCSTPSA
RTTEKDAALRLAISQLAGDFGKESMLCLQRFFSSRYAPVISTGSLKLDLALGIGGLPKLKFIPFQYTCYFPSFPFDITHIYVVLV