CuGenDBv2

Gene ID	Lag0012028
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	heat stress transcription factor B-2b-like
Genome location	chr1:36534421..36534858
RNA-Seq Expression	Lag0012028
Synteny	Lag0012028
Gene Ontology terms	GO:0006012 - galactose metabolic process (biological process) GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0005634 - nucleus (cellular component) GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0003978 - UDP-glucose 4-epimerase activity (molecular function) GO:0008168 - methyltransferase activity (molecular function)
InterPro domains	IPR027725 - Heat shock transcription factor family

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6606116.1 Heat stress transcription factor B-2b, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-41

74.81

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Query:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS
        PA+++ P VTV AS  VA  VISP NSAEE VTSSNSS M FQ+GTSC T  EL+REN  LRK NMQLSHELTQ KGLCNNILS M NYAS HQQLES S
Subjt:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS

Query:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED
        V DGKAL+LLPARQ+M+DEGA+SDGIQE+RLKVE+
Subjt:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED

XP_022958418.1 heat stress transcription factor B-2b-like [Cucurbita moschata]

1.6e-41

74.81

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Query:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS
        PA+++ P VTV AS  VA  VISP NSAEE VTSSNSS M FQ+GTSC T  EL+REN  LRK NMQLSHELTQ KGLCNNILS M NYAS HQQLES S
Subjt:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS

Query:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED
        V DGKAL+LLPARQ+M+DEGA+SDGIQE+RLKVE+
Subjt:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED

XP_022996371.1 heat stress transcription factor B-2b-like [Cucurbita maxima]

8.0e-41

74.81

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Query:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS
        PA+++ P VTV AS  VA  VISP NSAEE VTSSNSS M FQ+ TSC T  EL+REN  LRK NMQLSHELTQ KGLCNNILS M NYAS HQQLES S
Subjt:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS

Query:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED
        V DGKALELLPARQ+M+DEGA+SDGIQE+RLKVE+
Subjt:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED

XP_023521234.1 heat stress transcription factor B-2b-like [Cucurbita pepo subsp. pepo]

1.6e-41

74.81

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Query:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS
        PA+++ P VTV AS  VA  VISP NSAEE VTSSNSS M FQ+GTSC T  EL+REN  LRK NMQLSHELTQ KGLCNNILS M NYAS HQQLES S
Subjt:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS

Query:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED
        V DGKAL+LLPARQ+M+DEGA+SDGIQE+RLKVE+
Subjt:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED

XP_038875590.1 heat stress transcription factor B-2b [Benincasa hispida]

2.1e-41

73.94

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Query:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDH-QQLESA
        PAA+A  PV V AS  V  HVISPANS EE VTSSNSS M FQ+GTSC+T  EL+REN  LRK NMQLSHELTQ KGLCNNILS M NYASDH  QLES 
Subjt:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDH-QQLESA

Query:  SVWDGKALELLPARQVMEDEGAISDGIQEMRLKVEDTSMGMV
        SV DGKALELLPARQVMEDEGA+SDG QE+RLK+E+T    V
Subjt:  SVWDGKALELLPARQVMEDEGAISDGIQEMRLKVEDTSMGMV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KNZ8 HSF_DOMAIN domain-containing protein

1.9e-40

74.81

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Query:  AAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYAS-DHQQLESAS
        +A  A PVTV  S  V  HVISPANSAEE VTSSNSS MAFQ+ TSC+T  EL+REN  LRK NMQLSHELTQ KGLCNNILS M NYAS  HQQLES S
Subjt:  AAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYAS-DHQQLESAS

Query:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED
        V DGKALELLPARQVMEDEGA+SDG  E+RLK+E+
Subjt:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED

A0A6J1DU11 heat stress transcription factor B-2b

1.1e-38

72.22

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Query:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS
        PAAM + PVTV A+  VA HVISPANS EE VTSSNSS MAFQ+GTSC+T  EL+REN  LRK NMQLSHELTQ KGLCNNILS M NYAS HQ  ES S
Subjt:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS

Query:  VWDGKALELLPARQV-MEDEGAISDGIQEMRLKVEDTSMGMVEA
        V DGKALEL+PA QV MEDEGA+SDGIQE+RLKVE+ +     A
Subjt:  VWDGKALELLPARQV-MEDEGAISDGIQEMRLKVEDTSMGMVEA

A0A6J1H317 heat stress transcription factor B-2b-like

7.8e-42

74.81

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Query:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS
        PA+++ P VTV AS  VA  VISP NSAEE VTSSNSS M FQ+GTSC T  EL+REN  LRK NMQLSHELTQ KGLCNNILS M NYAS HQQLES S
Subjt:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS

Query:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED
        V DGKAL+LLPARQ+M+DEGA+SDGIQE+RLKVE+
Subjt:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED

A0A6J1I230 heat stress transcription factor B-2b-like

4.7e-39

73.28

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Query:  PVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYAS-DHQQLESASVWDGKA
        PV V AS +V  HVISP+NSAEE VTSSNSS MAFQ+GTSCST  EL+ EN  LRK NMQLSHELTQ KGLCNNILS M NYAS  H QL+S SV D KA
Subjt:  PVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYAS-DHQQLESASVWDGKA

