; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011916 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011916
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:34976125..34979681
RNA-Seq ExpressionLag0011916
SyntenyLag0011916
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5514982.1 hypothetical protein RHGRI_036130 [Rhododendron griersonianum]1.2e-1134.17Show/hide
Query:  GYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRGGYVVVE
        G+PFTW+N+R   + V++R D+F+ S +     P A V +L   GSNH  +LL       ++ +RF+++  W    EC   +  AW   V G   + + E
Subjt:  GYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRGGYVVVE

Query:  KIQRTRMTILQWMKNATVNS
        KI+  RM  L W K   +NS
Subjt:  KIQRTRMTILQWMKNATVNS

KAG5563042.1 hypothetical protein RHGRI_005701 [Rhododendron griersonianum]4.9e-1328.74Show/hide
Query:  CFTVKPRGVRRLMFTLEG-------------GGRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRF
        C   K  GV R  ++L+G             G  GYPFTW N R  +D V+ R D+ + + + C  + QA V++L ++GS+H  + L++      +   F
Subjt:  CFTVKPRGVRRLMFTLEG-------------GGRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRF

Query:  VYNRGWRASLECKQAMEGAWVGNVEGRGGYVVVEKIQRTRMTILQWMKNATVNSGQEIRRLEMTKQFELDRVVP
         ++  W    E +  +  AW   ++G   ++V +KIQ  R ++  W +    NSG+ I  L+  K F L    P
Subjt:  VYNRGWRASLECKQAMEGAWVGNVEGRGGYVVVEKIQRTRMTILQWMKNATVNSGQEIRRLEMTKQFELDRVVP

OMO82636.1 reverse transcriptase [Corchorus capsularis]7.0e-1228.16Show/hide
Query:  PKFDFPVKNKNKATKLETIRRQLNFEGCFTVKPRGVRRLMFTLEGG--GRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRM
        P   F ++ KN+   +E + +   FE  F V P G+   +   E      G  FTW  RR  V L++ R D+ + +       P AKV  L ++GS+H  
Subjt:  PKFDFPVKNKNKATKLETIRRQLNFEGCFTVKPRGVRRLMFTLEGG--GRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRM

Query:  VLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRGGYVVVEKIQRTRMTILQWMKNATVNSGQEI
        +L+       K PK F +   W    +C   +   W  + +G  GY +V+K++ +R  +++W KN   N+ ++I
Subjt:  VLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRGGYVVVEKIQRTRMTILQWMKNATVNSGQEI

ONI17050.1 hypothetical protein PRUPE_3G135000 [Prunus persica]4.0e-1532.43Show/hide
Query:  LEGGGRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRG
        L+ G  GYPFTWSNRR E + ++ R D+ + S +    + +AKVS+    GS+H ++LL+V  +++ +  RF+Y+  W   + C+ A++ +W     G  
Subjt:  LEGGGRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRG

Query:  GYVVVEKIQRTRMTILQWMKNATVNSGQEIRRLEMTKQFELDRVVPNY
         Y +VEK++  R  + QW + A  N+   IR  E+ K+ ++    P +
Subjt:  GYVVVEKIQRTRMTILQWMKNATVNSGQEIRRLEMTKQFELDRVVPNY

XP_025652024.1 uncharacterized protein LOC112748031 [Arachis hypogaea]4.1e-1232.03Show/hide
Query:  GYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRGGYVVVE
        G PFTWSNRR+  DL+  R D+ +G+E    ++P A V  LT  GS+H  ++L    L  +  +RF +   W    E ++ +   W    +G   YV+ +
Subjt:  GYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRGGYVVVE

Query:  KIQRTRMTILQWMKNATVNSGQEIRRLE
        K++  R  ++ W +    NS + I  LE
Subjt:  KIQRTRMTILQWMKNATVNSGQEIRRLE

TrEMBL top hitse value%identityAlignment
A0A1R3IJA9 Reverse transcriptase3.4e-1228.16Show/hide
Query:  PKFDFPVKNKNKATKLETIRRQLNFEGCFTVKPRGVRRLMFTLEGG--GRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRM
        P   F ++ KN+   +E + +   FE  F V P G+   +   E      G  FTW  RR  V L++ R D+ + +       P AKV  L ++GS+H  
Subjt:  PKFDFPVKNKNKATKLETIRRQLNFEGCFTVKPRGVRRLMFTLEGG--GRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRM

Query:  VLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRGGYVVVEKIQRTRMTILQWMKNATVNSGQEI
        +L+       K PK F +   W    +C   +   W  + +G  GY +V+K++ +R  +++W KN   N+ ++I
Subjt:  VLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRGGYVVVEKIQRTRMTILQWMKNATVNSGQEI

A0A251Q0X9 Reverse transcriptase domain-containing protein1.9e-1532.43Show/hide
Query:  LEGGGRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRG
        L+ G  GYPFTWSNRR E + ++ R D+ + S +    + +AKVS+    GS+H ++LL+V  +++ +  RF+Y+  W   + C+ A++ +W     G  
Subjt:  LEGGGRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRG

Query:  GYVVVEKIQRTRMTILQWMKNATVNSGQEIRRLEMTKQFELDRVVPNY
         Y +VEK++  R  + QW + A  N+   IR  E+ K+ ++    P +
Subjt:  GYVVVEKIQRTRMTILQWMKNATVNSGQEIRRLEMTKQFELDRVVPNY

A0A5A7NXH9 RNA-directed DNA polymerase-like protein7.6e-1228.8Show/hide
Query:  GYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRGGYVVVE
        G+PFTWSN RK  D V+++ D+F+ S +   ++P+  V ++  + S+H ++L+ + G   K   RF ++R W       + ++ AW   V G G Y   +
Subjt:  GYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRGGYVVVE

Query:  KIQRTRMTILQWMKNATVNSGQEIR
        +++  +  +L W+ +   NS + I+
Subjt:  KIQRTRMTILQWMKNATVNSGQEIR

A0A5A7P590 DNAse I-like superfamily protein5.8e-1231.94Show/hide
Query:  RGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRGGYVVV
        +GY +TW N R     V+ R D+  GS     ++  AKV  L    S+H M++L   G + K P+RF +++ W     CK+ +E AW     G   +++ 
Subjt:  RGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRGGYVVV

Query:  EKIQRTRMTILQWMKNATVNSGQEIRRLEMTKQFELDRVVPNYQ
        E I++TR+ + QW KN  ++ G+E R   +T + E  R +  Y+
Subjt:  EKIQRTRMTILQWMKNATVNSGQEIRRLEMTKQFELDRVVPNYQ

M5VH78 Reverse transcriptase domain-containing protein (Fragment)1.9e-1532.43Show/hide
Query:  LEGGGRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRG
        L+ G  GYPFTWSNRR E + ++ R D+ + S +    + +AKVS+    GS+H ++LL+V  +++ +  RF+Y+  W   + C+ A++ +W     G  
Subjt:  LEGGGRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQAMEGAWVGNVEGRG

Query:  GYVVVEKIQRTRMTILQWMKNATVNSGQEIRRLEMTKQFELDRVVPNY
         Y +VEK++  R  + QW + A  N+   IR  E+ K+ ++    P +
Subjt:  GYVVVEKIQRTRMTILQWMKNATVNSGQEIRRLEMTKQFELDRVVPNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACAACAGATCGCGGCGTTCGTGCTTCGTATTGGACGGTGGCGTTCGTGCTTCGTGGTGGACGACGGCGTTCGTGCTTCGTGGTGGACGGCGGCGTTCGTG
GCTTCGTGGGAAAGAGAGAATGAGAGAAAGAGAGGGAGGAGGGCAGGCTTCAACGAGAGTGGTTGGGGAGAGAATAGGGAAAATATCTCGGGGGAGGTGGAATTG
CAGGGGGTTCAGCAGCGAAAGTTTATATGCCTGAAGTTGGAGTTGGATGTGACAAAGGCGCTGGTGAGGGGGCCTGATTGTGATGATCGGGGAAAGGAAAATCAG
TCTCCGGTGCCAGAGAACAAACTGAAAGATTTGGGAAAGGATGTTGGCGAGGATCGTAAAGAGATTTTACCTGATTTACCAGGGGTTTCGTGTGAGCAGGTGAAC
CAAATCCCAGAAGTGGATTCGACATTCGTGAGTCGGATGGATAATCAAGCTAAGAATGGGCCAGTGCAAACTGAGGCCCGAGTTGAAGGAAAGAAACCCCCTGAC
AGTTCGATCCTTGAAGGAGCAAGCGAAGTTCCATTTCCCAAGTTTGATTTTCCTGTAAAAAACAAGAATAAAGCGACAAAATTGGAAACTATTAGAAGACAGCTG
AATTTTGAAGGGTGTTTCACTGTAAAACCGAGAGGAGTTAGAAGGCTTATGTTTACTTTGGAAGGTGGCGGCAGAGGATATCCCTTTACATGGTCAAACCGAAGG
AAGGAGGTTGACTTAGTCAAATTGAGATCGGACCAATTTGTTGGATCAGAGAACTTGTGTGGGGAATGGCCACAGGCAAAGGTGTCCTACCTAACGTCTTTAGGT
TCAAACCATCGAATGGTTCTGTTGCAAGTCGCTGGGCTGAGGTTGAAATATCCAAAGCGATTTGTGTATAACCGAGGCTGGAGAGCGAGTCTAGAGTGCAAGCAA
GCAATGGAAGGTGCATGGGTTGGGAATGTTGAGGGGAGAGGTGGCTATGTAGTTGTGGAGAAGATACAGAGAACTAGAATGACGATCCTACAGTGGATGAAGAAT
GCAACAGTGAATTCTGGACAGGAAATAAGGAGGCTTGAGATGACAAAACAGTTTGAATTGGATCGAGTGGTGCCGAATTACCAGGTGATTTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAACAACAGATCGCGGCGTTCGTGCTTCGTATTGGACGGTGGCGTTCGTGCTTCGTGGTGGACGACGGCGTTCGTGCTTCGTGGTGGACGGCGGCGTTCGTG
GCTTCGTGGGAAAGAGAGAATGAGAGAAAGAGAGGGAGGAGGGCAGGCTTCAACGAGAGTGGTTGGGGAGAGAATAGGGAAAATATCTCGGGGGAGGTGGAATTG
CAGGGGGTTCAGCAGCGAAAGTTTATATGCCTGAAGTTGGAGTTGGATGTGACAAAGGCGCTGGTGAGGGGGCCTGATTGTGATGATCGGGGAAAGGAAAATCAG
TCTCCGGTGCCAGAGAACAAACTGAAAGATTTGGGAAAGGATGTTGGCGAGGATCGTAAAGAGATTTTACCTGATTTACCAGGGGTTTCGTGTGAGCAGGTGAAC
CAAATCCCAGAAGTGGATTCGACATTCGTGAGTCGGATGGATAATCAAGCTAAGAATGGGCCAGTGCAAACTGAGGCCCGAGTTGAAGGAAAGAAACCCCCTGAC
AGTTCGATCCTTGAAGGAGCAAGCGAAGTTCCATTTCCCAAGTTTGATTTTCCTGTAAAAAACAAGAATAAAGCGACAAAATTGGAAACTATTAGAAGACAGCTG
AATTTTGAAGGGTGTTTCACTGTAAAACCGAGAGGAGTTAGAAGGCTTATGTTTACTTTGGAAGGTGGCGGCAGAGGATATCCCTTTACATGGTCAAACCGAAGG
AAGGAGGTTGACTTAGTCAAATTGAGATCGGACCAATTTGTTGGATCAGAGAACTTGTGTGGGGAATGGCCACAGGCAAAGGTGTCCTACCTAACGTCTTTAGGT
TCAAACCATCGAATGGTTCTGTTGCAAGTCGCTGGGCTGAGGTTGAAATATCCAAAGCGATTTGTGTATAACCGAGGCTGGAGAGCGAGTCTAGAGTGCAAGCAA
GCAATGGAAGGTGCATGGGTTGGGAATGTTGAGGGGAGAGGTGGCTATGTAGTTGTGGAGAAGATACAGAGAACTAGAATGACGATCCTACAGTGGATGAAGAAT
GCAACAGTGAATTCTGGACAGGAAATAAGGAGGCTTGAGATGACAAAACAGTTTGAATTGGATCGAGTGGTGCCGAATTACCAGGTGATTTCCTAG
Protein sequenceShow/hide protein sequence
MQQQIAAFVLRIGRWRSCFVVDDGVRASWWTAAFVASWERENERKRGRRAGFNESGWGENRENISGEVELQGVQQRKFICLKLELDVTKALVRGPDCDDRGKENQ
SPVPENKLKDLGKDVGEDRKEILPDLPGVSCEQVNQIPEVDSTFVSRMDNQAKNGPVQTEARVEGKKPPDSSILEGASEVPFPKFDFPVKNKNKATKLETIRRQL
NFEGCFTVKPRGVRRLMFTLEGGGRGYPFTWSNRRKEVDLVKLRSDQFVGSENLCGEWPQAKVSYLTSLGSNHRMVLLQVAGLRLKYPKRFVYNRGWRASLECKQ
AMEGAWVGNVEGRGGYVVVEKIQRTRMTILQWMKNATVNSGQEIRRLEMTKQFELDRVVPNYQVIS