; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012012 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012012
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPolynucleotidyl transferase, ribonuclease H-like superfamily protein
Genome locationchr1:36290149..36290901
RNA-Seq ExpressionLag0012012
SyntenyLag0012012
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3458125.1 reverse transcriptase [Gossypium australe]2.1e-1727.57Show/hide
Query:  PVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIK--DR--WIHLSRCREINLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCAWIL
        P +  CP C+ + E   H    C     +W     L + + Q H ++   DR  WI    C E  + L C G W IW  +N +L+ R +         I 
Subjt:  PVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIK--DR--WIHLSRCREINLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCAWIL

Query:  DYLADFRKANRVGNASPLSVEAFYELIAKGEDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGLHLARRLNVERVTI
         Y+++  +A RVGN  P  +E+ +++ ++G  +++  DA FD    KS  G+++RD++G ++   A       +P  A+  A L+   L   +++ RV I
Subjt:  DYLADFRKANRVGNASPLSVEAFYELIAKGEDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGLHLARRLNVERVTI

Query:  MSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHV
        M DS  +++  +   I  S I +I+ DI+  L ++  I F  +
Subjt:  MSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHV

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.1e-2027.16Show/hide
Query:  CPICKTSLETIEHALFLCKRARSVWKALIP-LKIGFQQRHMDIKDRWIHLSRCRE-INLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCAWILDYLADFR
        C IC    E+I HA F CKRAR +W+ L P L     + ++   + W  L+   E  +L+L  +  W IWND+N ++H + +  ++ +C W+  +L D  
Subjt:  CPICKTSLETIEHALFLCKRARSVWKALIP-LKIGFQQRHMDIKDRWIHLSRCRE-INLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCAWILDYLADFR

Query:  KANRVGNASPLSVEAFYELI-----AKGEDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGLHLARRLNVERVTIMS
           ++ N SP +      ++     +    + +NTDA        + FG ++RD    L+   +       +P+ A++  +L+GL  A   N   + + S
Subjt:  KANRVGNASPLSVEAFYELI-----AKGEDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGLHLARRLNVERVTIMS

Query:  DSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR
        DSL+ +Q+IR          + + +I  L   F  I+F H +R
Subjt:  DSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR

XP_030505068.1 uncharacterized protein LOC115720043 [Cannabis sativa]9.6e-1826.95Show/hide
Query:  LSRHHVPVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIKDRWIHLSRC-REINLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCA
        L   H+       IC    E+I HALF CKRAR VW+            HM + +  +HL+       L+      W+IWN++N  +H       DV   
Subjt:  LSRHHVPVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIKDRWIHLSRC-REINLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCA

Query:  WILDYLADFRKANRVGNASPLSVEAFYELIAKGED--------IIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGLHL
        + L YLA+F  A +    + L++      ++K           + +NTDA  D     S FG +L+   G+++  +A   Q C  P   +V A++  L  
Subjt:  WILDYLADFRKANRVGNASPLSVEAFYELIAKGED--------IIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGLHL

Query:  ARRLNVERVTIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR
         + L++    I +DS ++V  ++ S    S   S++ +I  L+ +F      HV R
Subjt:  ARRLNVERVTIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR

XP_030508858.1 uncharacterized protein LOC115723499 [Cannabis sativa]1.6e-1727.07Show/hide
Query:  LSRHHVPVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIKDRWIHLSRCREINLDL-----ICVGSWAIWNDKNHVLHNRPIPNID
        L R H+    +CP+CK   ETI HALFLC RA+ VW+ L  +K+ F+       + ++  +       D      IC   W+IW ++N   H++      
Subjt:  LSRHHVPVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIKDRWIHLSRCREINLDL-----ICVGSWAIWNDKNHVLHNRPIPNID

