; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012056 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012056
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHistone deacetylase
Genome locationchr1:36904365..36904919
RNA-Seq ExpressionLag0012056
SyntenyLag0012056
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB1321336.1 unnamed protein product, partial [Coregonus sp. 'balchen']5.8e-1228.5Show/hide
Query:  DLLDLLIFLDDRPVR-LMISWIDLLGLLIFLDDRSVDLLIFVIDRF------------DDRSADLLIFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLI
        +++ +L+F  D     LM    +++G+L+F  D  V +L+F  D               D    +L+F  D  VG+L+F  D  VG L+F  D    +L+
Subjt:  DLLDLLIFLDDRPVR-LMISWIDLLGLLIFLDDRSVDLLIFVIDRF------------DDRSADLLIFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLI

Query:  FSDDRF-------DDRSADLLIFLDDRHVGLLIFLDDRPVGLLIFLDDWSTDLLIFSDDRF-------DDRSADLLIFLDDRPVGLLIFLDDRSADLLIF
        F  D          D    +L+F  D  VG+L+F  D   G+L+F  D    +L+F  D          D    +L+F  D  VG+L+F  D    +L+F
Subjt:  FSDDRF-------DDRSADLLIFLDDRHVGLLIFLDDRPVGLLIFLDDWSTDLLIFSDDRF-------DDRSADLLIFLDDRPVGLLIFLDDRSADLLIF

WP_207114037.1 hypothetical protein [Enterococcus hulanensis]4.0e-1342.93Show/hide
Query:  LLIFLDDRPVRLMI-------SWIDLLGLLIFL--DDRSVDLLIFVIDRFDDRSADLLIFL--DDRPVGLLIFL---DDRPVGSLIFL---DDRSTDLLI
        LL+ LDD  V L++       S ++LL LL+ L  DD SV+LL+ ++D  DD S +LL+ L  DD  V LL+ L   DD  V  L+ L   DD S +LL+
Subjt:  LLIFLDDRPVRLMI-------SWIDLLGLLIFL--DDRSVDLLIFVIDRFDDRSADLLIFL--DDRPVGLLIFL---DDRPVGSLIFL---DDRSTDLLI

Query:  FSDDRFDDRSADLLIFL--DDRHVGLLIFL--DDRPVGLLIFL--DDWSTDLLIFSDDRFDDRSADLLIFL--DDRPVGLLIFL--DDRSADLLIFLI
          D   DD S +LL+ L  DD  V LL+ L  DD  V LL+ L  DD S +LL+   D  DD S +LL+ L  DD  V LL+ L  DD S +LL+ L+
Subjt:  FSDDRFDDRSADLLIFL--DDRHVGLLIFL--DDRPVGLLIFL--DDWSTDLLIFSDDRFDDRSADLLIFL--DDRPVGLLIFL--DDRSADLLIFLI

WP_217833387.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]6.0e-0957.14Show/hide
Query:  IFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLIFSDDRFDDRSADLLIFLDDRHVGLLIFLDDRPVGLL
        IFLDDRP+GLLIFLDDRP+G +IF               F DR   LL  LDDR +GLLIFLDDRP+  L
Subjt:  IFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLIFSDDRFDDRSADLLIFLDDRHVGLLIFLDDRPVGLL

XP_013783717.1 late embryogenesis abundant protein 76-like [Limulus polyphemus]1.1e-1334.84Show/hide
Query:  LLIFLDDRSVDLLIFVIDRFDDRSADLLIFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLIFSDDR-------FDDRSADLLIFLDDRHVGLLIFLDDR
        L  FL+D+S +L  F+    +D+S++L  FL+D+   L  FL+D+      FL+D+S +L  F +D+        +D S++L  FL+D+   L  FL+D+
Subjt:  LLIFLDDRSVDLLIFVIDRFDDRSADLLIFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLIFSDDR-------FDDRSADLLIFLDDRHVGLLIFLDDR

Query:  PVGLLIFLDDWSTDLLIFSDDRFDDRSADLLIFLDDRPVGLLIFLDDRSADLLIF
           L  FL+D S++L  F     +D+S++L  FL+D+   L+ FL+D+S++L  F
Subjt:  PVGLLIFLDDWSTDLLIFSDDRFDDRSADLLIFLDDRPVGLLIFLDDRSADLLIF

