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Lag0011962 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011962
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr1:35555560..35555901
RNA-Seq ExpressionLag0011962
SyntenyLag0011962
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150035.1 uncharacterized protein LOC111018307 [Momordica charantia]8.7e-1142.34Show/hide
Query:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKRSKREHKRH
        +G R + +P   LLT KQ+  ESL DY+ RFNEE L V+     V L+A  + + DE L  S GK  P T++E +S+ QKYMSA E   SKR      + 
Subjt:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKRSKREHKRH

Query:  SSVDQDRMKDK
        S  +++R  DK
Subjt:  SSVDQDRMKDK

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]2.2e-1443.36Show/hide
Query:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKRSKREHKRH
        +G R + KP   LLT KQ+  ESL++Y+ RFNEE L V+   + V L+A  +G++DERL+ S GK  P T+ E +S+ QKYMSA EL+   R     + +
Subjt:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKRSKREHKRH

Query:  SSVDQDRMKDKRH
         S  ++R  +KRH
Subjt:  SSVDQDRMKDKRH

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]6.1e-1244.04Show/hide
Query:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKR----SKRE
        +G R + +P   LLT KQ+  ESLRDY+ RFNEE L V+   + V L+A  +G+ DE L  S GK  P T++E +S+ Q+YMSA E   SKR     + +
Subjt:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKR----SKRE

Query:  HKRHSSVDQ
         KR  S D+
Subjt:  HKRHSSVDQ

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]8.7e-1141.28Show/hide
Query:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKR----SKRE
        +G R + +P   LLT KQ+  ESL DY+ RFN+E L ++   + V L+A  +G+ DE L  S GK  P T++E +S+ Q+YMSA E   SKR     + +
Subjt:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKR----SKRE

Query:  HKRHSSVDQ
         KR  S D+
Subjt:  HKRHSSVDQ

XP_024047974.1 uncharacterized protein LOC112101548 [Citrus clementina]1.8e-1142.99Show/hide
Query:  AREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSK--RSKREHKRH
        AR++ KP   LLT KQ  GESLR+YI R+N E   V  Y +GV L  +  GL+  RL  S+ K+ P TY+E +S+ +KY +A+E  +SK  R K E  ++
Subjt:  AREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSK--RSKREHKRH

Query:  SSVDQDR
            +DR
Subjt:  SSVDQDR

TrEMBL top hitse value%identityAlignment
A0A6J1D7D2 uncharacterized protein LOC1110183074.2e-1142.34Show/hide
Query:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKRSKREHKRH
        +G R + +P   LLT KQ+  ESL DY+ RFNEE L V+     V L+A  + + DE L  S GK  P T++E +S+ QKYMSA E   SKR      + 
Subjt:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKRSKREHKRH

Query:  SSVDQDRMKDK
        S  +++R  DK
Subjt:  SSVDQDRMKDK

A0A6J1DWY0 uncharacterized protein LOC1110252932.9e-1244.04Show/hide
Query:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKR----SKRE
        +G R + +P   LLT KQ+  ESLRDY+ RFNEE L V+   + V L+A  +G+ DE L  S GK  P T++E +S+ Q+YMSA E   SKR     + +
Subjt:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKR----SKRE

Query:  HKRHSSVDQ
         KR  S D+
Subjt:  HKRHSSVDQ

A0A6J1DYL6 uncharacterized protein LOC1110257854.2e-1141.28Show/hide
Query:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKR----SKRE
        +G R + +P   LLT KQ+  ESL DY+ RFN+E L ++   + V L+A  +G+ DE L  S GK  P T++E +S+ Q+YMSA E   SKR     + +
Subjt:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKR----SKRE

Query:  HKRHSSVDQ
         KR  S D+
Subjt:  HKRHSSVDQ

A0A6J1DZ49 uncharacterized protein LOC1110248511.1e-1443.36Show/hide
Query:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKRSKREHKRH
        +G R + KP   LLT KQ+  ESL++Y+ RFNEE L V+   + V L+A  +G++DERL+ S GK  P T+ E +S+ QKYMSA EL+   R     + +
Subjt:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKRSKREHKRH

Query:  SSVDQDRMKDKRH
         S  ++R  +KRH
Subjt:  SSVDQDRMKDKRH

A0A6J1E1E7 uncharacterized protein LOC1110255489.4e-1141.28Show/hide
Query:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKR----SKRE
        +G R + +P   LLT KQ+  ESL DY+ RFNEE L ++   + V L+A  +G+ DE L  S  K  P T++E +S+ Q+YMSA E   SKR     + +
Subjt:  MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKR----SKRE

Query:  HKRHSSVDQ
         KR  S D+
Subjt:  HKRHSSVDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTAGAGAACAACGCAAGCCTCACATCAACCTCTTAACTGCCAAACAACAACCAGGTGAGAGCTTGCGTGATTATATAACACGTTTTAACGAGGAAGCA
CTGCATGTTAAGAGATACATTGAGGGAGTAGTCCTAGTAGCCATCACAACTGGACTAGAAGATGAGAGACTACTCAATTCAATAGGTAAGAGCCAACCTCGAACC
TATGCTGAGTTCGTTTCCAAGACACAGAAGTATATGAGCGCAGATGAGCTATTGAAATCAAAGAGGTCAAAACGAGAGCACAAGAGACATTCTTCGGTCGATCAG
GACAGAATGAAAGATAAGAGACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTAGAGAACAACGCAAGCCTCACATCAACCTCTTAACTGCCAAACAACAACCAGGTGAGAGCTTGCGTGATTATATAACACGTTTTAACGAGGAAGCA
CTGCATGTTAAGAGATACATTGAGGGAGTAGTCCTAGTAGCCATCACAACTGGACTAGAAGATGAGAGACTACTCAATTCAATAGGTAAGAGCCAACCTCGAACC
TATGCTGAGTTCGTTTCCAAGACACAGAAGTATATGAGCGCAGATGAGCTATTGAAATCAAAGAGGTCAAAACGAGAGCACAAGAGACATTCTTCGGTCGATCAG
GACAGAATGAAAGATAAGAGACATTAA
Protein sequenceShow/hide protein sequence
MGAREQRKPHINLLTAKQQPGESLRDYITRFNEEALHVKRYIEGVVLVAITTGLEDERLLNSIGKSQPRTYAEFVSKTQKYMSADELLKSKRSKREHKRHSSVDQ
DRMKDKRH