Query:  VRCAWILDYLADFR--KANRVGN---ASPLSVEAFYELIAKGED---------IIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAK
           A+  DYL  ++  +A  V N   A+ ++  A    +A   D           +NTDA  +  ++    G VLRD  G +    +++ + C      +
Subjt:  VRCAWILDYLADFR--KANRVGN---ASPLSVEAFYELIAKGED---------IIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAK

Query:  VAAVLKGLHLARRLNVERVTIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR
          A++  L     L +    I +DSL++VQ ++ +    S+  +I+ D+  L+ SF R    HV R
Subjt:  VAAVLKGLHLARRLNVERVTIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR

XP_030510848.1 uncharacterized protein LOC115725456 [Cannabis sativa]1.3e-1726.14Show/hide
Query:  LSRHHVPVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIKDRWIHLSRC-REINLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCA
        L   H+    FCP+C    ETI HALF CKR R  W+          Q H+ +K   IH+S     + L+      W++W ++N   H       ++   
Subjt:  LSRHHVPVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIKDRWIHLSRC-REINLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCA

Query:  WILDYLADFRKANRVGNA---------SPLSVEAFYE-------LIAKGEDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVA
          + YL DF  A    N          SP    A          L      + +NTDA  +   + + FG +LR+  G+ +  ++R    C  P   +  
Subjt:  WILDYLADFRKANRVGNA---------SPLSVEAFYE-------LIAKGEDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVA

Query:  AVLKGLHLARRLNVERVTIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR
        A+L  L   + L ++   I SDSL+L+  ++      S    ++ DI  L+ +F  +   HV R
Subjt:  AVLKGLHLARRLNVERVTIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR

TrEMBL top hitse value%identityAlignment
A0A6J1DX30 uncharacterized protein LOC1110248741.0e-2027.16Show/hide
Query:  CPICKTSLETIEHALFLCKRARSVWKALIP-LKIGFQQRHMDIKDRWIHLSRCRE-INLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCAWILDYLADFR
        C IC    E+I HA F CKRAR +W+ L P L     + ++   + W  L+   E  +L+L  +  W IWND+N ++H + +  ++ +C W+  +L D  
Subjt:  CPICKTSLETIEHALFLCKRARSVWKALIP-LKIGFQQRHMDIKDRWIHLSRCRE-INLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCAWILDYLADFR

Query:  KANRVGNASPLSVEAFYELI-----AKGEDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGLHLARRLNVERVTIMS
           ++ N SP +      ++     +    + +NTDA        + FG ++RD    L+   +       +P+ A++  +L+GL  A   N   + + S
Subjt:  KANRVGNASPLSVEAFYELI-----AKGEDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGLHLARRLNVERVTIMS

Query:  DSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR
        DSL+ +Q+IR          + + +I  L   F  I+F H +R
Subjt:  DSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR

A0A803NM27 Uncharacterized protein6.5e-2028.74Show/hide
Query:  CPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRH-----MDIKDRWIHLSRC-REINLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCAWILDYL
        C +C  + E++ HA+F CK AR VWK       GF   +     M I+D    +S C  +  L++I    W+IW+D+N+VLH +      V  A    +L
Subjt:  CPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRH-----MDIKDRWIHLSRC-REINLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCAWILDYL

Query:  ADFRKANRV----GNASPLSVEAFYELIAKGEDII-MNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGLHLARRLNVERV
        + F+ A ++    G A   +  A         +++ +N DA FD T ++  FG ++RD  G +   ++     C  P   +   +   L  AR+LN +  
Subjt:  ADFRKANRV----GNASPLSVEAFYELIAKGEDII-MNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGLHLARRLNVERV

Query:  TIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR
         + +DSL+LV  +R S    SS   +++D+ T L     +   HV R
Subjt:  TIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR

A0A803PK99 Uncharacterized protein4.5e-2128.52Show/hide
Query:  NLSRHHVPVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIKDRWIHLSRC-REINLDLICVGSWAIWNDKNHVLHNRPIPNIDVRC
        N  + H+P    CP+C+ + ETI HALFLCKRA+ VW+              + KD +   S    + +L+      W IW ++N   H       +V  
Subjt:  NLSRHHVPVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIKDRWIHLSRC-REINLDLICVGSWAIWNDKNHVLHNRPIPNIDVRC

