; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011918 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011918
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:34982796..34983624
RNA-Seq ExpressionLag0011918
SyntenyLag0011918
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4308802.1 unnamed protein product [Prunus armeniaca]3.5e-1025.86Show/hide
Query:  VLECSGFRVSPGIPALGQVVQEKRPLVLFLSETKLSSSRMASAKRVLGL--------------------------------RTVFVLIAKVGVVVWLCCG
        +LEC GF     IP+     ++K+P ++F SETK +  +M   +R LG+                                R +  ++  V +  +   G
Subjt:  VLECSGFRVSPGIPALGQVVQEKRPLVLFLSETKLSSSRMASAKRVLGL--------------------------------RTVFVLIAKVGVVVWLCCG

Query:  VRLSPSAS-CHFR---ITTLMGGSRGTLIIGGSW---VSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVGI------NHLDYHQSDHRPIELVLSPQ
           +P    C      +  + G  +G  I+GG +   +  HE  G   +P+S++ AF+  ++ CGL  + F GI      +HL+Y  SDH P+ L L  +
Subjt:  VRLSPSAS-CHFR---ITTLMGGSRGTLIIGGSW---VSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVGI------NHLDYHQSDHRPIELVLSPQ

Query:  PGCWRRSSQRILRFDETWLKQAELQQLVRDSW
        P  W R  +R L F+E W      Q ++  +W
Subjt:  PGCWRRSSQRILRFDETWLKQAELQQLVRDSW

KAF5464386.1 hypothetical protein F2P56_014464 [Juglans regia]2.5e-0825.2Show/hide
Query:  GIPALGQVVQEKRPLVLFLSETKLSSSRMASAKRVLGLRTVFVLIAK-------------VGVVV---------------------WLCCGVRLSPSASC
        G+ AL  +V+E+ P+VLFL ETKLS   M   K  LG +    + ++             V +V+                     W   GV   P  S 
Subjt:  GIPALGQVVQEKRPLVLFLSETKLSSSRMASAKRVLGLRTVFVLIAK-------------VGVVV---------------------WLCCGVRLSPSASC

Query:  HFRITTLM-----GGSRGTLIIG--GSWVSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVG------------------------------------
              L+        +G L++G     +S +EK GGR +   ++ AF  VID C LLDLGF G                                    
Subjt:  HFRITTLM-----GGSRGTLIIG--GSWVSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVG------------------------------------

Query:  INHLDYHQSDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAELQQLVRDSWG
        ++H     SDH PI+L L  Q     R  +++ RF+  W+++   + ++  +WG
Subjt:  INHLDYHQSDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAELQQLVRDSWG

XP_012857002.1 PREDICTED: uncharacterized protein LOC105976270 [Erythranthe guttata]3.3e-0823.55Show/hide
Query:  CSGFRVSPGIPALGQVVQEKRPLVLFLSETKLSSSRMASAKR----------VLGLRTVFVLIAKVGVVV----------------------WLCCGVRL
        C G      I  LG ++++ RPL++FLSETK +   +   KR           +G     +L  +  V V                      W   G   
Subjt:  CSGFRVSPGIPALGQVVQEKRPLVLFLSETKLSSSRMASAKR----------VLGLRTVFVLIAKVGVVV----------------------WLCCGVRL

Query:  SPSASCHFRITTLMGGSRG----TLIIGGSW---VSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVG------------------------------
         P  S       ++   R       ++GG +   +S +EKEGG  +  +++ AF+  +D CGL DL F G                              
Subjt:  SPSASCHFRITTLMGGSRG----TLIIGGSW---VSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVG------------------------------

Query:  ------INHLDYHQSDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAELQQLVRDSW
              ++H+ Y  SDH P++LVL P      R  +R  RF+  WL++ + +++V+ +W
Subjt:  ------INHLDYHQSDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAELQQLVRDSW

XP_042951290.1 uncharacterized protein LOC122285342 [Carya illinoinensis]1.7e-0926.88Show/hide
Query:  GIPALGQVVQEKRPLVLFLSETKLSSSRMASAKRVLGLR-----------------------------TVFVLIAKV-----GVVVWLCCGVRLSPSA--
        G+ AL  +V+ K P +LFL ETKL++  M   K  LG +                             + F + AKV      V  W   G   +P    
Subjt:  GIPALGQVVQEKRPLVLFLSETKLSSSRMASAKRVLGLR-----------------------------TVFVLIAKV-----GVVVWLCCGVRLSPSA--

Query:  ---SCHFRITTLMGGSRGTLIIG--GSWVSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVG----------------------INHLDYHQ------
           S +   T L+   +G L++G     +S  EK GGRDKP  ++ AF++VID C L DLGF G                      +++L +H       
Subjt:  ---SCHFRITTLMGGSRGTLIIG--GSWVSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVG----------------------INHLDYHQ------

Query:  --------SDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAELQQLVRDSW
                SDH PI L L+   G  +   +++ RF+  W+   + +Q+++D+W
Subjt:  --------SDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAELQQLVRDSW

XP_042954684.1 uncharacterized protein LOC122291103 [Carya illinoinensis]1.1e-0827.68Show/hide
Query:  GIPALGQVVQEKRPLVLFLSETKLSSSRMASAKRVLGLRTVFVLIAKV-----GVVVWLCCGVRLSPSASCHFR----ITTLMGGS-RGTLIIG--GSWV
        G+ AL  +V+++ P +LFL +TKL +  M   K  L   +   +  +V      V  W   G   +P  S        + +L G S +G LI+G     +
Subjt:  GIPALGQVVQEKRPLVLFLSETKLSSSRMASAKRVLGLRTVFVLIAKV-----GVVVWLCCGVRLSPSASCHFR----ITTLMGGS-RGTLIIG--GSWV

Query:  SMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVG----------------------INHLDYHQ--------------SDHRPIELVLSPQPGCWRRSS
        S  EK GGRDKP  ++ A ++VID C L DLGF G                      +++L +H               SDH PI L L+ +    +   
Subjt:  SMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVG----------------------INHLDYHQ--------------SDHRPIELVLSPQPGCWRRSS

Query:  QRILRFDETWLKQAELQQLVRDSW
        +++ RF+  W+  A+ +Q+++++W
Subjt:  QRILRFDETWLKQAELQQLVRDSW

TrEMBL top hitse value%identityAlignment
A0A2N9GN35 Uncharacterized protein1.3e-1030.29Show/hide
Query:  VVQEKRPLVLFLSETKLSSSRMASAKRVLGLRTVFVLIAK---VGVVVWLCCGVRLSPSASCHFRITTLMG----------GSRGTLIIGG---SW----
        +V++K PLVLFLSETKL   RM S +   G    F++ ++    G+ +       +S S+  H+ I  +M           G  G+  + G   +W    
Subjt:  VVQEKRPLVLFLSETKLSSSRMASAKRVLGLRTVFVLIAK---VGVVVWLCCGVRLSPSASCHFRITTLMG----------GSRGTLIIGG---SW----

Query:  -------------------VSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVGINHLDYHQSDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAEL
                           +   EK G   +P S++  F+ VID+CG LDLGFV         SDHRP+ + L P  GC  RS +R  RF+E W      
Subjt:  -------------------VSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVGINHLDYHQSDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAEL

Query:  QQLVRDSW
        +  +R +W
Subjt:  QQLVRDSW

A0A2N9GXF5 Uncharacterized protein1.3e-1030.29Show/hide
Query:  VVQEKRPLVLFLSETKLSSSRMASAKRVLGLRTVFVLIAK---VGVVVWLCCGVRLSPSASCHFRITTLMG----------GSRGTLIIGG---SW----
        +V++K PLVLFLSETKL   RM S +   G    F++ ++    G+ +       +S S+  H+ I  +M           G  G+  + G   +W    
Subjt:  VVQEKRPLVLFLSETKLSSSRMASAKRVLGLRTVFVLIAK---VGVVVWLCCGVRLSPSASCHFRITTLMG----------GSRGTLIIGG---SW----

Query:  -------------------VSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVGINHLDYHQSDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAEL
                           +   EK G   +P S++  F+ VID+CG LDLGFV         SDHRP+ + L P  GC  RS +R  RF+E W      
Subjt:  -------------------VSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVGINHLDYHQSDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAEL

Query:  QQLVRDSW
        +  +R +W
Subjt:  QQLVRDSW

A0A2N9I8Z6 Reverse transcriptase domain-containing protein1.3e-1030.29Show/hide
Query:  VVQEKRPLVLFLSETKLSSSRMASAKRVLGLRTVFVLIAK---VGVVVWLCCGVRLSPSASCHFRITTLMG----------GSRGTLIIGG---SW----
        +V++K PLVLFLSETKL   RM S +   G    F++ ++    G+ +       +S S+  H+ I  +M           G  G+  + G   +W    
Subjt:  VVQEKRPLVLFLSETKLSSSRMASAKRVLGLRTVFVLIAK---VGVVVWLCCGVRLSPSASCHFRITTLMG----------GSRGTLIIGG---SW----

Query:  -------------------VSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVGINHLDYHQSDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAEL
                           +   EK G   +P S++  F+ VID+CG LDLGFV         SDHRP+ + L P  GC  RS +R  RF+E W      
Subjt:  -------------------VSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVGINHLDYHQSDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAEL

Query:  QQLVRDSW
        +  +R +W
Subjt:  QQLVRDSW

A0A2N9J510 Uncharacterized protein1.1e-0927.64Show/hide
Query:  ARDYEFDVLECSGFRVSPGIPALGQVVQEKRPLVLFLSETKLSSSRMASAKRVLGLRTVFVL--IAKV-GVVVWLCCGVRLSPSASCHFRITTLMGGSRG
        A + E  V    G   +P + A+  + + + P VLFLS+TK++S ++   KR LG    F L  + +  G+ ++   GV L    +  F +  L      
Subjt:  ARDYEFDVLECSGFRVSPGIPALGQVVQEKRPLVLFLSETKLSSSRMASAKRVLGLRTVFVL--IAKV-GVVVWLCCGVRLSPSASCHFRITTLMGGSRG

