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Lag0012042 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012042
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr1:36793748..36795055
RNA-Seq ExpressionLag0012042
SyntenyLag0012042
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR017956 - AT hook, DNA-binding motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATTACAACAAAGGAACGGAATAGCCTTAACCTACCCCTTATTCCCAGCCCCCACTCGACACGGGCATTTATTACCTCAAGCGTTGCATTTTTCGAGCGAGAAGG
ACTAGTTCCATACCTGGCCTTTTCGAAGGGGGATGGTCGGCCTCGGCCTTGGCATGAGGCTGACCAGCAGCTCTGTACTACTTGCTCGCAGACGTCCAGGCTTATGTGCA
GATTTGCCCGATTCTACCTTAAGCATCTCCCTGCGGCCTTGAGCGCCTCGACTGCGCCAAAAAGTAAAGTGACTGTGCTAAAGGCACGCTGCCTTGAATGTGTGCTTGAT
GGTTGGCCTTGGAGTTGGGATGTTTGGCCTTGGCATGACGATGCGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCCAAGAAATTTCCGAGCATCTCTTCAAGCTGTC
ACGGTCATCCCAGGGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGC
CTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCA
AGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGGGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGT
ACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGA
GGCCTAGGAAATTCCCGGGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTT
CAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGCTGTATTCATCCCGAGGGT
GCATACACTCAGTCGGGGGAAGTGCGGAAGTCTGGCCACACGCGTTACCTCCTATGGAAAAAGCATTTTATGCGAAACACAATGCAAAAAACTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGATTACAACAAAGGAACGGAATAGCCTTAACCTACCCCTTATTCCCAGCCCCCACTCGACACGGGCATTTATTACCTCAAGCGTTGCATTTTTCGAGCGAGAAGG
ACTAGTTCCATACCTGGCCTTTTCGAAGGGGGATGGTCGGCCTCGGCCTTGGCATGAGGCTGACCAGCAGCTCTGTACTACTTGCTCGCAGACGTCCAGGCTTATGTGCA
GATTTGCCCGATTCTACCTTAAGCATCTCCCTGCGGCCTTGAGCGCCTCGACTGCGCCAAAAAGTAAAGTGACTGTGCTAAAGGCACGCTGCCTTGAATGTGTGCTTGAT
GGTTGGCCTTGGAGTTGGGATGTTTGGCCTTGGCATGACGATGCGTACACTCTTCTGGGGAAAAGGCTTGGGGAGGCCCAAGAAATTTCCGAGCATCTCTTCAAGCTGTC
ACGGTCATCCCAGGGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGC
CTAGGAAATTCCCGAGCCTCTCTTCAAGCTGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCA
AGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGGGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGT
ACACTCTTCTGGGGAAAGGCTTGGGGAGGCCAAGGAAATTCCCGAGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGA
GGCCTAGGAAATTCCCGGGCCTCTCTTCAAGCGTCATGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAGGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTT
CAAGCTGTTGTAGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAAATTCCCGAGCCTCTCTTCAAGCTGCTGTATTCATCCCGAGGGT
GCATACACTCAGTCGGGGGAAGTGCGGAAGTCTGGCCACACGCGTTACCTCCTATGGAAAAAGCATTTTATGCGAAACACAATGCAAAAAACTTCATTAA
Protein sequenceShow/hide protein sequence
MMITTKERNSLNLPLIPSPHSTRAFITSSVAFFEREGLVPYLAFSKGDGRPRPWHEADQQLCTTCSQTSRLMCRFARFYLKHLPAALSASTAPKSKVTVLKARCLECVLD
GWPWSWDVWPWHDDAYTLLGKRLGEAQEISEHLFKLSRSSQGLGEAKEIPEPLFKRHGHPRGAYTLLGKSLGRPRKFPSLSSSCHGHPRGAYTLLGKGLGRPRKFPSLSS
SVMVIPGVRTLFWGKAWGGLGNSRASLQASWSSQGCVHSSGERLGEAKEIPEPLFKRHGHPRGAYTLLGKSLGRPRKFPGLSSSVMVIPGVRTLFWGKAWGGLGNSRASL
QAVVVIPGVRTLFWGKAWGGLGNSRASLQAAVFIPRVHTLSRGKCGSLATRVTSYGKSILCETQCKKLH