XP_042162140.1 uncharacterized protein LOC121840813 isoform X2 [Oncorhynchus tshawytscha]5.1e-0834.78Show/hide
Query:  LGLLIFLDDRSVDLLIFVIDRFDDRSADLLIFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLIFSDDRFDDRSADLLIFLDDRHVGLLIFLDDRPVGLL
        L  L+FL +R +  L+F+ +R   R A LL FL +R +  L+FL +R +  L+FL +R    L+F  +R   R A LL FL +R +  L+FL +R +  L
Subjt:  LGLLIFLDDRSVDLLIFVIDRFDDRSADLLIFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLIFSDDRFDDRSADLLIFLDDRHVGLLIFLDDRPVGLL

Query:  IFLDDWSTDLLIFSDDR-------FDDRSADLLIFLDDRPVGLLIFLDDRSADLLIFLIGR
        +FL +     L+F  +R         +R    L+FL +R +  L+FL +R    L+FL  R
Subjt:  IFLDDWSTDLLIFSDDR-------FDDRSADLLIFLDDRPVGLLIFLDDRSADLLIFLIGR

TrEMBL top hitse value%identityAlignment
A0A4S8J479 Uncharacterized protein9.6e-0539.16Show/hide
Query:  DLLDLLIFLDDRPVRLMISWIDLLGLLIFLDDRS-------VDLLIFVIDRFD---DRSADLLIFLDDRP-------VGLLIFLDDRPVGSLIFLDDRST
        DL+D+LI LDD+      S  DL+ +LI LDD+        VD+LI + D+ D   D   D+LI LDD+        V +LI LDD+   S+    D   
Subjt:  DLLDLLIFLDDRPVRLMISWIDLLGLLIFLDDRS-------VDLLIFVIDRFD---DRSADLLIFLDDRP-------VGLLIFLDDRPVGSLIFLDDRST

Query:  DLLIFSDDRFD---DRSADLLIFLDDRH-----VGLLIFLDDR
        D+LI  DD+ D   D   D+LI LDD       V +LI LDD+
Subjt:  DLLIFSDDRFD---DRSADLLIFLDDRH-----VGLLIFLDDR

A0A674B7D6 Histone deacetylase4.0e-1129.63Show/hide
Query:  LGLLIFLDDRSVDLLIFVIDRFDDRSADLLIFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLIFSDDR-------FDDRSADLLIFLDDRHVGLLIFLD
        +  L  +DD S++ L+ +    DD S + L  +DD  +  L  +DD  +  L+ +DD S + L   DD         DD S + L+ +DD  +  L+ +D
Subjt:  LGLLIFLDDRSVDLLIFVIDRFDDRSADLLIFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLIFSDDR-------FDDRSADLLIFLDDRHVGLLIFLD

Query:  DRPVGLLIFLDDWSTDLLIFSDDR-------FDDRSADLLIFLDDRPVGLLIFLDDRSADLL
        D  +  L  +DD S + L   DD         DD S + L+ +DD  +  L+ +DD S + L
Subjt:  DRPVGLLIFLDDWSTDLLIFSDDR-------FDDRSADLLIFLDDRPVGLLIFLDDRSADLL

A0A6F9AD32 Uncharacterized protein (Fragment)2.8e-1228.5Show/hide
Query:  DLLDLLIFLDDRPVR-LMISWIDLLGLLIFLDDRSVDLLIFVIDRF------------DDRSADLLIFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLI
        +++ +L+F  D     LM    +++G+L+F  D  V +L+F  D               D    +L+F  D  VG+L+F  D  VG L+F  D    +L+
Subjt:  DLLDLLIFLDDRPVR-LMISWIDLLGLLIFLDDRSVDLLIFVIDRF------------DDRSADLLIFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLI

Query:  FSDDRF-------DDRSADLLIFLDDRHVGLLIFLDDRPVGLLIFLDDWSTDLLIFSDDRF-------DDRSADLLIFLDDRPVGLLIFLDDRSADLLIF
        F  D          D    +L+F  D  VG+L+F  D   G+L+F  D    +L+F  D          D    +L+F  D  VG+L+F  D    +L+F
Subjt:  FSDDRF-------DDRSADLLIFLDDRHVGLLIFLDDRPVGLLIFLDDWSTDLLIFSDDRF-------DDRSADLLIFLDDRPVGLLIFLDDRSADLLIF

A0A6F9CLU8 Lipase domain-containing protein5.7e-0524.74Show/hide
Query:  LDLLIFL--DDRPVRLMISWIDLLGLLIFLDDRSVDLLIFVIDRFDDRSADLLIFL--DDRPVGLLIFL--DDRPVGSLIFL--DDRSTDLLIFSDDRFD
        +++L+F+  +D+ V +++         I  +D+ V++L+F+    +D+  ++L+F+  +D+ V +L+F+  +D+ V  L+F+  +D+  ++L+F     +
Subjt:  LDLLIFL--DDRPVRLMISWIDLLGLLIFLDDRSVDLLIFVIDRFDDRSADLLIFL--DDRPVGLLIFL--DDRPVGSLIFL--DDRSTDLLIFSDDRFD