Query:  TLIIG--GSWVSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVGINHLDYHQSDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAELQQLVRDSW
         L++G   S     EK+GG  K       F++ +++ G +DLGF G+ HL    SDH PI L    +         +   F+  W+K     ++V  +W
Subjt:  TLIIG--GSWVSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVGINHLDYHQSDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAELQQLVRDSW

A0A6J5X9X9 Uncharacterized protein1.7e-1025.86Show/hide
Query:  VLECSGFRVSPGIPALGQVVQEKRPLVLFLSETKLSSSRMASAKRVLGL--------------------------------RTVFVLIAKVGVVVWLCCG
        +LEC GF     IP+     ++K+P ++F SETK +  +M   +R LG+                                R +  ++  V +  +   G
Subjt:  VLECSGFRVSPGIPALGQVVQEKRPLVLFLSETKLSSSRMASAKRVLGL--------------------------------RTVFVLIAKVGVVVWLCCG

Query:  VRLSPSAS-CHFR---ITTLMGGSRGTLIIGGSW---VSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVGI------NHLDYHQSDHRPIELVLSPQ
           +P    C      +  + G  +G  I+GG +   +  HE  G   +P+S++ AF+  ++ CGL  + F GI      +HL+Y  SDH P+ L L  +
Subjt:  VRLSPSAS-CHFR---ITTLMGGSRGTLIIGGSW---VSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVGI------NHLDYHQSDHRPIELVLSPQ

Query:  PGCWRRSSQRILRFDETWLKQAELQQLVRDSW
        P  W R  +R L F+E W      Q ++  +W
Subjt:  PGCWRRSSQRILRFDETWLKQAELQQLVRDSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCGGTGGCTGGGTCCCAGCCCCGCCCGGGATTATGAGTTTGATGTTTTGGAATGTTCGGGGTTTAGGGTCTCCCCGGGCATTCCAGCGCTTGGCCAAGTG
GTTCAAGAGAAAAGACCCCTGGTGCTCTTCCTGTCTGAAACAAAGCTGTCGTCAAGCAGGATGGCATCAGCGAAGCGAGTTCTGGGTTTGAGAACTGTTTTTGTG
TTGATAGCAAAGGTAGGAGTGGTGGTTTGGCTCTGTTGTGGAGTTCGTCTGTCTCCTTCAGCCTCTTGTCATTTTCGAATAACCACATTGATGGGTGGATCACGT
GGGACGCTTATCATTGGCGGCTCATGGGTTTCTATGCATGAGAAGGAGGGTGGCAGAGATAAACCCCTCTCAGAGCTAGCGGCCTTTCAGAATGTGATTGACTCA
TGTGGGCTTCTTGATTTGGGATTTGTGGGGATTAACCATCTTGATTATCATCAGTCCGATCACCGACCGATTGAGCTAGTTCTCTCTCCGCAGCCTGGTTGTTGG
AGACGCTCGAGTCAGCGAATCTTACGGTTTGACGAGACTTGGCTGAAGCAAGCAGAGCTGCAGCAGCTGGTCAGGGACTCATGGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCGGTGGCTGGGTCCCAGCCCCGCCCGGGATTATGAGTTTGATGTTTTGGAATGTTCGGGGTTTAGGGTCTCCCCGGGCATTCCAGCGCTTGGCCAAGTG
GTTCAAGAGAAAAGACCCCTGGTGCTCTTCCTGTCTGAAACAAAGCTGTCGTCAAGCAGGATGGCATCAGCGAAGCGAGTTCTGGGTTTGAGAACTGTTTTTGTG
TTGATAGCAAAGGTAGGAGTGGTGGTTTGGCTCTGTTGTGGAGTTCGTCTGTCTCCTTCAGCCTCTTGTCATTTTCGAATAACCACATTGATGGGTGGATCACGT
GGGACGCTTATCATTGGCGGCTCATGGGTTTCTATGCATGAGAAGGAGGGTGGCAGAGATAAACCCCTCTCAGAGCTAGCGGCCTTTCAGAATGTGATTGACTCA
TGTGGGCTTCTTGATTTGGGATTTGTGGGGATTAACCATCTTGATTATCATCAGTCCGATCACCGACCGATTGAGCTAGTTCTCTCTCCGCAGCCTGGTTGTTGG
AGACGCTCGAGTCAGCGAATCTTACGGTTTGACGAGACTTGGCTGAAGCAAGCAGAGCTGCAGCAGCTGGTCAGGGACTCATGGGGTTGA
Protein sequenceShow/hide protein sequence
MWRWLGPSPARDYEFDVLECSGFRVSPGIPALGQVVQEKRPLVLFLSETKLSSSRMASAKRVLGLRTVFVLIAKVGVVVWLCCGVRLSPSASCHFRITTLMGGSR
GTLIIGGSWVSMHEKEGGRDKPLSELAAFQNVIDSCGLLDLGFVGINHLDYHQSDHRPIELVLSPQPGCWRRSSQRILRFDETWLKQAELQQLVRDSWG