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Lag0012020 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012020
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr1:36395143..36395637
RNA-Seq ExpressionLag0012020
SyntenyLag0012020
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]2.7e-2957.66Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE
        M LG + LK S  PLVGFGGE+V P G +E PVTF  G ++VT+M++ LVV+   +YNAILGRPT+H L+A+ STYHQ +KFPT  GVG + GEQ+ SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE

Query:  CYFMALRNIDR
        CY+ ++R+ DR
Subjt:  CYFMALRNIDR
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]2.5e-3056.76Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE
        M LG E LK SLTPL+GFGGE++ P+G +ELP+TF    +++TRM++FLVVD   +YN IL RPT+H L+A+ STYHQ +KFPT  GVG + GEQ+ SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE

Query:  CYFMALRNIDR
        CY+ ++R  D+
Subjt:  CYFMALRNIDR
XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]6.1e-2955Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE
        M LG E LK SLTPL+GFGGE+V P G +ELPVTF  G +++T+M++FLVVD   +YNAIL R T++ LKA+ STYHQ +KFPT  GVG + GEQ+  RE
Subjt:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE

Query:  CYFMALRNIDRKIQATSASG
        CY+  +   D+    TS +G
Subjt:  CYFMALRNIDRKIQATSASG
XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]4.6e-2959.46Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE
        M LG + LK S  PLVGFGGE+V   G +ELPVTF  G ++VT+M++FLVV+   +YNAILGRPT+H LKA+ STYHQ  KFPT  GVG + GEQ+ SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE

Query:  CYFMALRNIDR
        CY  ++R+ DR
Subjt:  CYFMALRNIDR
XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]2.3e-2857.66Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE
        M LG + LK S  PL+GFG E+V P G +EL VTF  G ++VT+M++FLVVD   +YNAILGR T+H LKA+ STYHQ +KFPT  GVG + GEQ+ SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE

Query:  CYFMALRNIDR
        CY+ ++R  DR
Subjt:  CYFMALRNIDR
TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141471.3e-2957.66Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE
        M LG + LK S  PLVGFGGE+V P G +E PVTF  G ++VT+M++ LVV+   +YNAILGRPT+H L+A+ STYHQ +KFPT  GVG + GEQ+ SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE

Query:  CYFMALRNIDR
        CY+ ++R+ DR
Subjt:  CYFMALRNIDR
A0A6J1CZ14 uncharacterized protein LOC1110159011.2e-3056.76Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE
        M LG E LK SLTPL+GFGGE++ P+G +ELP+TF    +++TRM++FLVVD   +YN IL RPT+H L+A+ STYHQ +KFPT  GVG + GEQ+ SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE

Query:  CYFMALRNIDR
        CY+ ++R  D+
Subjt:  CYFMALRNIDR
A0A6J1DKR9 uncharacterized protein LOC1110214382.9e-2955Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE
        M LG E LK SLTPL+GFGGE+V P G +ELPVTF  G +++T+M++FLVVD   +YNAIL R T++ LKA+ STYHQ +KFPT  GVG + GEQ+  RE
Subjt:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE

Query:  CYFMALRNIDRKIQATSASG
        CY+  +   D+    TS +G
Subjt:  CYFMALRNIDRKIQATSASG
A0A6J1DQY2 uncharacterized protein LOC1110223212.2e-2959.46Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE
        M LG + LK S  PLVGFGGE+V   G +ELPVTF  G ++VT+M++FLVV+   +YNAILGRPT+H LKA+ STYHQ  KFPT  GVG + GEQ+ SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE

Query:  CYFMALRNIDR
        CY  ++R+ DR
Subjt:  CYFMALRNIDR
A0A6J1DXV4 uncharacterized protein LOC1110251471.1e-2857.66Show/hide
Query:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE
        M LG + LK S  PL+GFG E+V P G +EL VTF  G ++VT+M++FLVVD   +YNAILGR T+H LKA+ STYHQ +KFPT  GVG + GEQ+ SRE
Subjt:  MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRE

Query:  CYFMALRNIDR
        CY+ ++R  DR
Subjt:  CYFMALRNIDR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTAGGGAGTGAACACCTAAAACCGAGCCTTACGCCGTTGGTGGGTTTCGGTGGAGAAAAAGTAAACCCGAGAGGGAGCGTCGAGTTACCAGTGACGTTTGCAGA
GGGGTTGCGGACAGTAACAAGGATGATCAATTTCTTGGTGGTTGACTGCGTCCCGGCATATAATGCCATCTTGGGACGACCCACTCTGCACGGGCTCAAGGCCGTAGCCT
CAACCTACCACCAAGTCTTGAAATTCCCAACTGAAGAAGGCGTTGGAGCGGTGTACGGCGAGCAGAAAACGTCGAGGGAATGCTACTTCATGGCCCTCAGAAACATTGAC
AGAAAAATTCAGGCGACGTCAGCCTCGGGATATGGGCGAGGCCGAGCAGTTGAGGGGCAAGTCTTCCCCTTCCAATGGAGCATTAGTTTATTGTTTACTGTGTTTTCAGT
CCTCCGAGACTATTTTCAACTTTCGCTACTCTTTGTAATCAATTTGCTGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTAGGGAGTGAACACCTAAAACCGAGCCTTACGCCGTTGGTGGGTTTCGGTGGAGAAAAAGTAAACCCGAGAGGGAGCGTCGAGTTACCAGTGACGTTTGCAGA
GGGGTTGCGGACAGTAACAAGGATGATCAATTTCTTGGTGGTTGACTGCGTCCCGGCATATAATGCCATCTTGGGACGACCCACTCTGCACGGGCTCAAGGCCGTAGCCT
CAACCTACCACCAAGTCTTGAAATTCCCAACTGAAGAAGGCGTTGGAGCGGTGTACGGCGAGCAGAAAACGTCGAGGGAATGCTACTTCATGGCCCTCAGAAACATTGAC
AGAAAAATTCAGGCGACGTCAGCCTCGGGATATGGGCGAGGCCGAGCAGTTGAGGGGCAAGTCTTCCCCTTCCAATGGAGCATTAGTTTATTGTTTACTGTGTTTTCAGT
CCTCCGAGACTATTTTCAACTTTCGCTACTCTTTGTAATCAATTTGCTGGTTTGA
Protein sequenceShow/hide protein sequence
MKLGSEHLKPSLTPLVGFGGEKVNPRGSVELPVTFAEGLRTVTRMINFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKTSRECYFMALRNID
RKIQATSASGYGRGRAVEGQVFPFQWSISLLFTVFSVLRDYFQLSLLFVINLLV