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Lag0011933 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011933
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box protein CPR30-like
Genome locationchr1:35103235..35103597
RNA-Seq ExpressionLag0011933
SyntenyLag0011933
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596950.1 F-box protein CPR1, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1859.78Show/hide
Query:  MFDIWKMEND-DEVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLT-RDPARAICATFIVQSLFPVLGEANNI
        MFDIWKME D   VSW K+FTI P  GI+KPL FVSS EL MEANEG+V+L+N+ TQ+ +D+P+    PA  I A   VQSLF V+G  NNI
Subjt:  MFDIWKMEND-DEVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLT-RDPARAICATFIVQSLFPVLGEANNI

XP_022941026.1 F-box/kelch-repeat protein At3g17530-like [Cucurbita moschata]6.6e-1757.14Show/hide
Query:  FDIWKMEND-DEVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLT-RDPARAICATFIVQSLFPVLGEANNI
        FDIWKME D   VSW K+FTI P  GI+KPL FVSS EL MEA+EG+V+L+N+ TQ+ +D+P+    PA  I A   +QSLF V+G  NNI
Subjt:  FDIWKMEND-DEVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLT-RDPARAICATFIVQSLFPVLGEANNI

XP_022983805.1 F-box protein CPR1-like [Cucurbita maxima]5.1e-1757.61Show/hide
Query:  FDIWKMENDD--EVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAICATFIVQSLFPVLGEANNIK
        FDIW ME D+   VSW KL TIGP+ GI+KPLVFVSS EL MEANEG+++LYN + QQ +++P+   PAR   AT  V+SL  V G  NN+K
Subjt:  FDIWKMENDD--EVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAICATFIVQSLFPVLGEANNIK

XP_023526117.1 F-box protein CPR1-like [Cucurbita pepo subsp. pepo]3.0e-1756.52Show/hide
Query:  FDIWKMENDD--EVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAICATFIVQSLFPVLGEANNIK
        FDIW++  D+   VSW KL TIGP+ GI+KPLVFVSS EL MEANEG+++LYN +TQQ++++P+   PAR   AT  V+SL  V G  NN+K
Subjt:  FDIWKMENDD--EVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAICATFIVQSLFPVLGEANNIK

XP_038906036.1 F-box protein CPR1-like [Benincasa hispida]6.0e-1861.63Show/hide
Query:  FDIWKMENDDE--VSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAICATFIVQSLFPVLG
        FDIW+ME D+   VSW KL TIGPVSGI+KPL+FVSS EL MEA+EG+VILYN++TQQ ++VP+   PAR    T  V+SL  V G
Subjt:  FDIWKMENDDE--VSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAICATFIVQSLFPVLG

TrEMBL top hitse value%identityAlignment
A0A6J1F3M5 F-box/kelch-repeat protein At3g23880-like2.7e-1658.43Show/hide
Query:  FDIWKMENDDE--VSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAICATFIVQSLFPVLGEAN
        FD+W MEND+   VSW KL TIGP+ GI+KPLVFV S EL MEANEG+VILYN +TQQF  VP+         AT  V+SL  V G  N
Subjt:  FDIWKMENDDE--VSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAICATFIVQSLFPVLGEAN

A0A6J1F6B1 F-box protein CPR30-like7.2e-1756.52Show/hide
Query:  FDIWKMENDD--EVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAICATFIVQSLFPVLGEANNIK
        FDIW ME D+   VSW KL  IGP+ GI+KPLVFVS  EL MEANEG+++LYN +TQQ +++P+   PAR   AT  V+SL  V G  NN+K
Subjt:  FDIWKMENDD--EVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAICATFIVQSLFPVLGEANNIK

A0A6J1FK05 F-box/kelch-repeat protein At3g17530-like3.2e-1757.14Show/hide
Query:  FDIWKMEND-DEVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLT-RDPARAICATFIVQSLFPVLGEANNI
        FDIWKME D   VSW K+FTI P  GI+KPL FVSS EL MEA+EG+V+L+N+ TQ+ +D+P+    PA  I A   +QSLF V+G  NNI
Subjt:  FDIWKMEND-DEVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLT-RDPARAICATFIVQSLFPVLGEANNI

A0A6J1G4T9 F-box protein CPR30-like6.1e-1651.09Show/hide
Query:  FDIWKMENDD--EVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAIC-ATFIVQSLFPVLGEANNI
        FD+W+M+ D+   +SW  L TIGP+SGI KPL+FVSS E+ ME NEG+V+LYN+KTQ    VPL     R  C ATF+ ++L  V+G  N++
Subjt:  FDIWKMENDD--EVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAIC-ATFIVQSLFPVLGEANNI

A0A6J1J6Y5 F-box protein CPR1-like2.5e-1757.61Show/hide
Query:  FDIWKMENDD--EVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAICATFIVQSLFPVLGEANNIK
        FDIW ME D+   VSW KL TIGP+ GI+KPLVFVSS EL MEANEG+++LYN + QQ +++P+   PAR   AT  V+SL  V G  NN+K
Subjt:  FDIWKMENDD--EVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAICATFIVQSLFPVLGEANNIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGACATTTGGAAGATGGAGAATGATGATGAGGTTTCATGGGTAAAGCTATTCACGATTGGCCCTGTTTCTGGAATTAAGAAGCCACTCGTATTTGTGAGCTCTGT
TGAACTTTTCATGGAGGCCAATGAAGGAAAGGTTATTTTATACAATATGAAGACCCAACAGTTCCAGGATGTTCCATTGACAAGGGATCCGGCCAGGGCCATCTGTGCTA
CTTTTATCGTCCAGAGTTTGTTCCCTGTGTTAGGAGAAGCCAACAACATCAAGGCGTCAAACTCTGTTTTCTGTGATGGGAGGAGGAAATTGAACGATTCTCAACATTTA
GATGGTGGTATAAATTCCAATTTTCATTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGACATTTGGAAGATGGAGAATGATGATGAGGTTTCATGGGTAAAGCTATTCACGATTGGCCCTGTTTCTGGAATTAAGAAGCCACTCGTATTTGTGAGCTCTGT
TGAACTTTTCATGGAGGCCAATGAAGGAAAGGTTATTTTATACAATATGAAGACCCAACAGTTCCAGGATGTTCCATTGACAAGGGATCCGGCCAGGGCCATCTGTGCTA
CTTTTATCGTCCAGAGTTTGTTCCCTGTGTTAGGAGAAGCCAACAACATCAAGGCGTCAAACTCTGTTTTCTGTGATGGGAGGAGGAAATTGAACGATTCTCAACATTTA
GATGGTGGTATAAATTCCAATTTTCATTCTTGA
Protein sequenceShow/hide protein sequence
MFDIWKMENDDEVSWVKLFTIGPVSGIKKPLVFVSSVELFMEANEGKVILYNMKTQQFQDVPLTRDPARAICATFIVQSLFPVLGEANNIKASNSVFCDGRRKLNDSQHL
DGGINSNFHS