; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011917 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011917
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:34980028..34982736
RNA-Seq ExpressionLag0011917
SyntenyLag0011917
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48734.1 hypothetical protein EZV62_024609 [Acer yangbiense]5.4e-1634.12Show/hide
Query:  DLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD--
        D+    E M L E E +   +  D+       + LC VGKVL++K +N + F+RV+L +W V  S  IE   +NVF+  F +  +++R+++ GPW+FD  
Subjt:  DLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD--

Query:  ---------KSYWFWCLLEGRMTHLSWTFLVGRPHDWFGSVMRVRVVLNMAQPLRRVVRL-VKGMGRSLV
                 K Y+   L+ G +  L      G   D  G  +RVRV++N+ QPLRR++R+ V G G   V
Subjt:  ---------KSYWFWCLLEGRMTHLSWTFLVGRPHDWFGSVMRVRVVLNMAQPLRRVVRL-VKGMGRSLV

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.2e-1832.47Show/hide
Query:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD
        MD++   WE+   +  E+   ++    P+L    V+LC V K+ +SK ++ +A R VM SVW VH STR EP G N++VI F S++EK R++S GPWTF+
Subjt:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD

Query:  KS----------------------YW-------FWCLLEGRMTHLSWTF-----LVGRPHD-WFGSVMRVRVVLNMAQPLRRVVRLVKGMGRSL
        KS                      +W       F C+       L         + G   D W G  +RVRV +++++PLRR ++L    G+ +
Subjt:  KS----------------------YW-------FWCLLEGRMTHLSWTF-----LVGRPHD-WFGSVMRVRVVLNMAQPLRRVVRLVKGMGRSL

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]9.3e-1642.16Show/hide
Query:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD
        MD++   WEN  L++ +     + ++ PL+    VQ  AVGK+ +SK ++ +AFR VM S+W VH ST IE  G N++VI F S+ EK R+++ GPW+F+
Subjt:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD

Query:  KS
         S
Subjt:  KS

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]6.2e-2034.54Show/hide
Query:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD
        MDD+   WEN  L + E     +    P+L    +QLCAVGK+  SK +  +AF  VM  VW +H STRIE  G N++VI F ++ EK R+ SLGPWTFD
Subjt:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD

Query:  KSYW--------------------FWCLLE----GRMTHLSWTFLVGR-----------PHDWFGSVMRVRVVLNMAQPLRRVVRLVKGMGRSL
        KS                      FW  +       MT     FL  R            +DW    + VRV +N+ +PLRR +++    G+ +
Subjt:  KSYW--------------------FWCLLE----GRMTHLSWTFLVGR-----------PHDWFGSVMRVRVVLNMAQPLRRVVRLVKGMGRSL

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]6.9e-1946.08Show/hide
Query:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD
        MD++   WEN  L+  E   F V    P+L    +QLC VGK+ +SK ++  A   VM  VW +H STRIE  G N++VI F ++ EK+R++S GPWTFD
Subjt:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD

Query:  KS
        KS
Subjt:  KS

TrEMBL top hitse value%identityAlignment
A0A5C7GVA6 CCHC-type domain-containing protein2.6e-1634.12Show/hide
Query:  DLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD--
        D+    E M L E E +   +  D+       + LC VGKVL++K +N + F+RV+L +W V  S  IE   +NVF+  F +  +++R+++ GPW+FD  
Subjt:  DLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD--

Query:  ---------KSYWFWCLLEGRMTHLSWTFLVGRPHDWFGSVMRVRVVLNMAQPLRRVVRL-VKGMGRSLV
                 K Y+   L+ G +  L      G   D  G  +RVRV++N+ QPLRR++R+ V G G   V
Subjt:  ---------KSYWFWCLLEGRMTHLSWTFLVGRPHDWFGSVMRVRVVLNMAQPLRRVVRL-VKGMGRSLV

