; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012003 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012003
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr1:36233573..36234211
RNA-Seq ExpressionLag0012003
SyntenyLag0012003
Gene Ontology termsNA
InterPro domainsIPR019557 - Aminotransferase-like, plant mobile domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]3.7e-4748.29Show/hide
Query:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ
        D+W   G+ IKG FY+E +P  KEL  +   + +  P +C+YLF AYY I   QR           Q+ + SWI FW+     Y+KP  RK KKAS+ + 
Subjt:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ

Query:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF
        T NPDG+ I+ H+WS +E  LF  LG++D+LKD+TYL AFLSCWLCLF+FP + + LR  VF+ AS MA   ++SL +PVLANIYHGLG I  AS   G 
Subjt:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF

Query:  SNFFF
         +F F
Subjt:  SNFFF

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]1.3e-4749.27Show/hide
Query:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ
        D+W   G+ IKG FY+E +P  KEL  +   + +  P +C+Y F AYY I   QR           Q+ + SWI FW+     Y+KP  RK KKAS  + 
Subjt:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ

Query:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF
        T NPDG+ I+  +WS +E  LF  LG+ D+LKD+TYL AFLSCWLCLFVFP + + LRL VF+VAS MA G ++SL +PVLANIYHGLG I  AS   G 
Subjt:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF

Query:  SNFFF
         +F F
Subjt:  SNFFF

KAA0057575.1 hypothetical protein E6C27_scaffold497G00470 [Cucumis melo var. makuwa]4.9e-4748.78Show/hide
Query:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ
        D+W   G+ IKG FY+E +P  KEL  +   + +  P +C+YLF AYY I   QR           Q+ + SWI FW+     Y+KP  RK KKAS  + 
Subjt:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ

Query:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF
        T NPDG+ I+  +WS +E  LF  LG+ D+LKD+TYL AFLSCWLCLFVFP + + LR  VF+VAS M  G ++SL +PVLANIYHGLG I  AS   G 
Subjt:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF

Query:  SNFFF
         +F F
Subjt:  SNFFF

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]7.0e-4647.8Show/hide
Query:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ
        D+W   G+ IKG FY+E +P  KEL  +   + +  P +C+YLF AYY I   QR           Q+ + SWI FW+     Y+KP  RK K AS  + 
Subjt:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ

Query:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF
        T NPDG+ I+  +WS +E  LF  LG++D+LKD+TYL AFLSCWLCLFVFP + + LR  VF+ AS M  G ++SL +PVLANIYHGLG I  AS   G 
Subjt:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF

Query:  SNFFF
         +F F
Subjt:  SNFFF

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]2.2e-6361.11Show/hide
Query:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQRGRFQILVKSWIFFWF-KEDSKYEKPPPRKPKKASYPRQTHNPDGA
        D+W L G+SIKGRFY+E +PC ++L+GSPD     CP+SCE+LFAAYY I SQ+    QI V  WI FW  + + KY KPPPRKPKK S PR THNPDG 
Subjt:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQRGRFQILVKSWIFFWF-KEDSKYEKPPPRKPKKASYPRQTHNPDGA

Query:  PIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGFSNFFF
        PI+R DWS+ E+ +F  L V D+ +DKTYL AFLSCWLC+FVFPD++ SLR  VFKVAS MAEGY FSL +PVLANIY GL Q+H ++   G+SN  F
Subjt:  PIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGFSNFFF

TrEMBL top hitse value%identityAlignment
A0A5A7SHN8 PMD domain-containing protein1.8e-4748.29Show/hide
Query:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ
        D+W   G+ IKG FY+E +P  KEL  +   + +  P +C+YLF AYY I   QR           Q+ + SWI FW+     Y+KP  RK KKAS+ + 
Subjt:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ

Query:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF
        T NPDG+ I+ H+WS +E  LF  LG++D+LKD+TYL AFLSCWLCLF+FP + + LR  VF+ AS MA   ++SL +PVLANIYHGLG I  AS   G 
Subjt:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF

Query:  SNFFF
         +F F
Subjt:  SNFFF

A0A5A7U8L3 PMD domain-containing protein9.9e-4649.23Show/hide
Query:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ
        D+W  EG+ IKG FY+E +P  KEL  +   + +  P +C+YLF AYY I   QR           Q+ + SWI FW+     Y+KP  RK K AS  + 
Subjt:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ

Query:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSAS
        T NPDG+ I+  +WS +E  LF  LG++D+LKD+TYL AFLSCWLCLFVFP + + LR  VF+ AS MA G ++SL +PVLANIYHGL  I  AS
Subjt:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSAS

A0A5A7UGW6 PMD domain-containing protein6.2e-4849.27Show/hide
Query:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ
        D+W   G+ IKG FY+E +P  KEL  +   + +  P +C+Y F AYY I   QR           Q+ + SWI FW+     Y+KP  RK KKAS  + 
Subjt:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ

Query:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF
        T NPDG+ I+  +WS +E  LF  LG+ D+LKD+TYL AFLSCWLCLFVFP + + LRL VF+VAS MA G ++SL +PVLANIYHGLG I  AS   G 
Subjt:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF

Query:  SNFFF
         +F F
Subjt:  SNFFF

A0A5A7UVI5 PMD domain-containing protein2.4e-4748.78Show/hide
Query:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ
        D+W   G+ IKG FY+E +P  KEL  +   + +  P +C+YLF AYY I   QR           Q+ + SWI FW+     Y+KP  RK KKAS  + 
Subjt:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ

Query:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF
        T NPDG+ I+  +WS +E  LF  LG+ D+LKD+TYL AFLSCWLCLFVFP + + LR  VF+VAS M  G ++SL +PVLANIYHGLG I  AS   G 
Subjt:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF

Query:  SNFFF
         +F F
Subjt:  SNFFF

A0A5A7VHW8 PMD domain-containing protein3.4e-4647.8Show/hide
Query:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ
        D+W   G+ IKG FY+E +P  KEL  +   + +  P +C+YLF AYY I   QR           Q+ + SWI FW+     Y+KP  RK K AS  + 
Subjt:  DMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQR--------GRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQ

Query:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF
        T NPDG+ I+  +WS +E  LF  LG++D+LKD+TYL AFLSCWLCLFVFP + + LR  VF+ AS M  G ++SL +PVLANIYHGLG I  AS   G 
Subjt:  THNPDGAPIKRHDWSEKEMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGF

Query:  SNFFF
         +F F
Subjt:  SNFFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50830.1 Aminotransferase-like, plant mobile domain family protein5.4e-0442.37Show/hide
Query:  VAFLSCWLCLFVFP-DQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSAS
        VAFL  WL LFVFP   R ++   VF +A  +A G   +L   +LA +Y  L +IH  S
Subjt:  VAFLSCWLCLFVFP-DQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGTGGAGATTAGAAGGTATTTCCATCAAAGGTAGGTTTTATGATGAAGTTGTTCCTTGCTGTAAAGAATTATTAGGTTCACCTGATCGAGAGGATGAGGGTTG
TCCAAAAAGTTGTGAGTATCTTTTTGCTGCGTACTATCACATTGCGTCTCAACAACGTGGTCGCTTTCAAATCCTTGTCAAATCGTGGATTTTTTTCTGGTTTAAAGAGG
ATTCGAAATATGAAAAACCTCCTCCCCGAAAGCCGAAGAAGGCTTCCTATCCACGTCAGACCCATAATCCAGATGGAGCTCCTATCAAACGTCATGACTGGTCTGAAAAA
GAAATGGATCTATTTTGCATGTTGGGCGTAGAAGATGAATTGAAAGATAAAACATACTTGGTTGCCTTTCTTTCTTGTTGGTTGTGCTTATTTGTATTTCCTGACCAACG
TGCTTCCCTTCGTCTAAGAGTTTTTAAAGTCGCTAGTTTTATGGCCGAAGGTTATGTTTTTAGCCTTGTCCTTCCTGTTTTGGCTAATATCTATCATGGACTAGGCCAGA
TTCACAGTGCATCTCCTTTTGCTGGATTTTCCAACTTTTTTTTTTGTTTTACAATACTGAAATCTCTGCATCTCCTTCTGCTGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACATGTGGAGATTAGAAGGTATTTCCATCAAAGGTAGGTTTTATGATGAAGTTGTTCCTTGCTGTAAAGAATTATTAGGTTCACCTGATCGAGAGGATGAGGGTTG
TCCAAAAAGTTGTGAGTATCTTTTTGCTGCGTACTATCACATTGCGTCTCAACAACGTGGTCGCTTTCAAATCCTTGTCAAATCGTGGATTTTTTTCTGGTTTAAAGAGG
ATTCGAAATATGAAAAACCTCCTCCCCGAAAGCCGAAGAAGGCTTCCTATCCACGTCAGACCCATAATCCAGATGGAGCTCCTATCAAACGTCATGACTGGTCTGAAAAA
GAAATGGATCTATTTTGCATGTTGGGCGTAGAAGATGAATTGAAAGATAAAACATACTTGGTTGCCTTTCTTTCTTGTTGGTTGTGCTTATTTGTATTTCCTGACCAACG
TGCTTCCCTTCGTCTAAGAGTTTTTAAAGTCGCTAGTTTTATGGCCGAAGGTTATGTTTTTAGCCTTGTCCTTCCTGTTTTGGCTAATATCTATCATGGACTAGGCCAGA
TTCACAGTGCATCTCCTTTTGCTGGATTTTCCAACTTTTTTTTTTGTTTTACAATACTGAAATCTCTGCATCTCCTTCTGCTGGGGTGA
Protein sequenceShow/hide protein sequence
MDMWRLEGISIKGRFYDEVVPCCKELLGSPDREDEGCPKSCEYLFAAYYHIASQQRGRFQILVKSWIFFWFKEDSKYEKPPPRKPKKASYPRQTHNPDGAPIKRHDWSEK
EMDLFCMLGVEDELKDKTYLVAFLSCWLCLFVFPDQRASLRLRVFKVASFMAEGYVFSLVLPVLANIYHGLGQIHSASPFAGFSNFFFCFTILKSLHLLLLG