Query:  LELLPARQVMEDEGAISDGIQEMRLKVEDTS
        LELLPARQ M+D+GA+SDG+QE+RLKVE+T+
Subjt:  LELLPARQVMEDEGAISDGIQEMRLKVEDTS

A0A6J1K1R0 heat stress transcription factor B-2b-like

3.9e-41

74.81

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Query:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS
        PA+++ P VTV AS  VA  VISP NSAEE VTSSNSS M FQ+ TSC T  EL+REN  LRK NMQLSHELTQ KGLCNNILS M NYAS HQQLES S
Subjt:  PAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMNYASDHQQLESAS

Query:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED
        V DGKALELLPARQ+M+DEGA+SDGIQE+RLKVE+
Subjt:  VWDGKALELLPARQVMEDEGAISDGIQEMRLKVED

SwissProt top hits

e value

%identity

Alignment

Q9SCW4 Heat stress transcription factor B-2a

2.5e-05

38.52

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Query:  TVVASSTV---ATHVISPANSAEEH-----VTSSNSSSMAFQQGTSCS--TMSELIRENGWLR-KNMQLSHELTQFKGLCNNILSFMMNYASDHQQLESA
        TVVA S+     T V+SP+NS E++     ++SS SS    Q  T+ +     EL+ EN  LR +N+QL+ ELTQ K +C+NI S M NY        S 
Subjt:  TVVASSTV---ATHVISPANSAEEH-----VTSSNSSSMAFQQGTSCS--TMSELIRENGWLR-KNMQLSHELTQFKGLCNNILSFMMNYASDHQQLESA

Query:  SVW--DGKALELLPARQVMEDE
        S      + +E LPA++  E E
Subjt:  SVW--DGKALELLPARQVMEDE

Q9T0D3 Heat stress transcription factor B-2b

1.1e-11

38.18

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Query:  AAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMA-------------FQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMN
        AA+AA  VTV A   VA H++SP+NS EE V SSNSS  A              Q+ TSC+T  EL+ EN  LRK N +L  E+T+ KGL  NI + M N
Subjt:  AAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMA-------------FQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMN

Query:  YASDHQQLESASVWDGKALELLPARQVMED---EGAISDGI-----QEMRLKVEDTSMGMVEAER
        +    +   +  + +GK L+LLP RQ M +      I  GI     +++  ++   S+G+  A R
Subjt:  YASDHQQLESASVWDGKALELLPARQVMED---EGAISDGI-----QEMRLKVEDTSMGMVEAER

Arabidopsis top hits

e value

%identity

Alignment

AT4G11660.1 winged-helix DNA-binding transcription factor family protein

7.5e-13

38.18

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Query:  AAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMA-------------FQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMN
        AA+AA  VTV A   VA H++SP+NS EE V SSNSS  A              Q+ TSC+T  EL+ EN  LRK N +L  E+T+ KGL  NI + M N
Subjt:  AAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMA-------------FQQGTSCSTMSELIRENGWLRK-NMQLSHELTQFKGLCNNILSFMMN

Query:  YASDHQQLESASVWDGKALELLPARQVMED---EGAISDGI-----QEMRLKVEDTSMGMVEAER
        +    +   +  + +GK L+LLP RQ M +      I  GI     +++  ++   S+G+  A R
Subjt:  YASDHQQLESASVWDGKALELLPARQVMED---EGAISDGI-----QEMRLKVEDTSMGMVEAER

AT5G62020.1 heat shock transcription factor B2A

1.8e-06

38.52

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Query:  TVVASSTV---ATHVISPANSAEEH-----VTSSNSSSMAFQQGTSCS--TMSELIRENGWLR-KNMQLSHELTQFKGLCNNILSFMMNYASDHQQLESA
        TVVA S+     T V+SP+NS E++     ++SS SS    Q  T+ +     EL+ EN  LR +N+QL+ ELTQ K +C+NI S M NY        S 
Subjt:  TVVASSTV---ATHVISPANSAEEH-----VTSSNSSSMAFQQGTSCS--TMSELIRENGWLR-KNMQLSHELTQFKGLCNNILSFMMNYASDHQQLESA

Query:  SVW--DGKALELLPARQVMEDE
        S      + +E LPA++  E E
Subjt:  SVW--DGKALELLPARQVMEDE

Sequences

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CDS sequence

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ATGCCGGCCGCCATGGCTGCACCACCAGTGACAGTCGTAGCGTCTTCGACGGTGGCAACGCATGTGATATCACCGGCGAACTCTGCGGAAGAGCACGTGACATCGTCCAA
CTCATCGTCGATGGCATTTCAGCAAGGTACGAGCTGCAGCACCATGTCAGAACTCATAAGAGAGAACGGGTGGCTGAGGAAGAACATGCAACTGAGTCATGAGTTGACTC
AGTTCAAAGGACTGTGCAACAACATACTGTCGTTCATGATGAATTACGCTTCAGATCACCAACAGTTGGAGTCGGCGAGTGTTTGGGACGGGAAGGCGTTGGAGCTCTTG
CCGGCGAGGCAGGTGATGGAAGACGAAGGCGCCATCAGCGACGGGATTCAGGAGATGAGACTGAAGGTGGAGGATACATCGATGGGTATGGTGGAAGCGGAAAGATGA

mRNA sequence

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Protein sequence

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MPAAMAAPPVTVVASSTVATHVISPANSAEEHVTSSNSSSMAFQQGTSCSTMSELIRENGWLRKNMQLSHELTQFKGLCNNILSFMMNYASDHQQLESASVWDGKALELL
PARQVMEDEGAISDGIQEMRLKVEDTSMGMVEAER

Lag0012028 (gene) of Sponge gourd (AG-4) v1 genome