; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0011977 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0011977
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr1:35843431..35845912
RNA-Seq ExpressionLag0011977
SyntenyLag0011977
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048346.1 protein Ycf2-like [Cucumis melo var. makuwa]6.6e-2461.29Show/hide
Query:  MVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISM-GGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLADTQPKWKTSKKE
        MVDD+++F+G  WGR+AF+LLV+FM + + SKG TGIS+ GGFIFPILAWAYEV+P L +P N FA ++++ V RI+NW ADTQPKWK  K++
Subjt:  MVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISM-GGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLADTQPKWKTSKKE

KAA0051382.1 protein Ycf2-like [Cucumis melo var. makuwa]4.3e-3159.82Show/hide
Query:  IKSFL-PDTDTVHVDMNHVIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISMGGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLA
        ++SFL P  + + VD +H+IMVDD+++F+GYPWGR+AF+LLV+FM + + SKG TGIS+ GFIF ILAWAYEV P LS+P N FA ++ + VPRI+NW A
Subjt:  IKSFL-PDTDTVHVDMNHVIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISMGGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLA

Query:  DTQPKWKTSKKE
        DTQPKWK  K++
Subjt:  DTQPKWKTSKKE

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]1.2e-3362.83Show/hide
Query:  IKSFL-PDTDTVHVDMNHVIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISM-GGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWL
        ++SFL P  + + VD +H+IMVDD+++F+GYPWGR+AF+LLV+FM +A+ SKG TGISM GGFIFPILAWAYEV+P LS+P N FA ++++ VPRI+NW 
Subjt:  IKSFL-PDTDTVHVDMNHVIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISM-GGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWL

Query:  ADTQPKWKTSKKE
        ADTQPKWK  K++
Subjt:  ADTQPKWKTSKKE

TYK21258.1 protein Ycf2-like [Cucumis melo var. makuwa]1.5e-2841.75Show/hide
Query:  EDRKGKESKKKVGVKKEHVTKKRVAKSGSKKINKRKSTANETMEDDLYLMSKTKRCQALKI--NLQTKIDVIERIKS---------FLPDTDTVHVDMNH
        E +K + + +K    K  V++K V +   KK    +      ++   +   KT   Q L +  N+ T     ++IK           +P  + + VD ++
Subjt:  EDRKGKESKKKVGVKKEHVTKKRVAKSGSKKINKRKSTANETMEDDLYLMSKTKRCQALKI--NLQTKIDVIERIKS---------FLPDTDTVHVDMNH

Query:  VIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISMGGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLADTQPKWKTSKKE
        +IMVDD+++F+GYPWGR+AF+LLV+FM +A+ SKG TGIS+ GFIFPILAWAYEV+P LS+P N FA ++++ VPRI+NW AD QPKWK  K++
Subjt:  VIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISMGGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLADTQPKWKTSKKE

TYK23840.1 protein Ycf2-like [Cucumis melo var. makuwa]4.3e-3159.82Show/hide
Query:  IKSFL-PDTDTVHVDMNHVIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISMGGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLA
        ++SFL P  + + VD +H+IMVDD+++F+GYPWGR+AF+LLV+FM + + SKG TGIS+ GFIF ILAWAYEV P LS+P N FA ++ + VPRI+NW A
Subjt:  IKSFL-PDTDTVHVDMNHVIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISMGGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLA

Query:  DTQPKWKTSKKE
        DTQPKWK  K++
Subjt:  DTQPKWKTSKKE

TrEMBL top hitse value%identityAlignment
A0A5A7U290 Protein Ycf2-like3.2e-2461.29Show/hide
Query:  MVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISM-GGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLADTQPKWKTSKKE
        MVDD+++F+G  WGR+AF+LLV+FM + + SKG TGIS+ GGFIFPILAWAYEV+P L +P N FA ++++ V RI+NW ADTQPKWK  K++
Subjt:  MVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISM-GGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLADTQPKWKTSKKE

A0A5A7U6E1 Protein Ycf2-like2.1e-3159.82Show/hide
Query:  IKSFL-PDTDTVHVDMNHVIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISMGGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLA
        ++SFL P  + + VD +H+IMVDD+++F+GYPWGR+AF+LLV+FM + + SKG TGIS+ GFIF ILAWAYEV P LS+P N FA ++ + VPRI+NW A
Subjt:  IKSFL-PDTDTVHVDMNHVIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISMGGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLA

Query:  DTQPKWKTSKKE
        DTQPKWK  K++
Subjt:  DTQPKWKTSKKE

A0A5D3CEX9 Protein Ycf2-like5.9e-3462.83Show/hide
Query:  IKSFL-PDTDTVHVDMNHVIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISM-GGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWL
        ++SFL P  + + VD +H+IMVDD+++F+GYPWGR+AF+LLV+FM +A+ SKG TGISM GGFIFPILAWAYEV+P LS+P N FA ++++ VPRI+NW 
Subjt:  IKSFL-PDTDTVHVDMNHVIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISM-GGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWL

Query:  ADTQPKWKTSKKE
        ADTQPKWK  K++
Subjt:  ADTQPKWKTSKKE

A0A5D3DCN3 Protein Ycf2-like7.4e-2941.75Show/hide
Query:  EDRKGKESKKKVGVKKEHVTKKRVAKSGSKKINKRKSTANETMEDDLYLMSKTKRCQALKI--NLQTKIDVIERIKS---------FLPDTDTVHVDMNH
        E +K + + +K    K  V++K V +   KK    +      ++   +   KT   Q L +  N+ T     ++IK           +P  + + VD ++
Subjt:  EDRKGKESKKKVGVKKEHVTKKRVAKSGSKKINKRKSTANETMEDDLYLMSKTKRCQALKI--NLQTKIDVIERIKS---------FLPDTDTVHVDMNH

Query:  VIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISMGGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLADTQPKWKTSKKE
        +IMVDD+++F+GYPWGR+AF+LLV+FM +A+ SKG TGIS+ GFIFPILAWAYEV+P LS+P N FA ++++ VPRI+NW AD QPKWK  K++
Subjt:  VIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISMGGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLADTQPKWKTSKKE

A0A5D3DKA6 Protein Ycf2-like2.1e-3159.82Show/hide
Query:  IKSFL-PDTDTVHVDMNHVIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISMGGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLA
        ++SFL P  + + VD +H+IMVDD+++F+GYPWGR+AF+LLV+FM + + SKG TGIS+ GFIF ILAWAYEV P LS+P N FA ++ + VPRI+NW A
Subjt:  IKSFL-PDTDTVHVDMNHVIMVDDEDLFNGYPWGRLAFDLLVEFMQKALQSKGATGISMGGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLA

Query:  DTQPKWKTSKKE
        DTQPKWK  K++
Subjt:  DTQPKWKTSKKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAAGAACTGCTCGCCGTCGGTCGAGAAAAACGGAAGAAAAAAAACCCACTCACTAGAACAAATGCTCGTCGCCGGTCGCCGTTGGATAGAATGAGTCGCAGTCC
GTTAGCTCGCCGTCGAGGAGGGATGAAGCTTGCCGTCGATGAGGGAGGAGCTGCCGTCGGTGAGGGAAGTCTTTGTGGGTTTTGCTTTCGTTTTCGAGCAGAGAGAAGTC
AAAGACTTTTGGCCGCGGGGATAACTTCAGGGAAAAAGCCAAAACATATAGGGCTAATTACATTAAACAGTGACGGAGAGGAGTCAACTGAGACAATGACAAAAGGATCA
AAATCTAAAAAATGGGAGCAAGCAAAAGAAAAGACAAGGCAAAAAATTAACAAAAAGAGACAAAGGGAAGAGGAAAATGTTGAACCTAAGTCCACCAAGAAGAAAAGGGG
GAAGAGCACAAAAAAGGATGAAAATAAAACAAAGTGTGAAAAGAAAAAGGAGAAGTCCATGGAGGAAGTAGAATCAACCGAGGAAGAGATTGATAAACACTCTGATGATG
AGGAAAAGGTGGAATCAAAAGAAGAAACCATCCATTCTGAAGAAGGAGAAGAAAACACAGAATATGATGAGGGAGAACAAACAGGGGATGATAAAGAATACCAAACCGAA
TCAGAATCAAACCATGAAGATAGAAAAGGAAAAGAATCGAAGAAAAAGGTGGGTGTTAAGAAAGAACACGTGACAAAGAAGCGGGTGGCTAAATCCGGATCTAAAAAGAT
CAACAAAAGGAAAAGTACTGCCAACGAGACAATGGAGGATGATCTGTATCTGATGAGTAAAACAAAGAGATGCCAAGCTTTAAAAATCAACCTGCAAACCAAGATAGATG
TTATTGAGCGAATAAAGAGCTTTTTACCTGATACAGACACAGTCCATGTAGACATGAACCATGTAATTATGGTTGATGATGAAGATCTATTCAATGGGTATCCGTGGGGA
AGGTTAGCATTTGACCTGTTGGTTGAGTTCATGCAGAAAGCATTACAGAGCAAGGGGGCCACAGGAATATCTATGGGAGGCTTCATATTTCCCATATTAGCATGGGCTTA
TGAAGTTATGCCTATACTAAGCAGCCCACAGAATTGTTTTGCAAGGAAAATGACAGATACAGTTCCAAGGATTGTCAATTGGTTGGCAGACACACAACCGAAATGGAAGA
CCTCGAAAAAAGAGTTTTTGAGTCAAGAGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAAGAACTGCTCGCCGTCGGTCGAGAAAAACGGAAGAAAAAAAACCCACTCACTAGAACAAATGCTCGTCGCCGGTCGCCGTTGGATAGAATGAGTCGCAGTCC
GTTAGCTCGCCGTCGAGGAGGGATGAAGCTTGCCGTCGATGAGGGAGGAGCTGCCGTCGGTGAGGGAAGTCTTTGTGGGTTTTGCTTTCGTTTTCGAGCAGAGAGAAGTC
AAAGACTTTTGGCCGCGGGGATAACTTCAGGGAAAAAGCCAAAACATATAGGGCTAATTACATTAAACAGTGACGGAGAGGAGTCAACTGAGACAATGACAAAAGGATCA
AAATCTAAAAAATGGGAGCAAGCAAAAGAAAAGACAAGGCAAAAAATTAACAAAAAGAGACAAAGGGAAGAGGAAAATGTTGAACCTAAGTCCACCAAGAAGAAAAGGGG
GAAGAGCACAAAAAAGGATGAAAATAAAACAAAGTGTGAAAAGAAAAAGGAGAAGTCCATGGAGGAAGTAGAATCAACCGAGGAAGAGATTGATAAACACTCTGATGATG
AGGAAAAGGTGGAATCAAAAGAAGAAACCATCCATTCTGAAGAAGGAGAAGAAAACACAGAATATGATGAGGGAGAACAAACAGGGGATGATAAAGAATACCAAACCGAA
TCAGAATCAAACCATGAAGATAGAAAAGGAAAAGAATCGAAGAAAAAGGTGGGTGTTAAGAAAGAACACGTGACAAAGAAGCGGGTGGCTAAATCCGGATCTAAAAAGAT
CAACAAAAGGAAAAGTACTGCCAACGAGACAATGGAGGATGATCTGTATCTGATGAGTAAAACAAAGAGATGCCAAGCTTTAAAAATCAACCTGCAAACCAAGATAGATG
TTATTGAGCGAATAAAGAGCTTTTTACCTGATACAGACACAGTCCATGTAGACATGAACCATGTAATTATGGTTGATGATGAAGATCTATTCAATGGGTATCCGTGGGGA
AGGTTAGCATTTGACCTGTTGGTTGAGTTCATGCAGAAAGCATTACAGAGCAAGGGGGCCACAGGAATATCTATGGGAGGCTTCATATTTCCCATATTAGCATGGGCTTA
TGAAGTTATGCCTATACTAAGCAGCCCACAGAATTGTTTTGCAAGGAAAATGACAGATACAGTTCCAAGGATTGTCAATTGGTTGGCAGACACACAACCGAAATGGAAGA
CCTCGAAAAAAGAGTTTTTGAGTCAAGAGAGGTAA
Protein sequenceShow/hide protein sequence
MMEELLAVGREKRKKKNPLTRTNARRRSPLDRMSRSPLARRRGGMKLAVDEGGAAVGEGSLCGFCFRFRAERSQRLLAAGITSGKKPKHIGLITLNSDGEESTETMTKGS
KSKKWEQAKEKTRQKINKKRQREEENVEPKSTKKKRGKSTKKDENKTKCEKKKEKSMEEVESTEEEIDKHSDDEEKVESKEETIHSEEGEENTEYDEGEQTGDDKEYQTE
SESNHEDRKGKESKKKVGVKKEHVTKKRVAKSGSKKINKRKSTANETMEDDLYLMSKTKRCQALKINLQTKIDVIERIKSFLPDTDTVHVDMNHVIMVDDEDLFNGYPWG
RLAFDLLVEFMQKALQSKGATGISMGGFIFPILAWAYEVMPILSSPQNCFARKMTDTVPRIVNWLADTQPKWKTSKKEFLSQER