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Lag0011891 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011891
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:34565371..34566021
RNA-Seq ExpressionLag0011891
SyntenyLag0011891
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015382410.1 uncharacterized protein LOC107175497 [Citrus sinensis]3.4e-1729.13Show/hide
Query:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLGS------------------------DSP
        E++ +   + +  E+   I  +       E     C VGK++  R VNLE LR  ML +W  ++  RIE LGS                        D  
Subjt:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLGS------------------------DSP

Query:  ALI-------------DFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYER
         ++              F+   FW H+  +P+ ++   M + LG  I  V D+     G+ IG I R+R+ ++ITKPLR+ + ++  ++ SI  PI YER
Subjt:  ALI-------------DFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYER

Query:  LPNFCF
        LP+FCF
Subjt:  LPNFCF

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]2.3e-2933.01Show/hide
Query:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------
        EI + W + + + +E   + +    P+L    V++C V K+ T++ ++ EA+R VM SVW VH STR E LG                            
Subjt:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------

Query:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYER
                 ++ P  ++F+ CAFW  I+ +P   ++  MA  LG+ +  V ++ G G   W GP +RVRV ++++KPLRR ++LK S+ K IWCP++YE+
Subjt:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYER

Query:  LPNFCF
        LP+FC+
Subjt:  LPNFCF

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]1.5e-2030.65Show/hide
Query:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------
        EI E W N  L++E+   I +  + PL+    VQ   VGK+ T++ +++EA R VM S+W VH ST IE  G                            
Subjt:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------

Query:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYE
                 +D P  ++F+  A W  I+ +P   +   MA+ LG+ I  V ++   G  +W GP +RVRV ++I+KP +R ++++  ++K  WCP++YE
Subjt:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYE

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]9.0e-1829.95Show/hide
Query:  IVEQWSNMRL-SEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------
        ++  W   +L SEE+  A+ V +D   + E  +    VGK++  R ++ + L RV+L  W V     +E +G                            
Subjt:  IVEQWSNMRL-SEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------

Query:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDK-SIWCPIQYE
                 S + + ++F+R AFW H+  +P+++L   MA  LG+ I   VDV     G   G  +R+RV+++ITKPLRR +++ I       W PIQYE
Subjt:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDK-SIWCPIQYE

Query:  RLPNFCF
        RLP+FC+
Subjt:  RLPNFCF

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]5.6e-2833.98Show/hide
Query:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------
        +I + W N  L +EE   I +    P+L    +Q+C VGK+  ++ + +EA   VM  VW +H STRIE  G                            
Subjt:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------

Query:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYER
                 ++ P  ID S CAFW  I+ +    +T  MA+ LG+ +  V +V G    DW+ P + VRV +N+ KPLRR +++K S+ K IWCP++YER
Subjt:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYER

Query:  LPNFCF
        LP+FC+
Subjt:  LPNFCF

TrEMBL top hitse value%identityAlignment
A0A2N9E6P9 CCHC-type domain-containing protein2.2e-1731.73Show/hide
Query:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQ--VCEVGKVITNRFVNLEALRRVMLSVWNVHRSTR----------------------IEGL-----
        E+VE+W    L+E+E     V  D   +  S VQ   C +GK+IT++  N  AL+  ML +W V R TR                      + GL     
Subjt:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQ--VCEVGKVITNRFVNLEALRRVMLSVWNVHRSTR----------------------IEGL-----

Query:  ----------GSDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQY
                  GS   A I FS+C FW  ++ +PLN++T    + LG+ +  VV V    GG   GP +R+R+ L+ TKP+ R   +       +W   +Y
Subjt:  ----------GSDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQY

Query:  ERLPNFCF
        ERLP  CF
Subjt:  ERLPNFCF

A0A6J1D765 uncharacterized protein LOC1110179021.1e-2933.01Show/hide
Query:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------
        EI + W + + + +E   + +    P+L    V++C V K+ T++ ++ EA+R VM SVW VH STR E LG                            
Subjt:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------

Query:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYER
                 ++ P  ++F+ CAFW  I+ +P   ++  MA  LG+ +  V ++ G G   W GP +RVRV ++++KPLRR ++LK S+ K IWCP++YE+
Subjt:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYER

Query:  LPNFCF
        LP+FC+
Subjt:  LPNFCF

A0A6J1DP89 uncharacterized protein LOC1110229327.1e-2130.65Show/hide
Query:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------
        EI E W N  L++E+   I +  + PL+    VQ   VGK+ T++ +++EA R VM S+W VH ST IE  G                            
Subjt:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------