A0A6J1D765 uncharacterized protein LOC1110179025.7e-1932.47Show/hide
Query:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD
        MD++   WE+   +  E+   ++    P+L    V+LC V K+ +SK ++ +A R VM SVW VH STR EP G N++VI F S++EK R++S GPWTF+
Subjt:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD

Query:  KS----------------------YW-------FWCLLEGRMTHLSWTF-----LVGRPHD-WFGSVMRVRVVLNMAQPLRRVVRLVKGMGRSL
        KS                      +W       F C+       L         + G   D W G  +RVRV +++++PLRR ++L    G+ +
Subjt:  KS----------------------YW-------FWCLLEGRMTHLSWTF-----LVGRPHD-WFGSVMRVRVVLNMAQPLRRVVRLVKGMGRSL

A0A6J1DP89 uncharacterized protein LOC1110229324.5e-1642.16Show/hide
Query:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD
        MD++   WEN  L++ +     + ++ PL+    VQ  AVGK+ +SK ++ +AFR VM S+W VH ST IE  G N++VI F S+ EK R+++ GPW+F+
Subjt:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD

Query:  KS
         S
Subjt:  KS

A0A6J1DVS4 uncharacterized protein LOC1110235553.0e-2034.54Show/hide
Query:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD
        MDD+   WEN  L + E     +    P+L    +QLCAVGK+  SK +  +AF  VM  VW +H STRIE  G N++VI F ++ EK R+ SLGPWTFD
Subjt:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD

Query:  KSYW--------------------FWCLLE----GRMTHLSWTFLVGR-----------PHDWFGSVMRVRVVLNMAQPLRRVVRLVKGMGRSL
        KS                      FW  +       MT     FL  R            +DW    + VRV +N+ +PLRR +++    G+ +
Subjt:  KSYW--------------------FWCLLE----GRMTHLSWTFLVGR-----------PHDWFGSVMRVRVVLNMAQPLRRVVRLVKGMGRSL

A0A6J1DYG3 uncharacterized protein LOC1110246763.3e-1946.08Show/hide
Query:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD
        MD++   WEN  L+  E   F V    P+L    +QLC VGK+ +SK ++  A   VM  VW +H STRIE  G N++VI F ++ EK+R++S GPWTFD
Subjt:  MDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHRSTRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFD

Query:  KS
        KS
Subjt:  KS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCCTTCTCACTACCGATTGTTTTGCCCCTTCCACCGCCCACTTTGTCGCCGGCGCCGCCGTTCCAAAGAAAAAAAAACGAACAATTTGAGAATGGGAAG
ATTTCGATAGGGAAGATTTGTGAAAGAAAGAAAAAACGACCCGACCCGACCCAGCCCGACCCATTCGGGTCTAATCGGGTCGGTCTTTCTGGTTTACGTTGGGTT
CATGGCGGCGGGTCTTTGACGGTGAGGGCTTCTTGCCGGCGAGGTCTCCTTGAGGCGTGGGTCTTCTGCAGCGGTCTTCACGGGGTTGAGGTTTCTCCGGCGGTT
TCAGAGCTCGAAGTGGTCGGCGGCTGTCGATCTCCTTCATGGATTTTGGGTTGTCTTCAGCGGCGATGGAGCTTTAGGGGTTCGATGGTTGATCTCCGGCAGGGT
CGGTGTCGTCTCCGGTGCCTTCAGGGTCGAGGTTTCGGCGTTTGGTTTGATTTCGGATCTTCCCTTGTCGTGTTGGGGTTGTTTGTAGGCTTTGTGTGCTTTGCG
ATTTTGGTCTTGTGGTCTGGTTCAGTCTGTAGCTGTCGGTTGTGCTTGCGTGTTTGTTCTGTATTTGGTGGTCGCGGGTTTAGTTCTGTTTTTTTTATTTCGCTT
GCAAGTTTCGGCTTGTATTTTGGTGTTTGGTTGCTGGTTTTGGGTTCCACAGTTTGCGTTTCTGGTCCTATTTGGTCCTGCGATTTGGGCTGGGTTGTGAGTTCC
CTCGGTGCACGTATGGATGATCTTGTGGTTCAATGGGAGAATATGGGGTTATCAGAGGCAGAGTCGACGGCGTTCTCTGTGCCAGCAGATATTCCTCTCTTGGAT
GAATCAACAGTTCAACTGTGTGCAGTTGGTAAGGTTCTTTCTTCCAAGCCGGTGAATCCTGATGCCTTTCGTCGAGTAATGTTATCGGTTTGGAGTGTTCATCGT
TCTACCCGGATTGAACCTTGGGGGGATAATGTCTTCGTAATTCGGTTTCATTCCGTCACTGAAAAGCGGAGAATTATGAGTTTGGGCCCTTGGACTTTCGATAAG
TCTTATTGGTTCTGGTGTCTCCTCGAGGGTCGGATGACCCATCTCTCCTGGACTTTTCTCGTGGGAAGGCCACATGACTGGTTTGGCTCAGTAATGAGAGTTCGT
GTTGTCCTTAACATGGCTCAACCCCTTCGTCGTGTTGTCCGGCTTGTAAAGGGGATGGGTCGTTCTTTGGTGTCCTTTGCAGGAGTGCTCGAGGAGGGGAAGGCG
TGGGGGCTGACAATCAGTTTCTGTTTGGTGACTGGTTGCGGGTGTTCCATCTCGGCGTGGGTTGCTAATGTGACAGAGGAGGGTGGTGGCGTCCGGATATTCAGG
GGGGGCGGGGATCAAGTATGGCTGGTAGAGGGAGAGGCGGGGCCAGGTGGATCAGTCGAGGGGAGTTGTTCTGAGGGGGATAGGCTTCCCGGTTCCTTCGGTATC
CCCCTTCAGTCGACCCTGATATTGGGTGGCTTCTGCGGGAAGGTAAGGAGGTGGCCGATCCGGGTGTTGCTCCAGAAACTAGCTCTAAGCTGGTACGGTGCCTTT
GGCGCCGTCAGTGGCACACATACAGTCTCTTCTGGGCAGGAAGAGTTGGAAGCGGCTGGCCAGAACCTCTTTGAAGGACATTCCAATGTCTTATCTTCCTCAGTT
GTTAGTGGCACAAGCGATCAGCCCAGGGGGACCCGCCTGATGAGGATGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAATCCTTCTCACTACCGATTGTTTTGCCCCTTCCACCGCCCACTTTGTCGCCGGCGCCGCCGTTCCAAAGAAAAAAAAACGAACAATTTGAGAATGGGAAG
ATTTCGATAGGGAAGATTTGTGAAAGAAAGAAAAAACGACCCGACCCGACCCAGCCCGACCCATTCGGGTCTAATCGGGTCGGTCTTTCTGGTTTACGTTGGGTT