Query:  DRSADLLIFL--DDRHVGLLIFL--DDRPVGLLIFL--DDWSTDLLIF----SDDRFDDRSADLLIFL--DDRPVGLLIFL--DDRSADLLIFL
        D+  ++L+F+  +D+ V +L+F+  +D+ V +L+F+  +D   ++L+F      D  +D+  ++L+F+  +D+ V +L+F+  +D+  ++L+F+
Subjt:  DRSADLLIFL--DDRHVGLLIFL--DDRPVGLLIFL--DDWSTDLLIF----SDDRFDDRSADLLIFL--DDRPVGLLIFL--DDRSADLLIFL

A0A6J8ETI0 Uncharacterized protein7.4e-0526.98Show/hide
Query:  IDLLDLLIFLDDRPVRLMISWID-LLGLLIFLDDRSV-------DLLIFVIDRFDDRSADLLIFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLIFSDD
        + L++ +  LDD+ V  +    D L+  +  LDD+ V       D L+  I   DD+ A+ +   D + V  +  LDD+ V S+  LDD+  + +   DD
Subjt:  IDLLDLLIFLDDRPVRLMISWID-LLGLLIFLDDRSV-------DLLIFVIDRFDDRSADLLIFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLIFSDD

Query:  R-------FDDRSADLLIFLDDRHVGLLIFLDDRPVGLLIFLDDWSTDLLIFSDDR-------FDDRSADLLIFLDDRPVGLLIFLDDR
        +        DD+  + +  LDD+ +  +  LD + V  +  LDD   + +   DD+        DD+  + +  LDD+ V  +  LDD+
Subjt:  R-------FDDRSADLLIFLDDRHVGLLIFLDDRPVGLLIFLDDWSTDLLIFSDDR-------FDDRSADLLIFLDDRPVGLLIFLDDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCTTGGATCGACCTATTGGACTTGTTGATCTTCTTGGATGATCGGCCTGTTAGGTTGATGATCTCCTGGATCGACCTATTGGGCTTGTTGATCTTCTTGGATGA
TCGGTCTGTTGACTTGTTGATCTTCGTGATCGATCGGTTTGATGATCGGTCTGCTGACTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTCTTGGATG
ATCGGCCTGTTGGCTCGTTGATCTTCTTGGATGATCGGTCTACTGACTTATTGATCTTCTCGGATGATCGGTTTGATGATCGGTCTGCTGATTTGTTGATCTTCTTGGAT
GATCGGCATGTTGGCTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTCTTGGATGATTGGTCTACTGACTTATTGATCTTCTCGGATGATCGGTTTGA
TGATCGGTCTGCTGATTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTCTTGGATGATCGGTCTGCTGACTTGTTGATCTTCTTGATCGGTCGATTAG
CTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCTCTTGGATCGACCTATTGGACTTGTTGATCTTCTTGGATGATCGGCCTGTTAGGTTGATGATCTCCTGGATCGACCTATTGGGCTTGTTGATCTTCTTGGATGA
TCGGTCTGTTGACTTGTTGATCTTCGTGATCGATCGGTTTGATGATCGGTCTGCTGACTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTCTTGGATG
ATCGGCCTGTTGGCTCGTTGATCTTCTTGGATGATCGGTCTACTGACTTATTGATCTTCTCGGATGATCGGTTTGATGATCGGTCTGCTGATTTGTTGATCTTCTTGGAT
GATCGGCATGTTGGCTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTCTTGGATGATTGGTCTACTGACTTATTGATCTTCTCGGATGATCGGTTTGA
TGATCGGTCTGCTGATTTGTTGATCTTCTTGGATGATCGGCCTGTTGGCTTGTTGATCTTCTTGGATGATCGGTCTGCTGACTTGTTGATCTTCTTGATCGGTCGATTAG
CTTGA
Protein sequenceShow/hide protein sequence
MISWIDLLDLLIFLDDRPVRLMISWIDLLGLLIFLDDRSVDLLIFVIDRFDDRSADLLIFLDDRPVGLLIFLDDRPVGSLIFLDDRSTDLLIFSDDRFDDRSADLLIFLD
DRHVGLLIFLDDRPVGLLIFLDDWSTDLLIFSDDRFDDRSADLLIFLDDRPVGLLIFLDDRSADLLIFLIGRLA