Query:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYE
                 +D P  ++F+  A W  I+ +P   +   MA+ LG+ I  V ++   G  +W GP +RVRV ++I+KP +R ++++  ++K  WCP++YE
Subjt:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYE

A0A6J1DU55 uncharacterized protein LOC1110231354.3e-1829.95Show/hide
Query:  IVEQWSNMRL-SEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------
        ++  W   +L SEE+  A+ V +D   + E  +    VGK++  R ++ + L RV+L  W V     +E +G                            
Subjt:  IVEQWSNMRL-SEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------

Query:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDK-SIWCPIQYE
                 S + + ++F+R AFW H+  +P+++L   MA  LG+ I   VDV     G   G  +R+RV+++ITKPLRR +++ I       W PIQYE
Subjt:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDK-SIWCPIQYE

Query:  RLPNFCF
        RLP+FC+
Subjt:  RLPNFCF

A0A6J1DVS4 uncharacterized protein LOC1110235552.7e-2833.98Show/hide
Query:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------
        +I + W N  L +EE   I +    P+L    +Q+C VGK+  ++ + +EA   VM  VW +H STRIE  G                            
Subjt:  EIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLG----------------------------

Query:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYER
                 ++ P  ID S CAFW  I+ +    +T  MA+ LG+ +  V +V G    DW+ P + VRV +N+ KPLRR +++K S+ K IWCP++YER
Subjt:  ---------SDSPALIDFSRCAFWAHINKVPLNFLTPAMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYER

Query:  LPNFCF
        LP+FC+
Subjt:  LPNFCF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCAGTGGGATCGAGCAGTATTGCCGAGATAGTGGAACAATGGAGTAATATGCGCTTATCGGAAGAGGAACGGACTGCGATTCCGGTGCTGTTGGATGTCCCGCT
GCTCGACGAGTCGACGGTCCAAGTTTGCGAGGTAGGGAAGGTGATTACCAATCGCTTCGTAAACCTAGAGGCGCTCCGGAGGGTGATGCTCTCAGTTTGGAATGTCCACA
GATCTACGAGGATTGAAGGGCTGGGTTCTGATAGCCCAGCCCTCATCGACTTCTCCAGGTGCGCTTTCTGGGCACATATAAATAAGGTTCCTCTAAATTTCCTTACTCCC
GCAATGGCGCGTGCTCTGGGTAGTGTTATCGAACCAGTCGTGGATGTTGCGGGTTGTGGAGGTGGGGATTGGATAGGACCGATTATGAGGGTGAGGGTTATGTTGAATAT
TACGAAGCCTCTTCGACGTGTGGTTCGGTTGAAGATTAGTGAGGATAAGTCGATTTGGTGCCCAATCCAATACGAGCGGCTCCCTAATTTTTGCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCAGTGGGATCGAGCAGTATTGCCGAGATAGTGGAACAATGGAGTAATATGCGCTTATCGGAAGAGGAACGGACTGCGATTCCGGTGCTGTTGGATGTCCCGCT
GCTCGACGAGTCGACGGTCCAAGTTTGCGAGGTAGGGAAGGTGATTACCAATCGCTTCGTAAACCTAGAGGCGCTCCGGAGGGTGATGCTCTCAGTTTGGAATGTCCACA
GATCTACGAGGATTGAAGGGCTGGGTTCTGATAGCCCAGCCCTCATCGACTTCTCCAGGTGCGCTTTCTGGGCACATATAAATAAGGTTCCTCTAAATTTCCTTACTCCC
GCAATGGCGCGTGCTCTGGGTAGTGTTATCGAACCAGTCGTGGATGTTGCGGGTTGTGGAGGTGGGGATTGGATAGGACCGATTATGAGGGTGAGGGTTATGTTGAATAT
TACGAAGCCTCTTCGACGTGTGGTTCGGTTGAAGATTAGTGAGGATAAGTCGATTTGGTGCCCAATCCAATACGAGCGGCTCCCTAATTTTTGCTTCTAG
Protein sequenceShow/hide protein sequence
MAPVGSSSIAEIVEQWSNMRLSEEERTAIPVLLDVPLLDESTVQVCEVGKVITNRFVNLEALRRVMLSVWNVHRSTRIEGLGSDSPALIDFSRCAFWAHINKVPLNFLTP
AMARALGSVIEPVVDVAGCGGGDWIGPIMRVRVMLNITKPLRRVVRLKISEDKSIWCPIQYERLPNFCF