CATGGCGGCGGGTCTTTGACGGTGAGGGCTTCTTGCCGGCGAGGTCTCCTTGAGGCGTGGGTCTTCTGCAGCGGTCTTCACGGGGTTGAGGTTTCTCCGGCGGTT
TCAGAGCTCGAAGTGGTCGGCGGCTGTCGATCTCCTTCATGGATTTTGGGTTGTCTTCAGCGGCGATGGAGCTTTAGGGGTTCGATGGTTGATCTCCGGCAGGGT
CGGTGTCGTCTCCGGTGCCTTCAGGGTCGAGGTTTCGGCGTTTGGTTTGATTTCGGATCTTCCCTTGTCGTGTTGGGGTTGTTTGTAGGCTTTGTGTGCTTTGCG
ATTTTGGTCTTGTGGTCTGGTTCAGTCTGTAGCTGTCGGTTGTGCTTGCGTGTTTGTTCTGTATTTGGTGGTCGCGGGTTTAGTTCTGTTTTTTTTATTTCGCTT
GCAAGTTTCGGCTTGTATTTTGGTGTTTGGTTGCTGGTTTTGGGTTCCACAGTTTGCGTTTCTGGTCCTATTTGGTCCTGCGATTTGGGCTGGGTTGTGAGTTCC
CTCGGTGCACGTATGGATGATCTTGTGGTTCAATGGGAGAATATGGGGTTATCAGAGGCAGAGTCGACGGCGTTCTCTGTGCCAGCAGATATTCCTCTCTTGGAT
GAATCAACAGTTCAACTGTGTGCAGTTGGTAAGGTTCTTTCTTCCAAGCCGGTGAATCCTGATGCCTTTCGTCGAGTAATGTTATCGGTTTGGAGTGTTCATCGT
TCTACCCGGATTGAACCTTGGGGGGATAATGTCTTCGTAATTCGGTTTCATTCCGTCACTGAAAAGCGGAGAATTATGAGTTTGGGCCCTTGGACTTTCGATAAG
TCTTATTGGTTCTGGTGTCTCCTCGAGGGTCGGATGACCCATCTCTCCTGGACTTTTCTCGTGGGAAGGCCACATGACTGGTTTGGCTCAGTAATGAGAGTTCGT
GTTGTCCTTAACATGGCTCAACCCCTTCGTCGTGTTGTCCGGCTTGTAAAGGGGATGGGTCGTTCTTTGGTGTCCTTTGCAGGAGTGCTCGAGGAGGGGAAGGCG
TGGGGGCTGACAATCAGTTTCTGTTTGGTGACTGGTTGCGGGTGTTCCATCTCGGCGTGGGTTGCTAATGTGACAGAGGAGGGTGGTGGCGTCCGGATATTCAGG
GGGGGCGGGGATCAAGTATGGCTGGTAGAGGGAGAGGCGGGGCCAGGTGGATCAGTCGAGGGGAGTTGTTCTGAGGGGGATAGGCTTCCCGGTTCCTTCGGTATC
CCCCTTCAGTCGACCCTGATATTGGGTGGCTTCTGCGGGAAGGTAAGGAGGTGGCCGATCCGGGTGTTGCTCCAGAAACTAGCTCTAAGCTGGTACGGTGCCTTT
GGCGCCGTCAGTGGCACACATACAGTCTCTTCTGGGCAGGAAGAGTTGGAAGCGGCTGGCCAGAACCTCTTTGAAGGACATTCCAATGTCTTATCTTCCTCAGTT
GTTAGTGGCACAAGCGATCAGCCCAGGGGGACCCGCCTGATGAGGATGGGTTAG
Protein sequenceShow/hide protein sequence
MKSFSLPIVLPLPPPTLSPAPPFQRKKNEQFENGKISIGKICERKKKRPDPTQPDPFGSNRVGLSGLRWVHGGGSLTVRASCRRGLLEAWVFCSGLHGVEVSPAV
SELEVVGGCRSPSWILGCLQRRWSFRGSMVDLRQGRCRLRCLQGRGFGVWFDFGSSLVVLGLFVGFVCFAILVLWSGSVCSCRLCLRVCSVFGGRGFSSVFFISL
ASFGLYFGVWLLVLGSTVCVSGPIWSCDLGWVVSSLGARMDDLVVQWENMGLSEAESTAFSVPADIPLLDESTVQLCAVGKVLSSKPVNPDAFRRVMLSVWSVHR
STRIEPWGDNVFVIRFHSVTEKRRIMSLGPWTFDKSYWFWCLLEGRMTHLSWTFLVGRPHDWFGSVMRVRVVLNMAQPLRRVVRLVKGMGRSLVSFAGVLEEGKA
WGLTISFCLVTGCGCSISAWVANVTEEGGGVRIFRGGGDQVWLVEGEAGPGGSVEGSCSEGDRLPGSFGIPLQSTLILGGFCGKVRRWPIRVLLQKLALSWYGAF
GAVSGTHTVSSGQEELEAAGQNLFEGHSNVLSSSVVSGTSDQPRGTRLMRMG