Query:  AWILDYLADFRKANRVGNASPLSVEAFYELI---------AKGEDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGL
           L YL +++ A R    S LS E     +              + +NTDA  DV NR S FG +LRD  G+++  ++R    C  P   +  A+   L
Subjt:  AWILDYLADFRKANRVGNASPLSVEAFYELI---------AKGEDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGL

Query:  HLARRLNVERVTIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHV
           + +N+    I +DSL++V+ +       S   S++ DI  L+ +F  +   HV
Subjt:  HLARRLNVERVTIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHV

A0A803PM29 Uncharacterized protein3.2e-1927.52Show/hide
Query:  LSRHHVPVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIKDRWIHLSRC-REINLDLICVGSWAIWNDKNHVLH-NRPIPNIDVRC
        L + H+     C +C+ + E+I HALFLCKRA+ VW+              + KD +   S    +  L+      W+IW ++N   H  +P PN +V  
Subjt:  LSRHHVPVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIKDRWIHLSRC-REINLDLICVGSWAIWNDKNHVLH-NRPIPNIDVRC

Query:  AWILDYLADFRKANRVGNASPLSVEAFYE---------LIAKGEDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGL
           + YL ++ +A+R    + L  E             L    + + +NTDA  D  NR S FG +LRD  G+++ G+++    C  P   +  A+   L
Subjt:  AWILDYLADFRKANRVGNASPLSVEAFYE---------LIAKGEDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGL

Query:  HLARRLNVERVTIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR
           + +N+    I +DSL++V+ ++   +  S   S++ DI  L+ +F  +   HV R
Subjt:  HLARRLNVERVTIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR

A0A803QAH8 Uncharacterized protein2.2e-2027.53Show/hide
Query:  CPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRH-----MDIKDRWIHLSRC-REINLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCAWILDYL
        C +C  + E++ HA+F CK AR VWK      +GF   +     M I+D    +S C  +  L++I    W+IW+D+N+V+H +      V  A    +L
Subjt:  CPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRH-----MDIKDRWIHLSRC-REINLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCAWILDYL

Query:  ADFRKANRV---GNASPLSVEAFYELIAKGED--IIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGLHLARRLNVERV
        + F+ A+++      +P      ++         + +N DA FD T ++  FG ++RD  G++   ++     C  P   +   +   L  AR+LN +  
Subjt:  ADFRKANRV---GNASPLSVEAFYELIAKGED--IIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGLHLARRLNVERV

Query:  TIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR
         + +DSL+LV  +R S    SS   +++D+ T L     +   HV R
Subjt:  TIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINFIHVNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.3e-0822.35Show/hide
Query:  LSRHHVPVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIKDRWIHLSRCREINLDLICVGS---------WAIWNDKNHVL-HNRP
        ++  H+  E  C  C  S ET+ H LF C  AR VW A+ P+    +    D    + +L     + +++  +G          W +W  +N ++   + 
Subjt:  LSRHHVPVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIKDRWIHLSRCREINLDLICVGS---------WAIWNDKNHVL-HNRP

Query:  IPNIDVRCAWILDYLADFRKANRVGNASPLSVEAFYELIAKG---EDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLK
            +V    + D+     +    G AS   VE    +  K    + +  NTDA + + N +   G +LR++ G ++   AR+       + A++ A+  
Subjt:  IPNIDVRCAWILDYLADFRKANRVGNASPLSVEAFYELIAKG---EDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLK

Query:  GLHLARRLNVERVTIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINF
         +    R N +R+   SD+  LV ++        ++   + DI  LL  F  + F
Subjt:  GLHLARRLNVERVTIMSDSLVLVQVIRGSGIVDSSIVSIMWDIYTLLPSFHRINF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAATCTATCACGCCATCATGTCCCGGTTGAAGGGTTTTGTCCTATTTGCAAGACGAGTCTAGAAACGATAGAGCATGCCCTGTTTCTTTGCAAGCGAGCTAGGAG
TGTTTGGAAAGCCCTTATCCCCCTTAAAATCGGGTTTCAACAAAGACATATGGACATAAAAGATCGATGGATCCACCTGAGTAGATGTCGGGAGATCAATTTGGATCTCA
TCTGTGTTGGATCGTGGGCGATATGGAATGACAAAAATCACGTGTTACATAACCGTCCTATCCCCAATATTGACGTTCGATGTGCGTGGATTCTTGACTATCTTGCCGAC
TTTCGTAAGGCTAACAGGGTGGGTAACGCTTCTCCCTTGTCCGTAGAAGCATTCTATGAGCTGATTGCAAAAGGTGAGGACATAATTATGAACACGGATGCACCCTTTGA
TGTGACAAACCGGAAATCTGATTTTGGAATTGTTCTTAGAGACAAACAGGGTGAATTGATGACAGGTTTAGCTAGGTCATCCCAAATCTGCACTACTCCTATTTGTGCTA
AAGTGGCAGCAGTGCTAAAAGGATTGCATCTTGCAAGAAGATTGAATGTGGAAAGAGTGACGATTATGTCTGATTCCCTCGTATTGGTCCAAGTTATCCGGGGAAGCGGG
ATAGTGGATTCGAGTATAGTCTCCATTATGTGGGATATATACACTTTACTTCCTTCTTTCCATAGGATTAATTTTATTCATGTCAATCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAATCTATCACGCCATCATGTCCCGGTTGAAGGGTTTTGTCCTATTTGCAAGACGAGTCTAGAAACGATAGAGCATGCCCTGTTTCTTTGCAAGCGAGCTAGGAG
TGTTTGGAAAGCCCTTATCCCCCTTAAAATCGGGTTTCAACAAAGACATATGGACATAAAAGATCGATGGATCCACCTGAGTAGATGTCGGGAGATCAATTTGGATCTCA
TCTGTGTTGGATCGTGGGCGATATGGAATGACAAAAATCACGTGTTACATAACCGTCCTATCCCCAATATTGACGTTCGATGTGCGTGGATTCTTGACTATCTTGCCGAC
TTTCGTAAGGCTAACAGGGTGGGTAACGCTTCTCCCTTGTCCGTAGAAGCATTCTATGAGCTGATTGCAAAAGGTGAGGACATAATTATGAACACGGATGCACCCTTTGA
TGTGACAAACCGGAAATCTGATTTTGGAATTGTTCTTAGAGACAAACAGGGTGAATTGATGACAGGTTTAGCTAGGTCATCCCAAATCTGCACTACTCCTATTTGTGCTA
AAGTGGCAGCAGTGCTAAAAGGATTGCATCTTGCAAGAAGATTGAATGTGGAAAGAGTGACGATTATGTCTGATTCCCTCGTATTGGTCCAAGTTATCCGGGGAAGCGGG
ATAGTGGATTCGAGTATAGTCTCCATTATGTGGGATATATACACTTTACTTCCTTCTTTCCATAGGATTAATTTTATTCATGTCAATCGTTAG
Protein sequenceShow/hide protein sequence
MGNLSRHHVPVEGFCPICKTSLETIEHALFLCKRARSVWKALIPLKIGFQQRHMDIKDRWIHLSRCREINLDLICVGSWAIWNDKNHVLHNRPIPNIDVRCAWILDYLAD
FRKANRVGNASPLSVEAFYELIAKGEDIIMNTDAPFDVTNRKSDFGIVLRDKQGELMTGLARSSQICTTPICAKVAAVLKGLHLARRLNVERVTIMSDSLVLVQVIRGSG
IVDSSIVSIMWDIYTLLPSFHRINFIHVNR