; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012106 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012106
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionnuclear pore complex protein NUP62
Genome locationchr1:37376139..37393343
RNA-Seq ExpressionLag0012106
SyntenyLag0012106
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0015031 - protein transport (biological process)
GO:0005643 - nuclear pore (cellular component)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR007758 - Nucleoporin, NSP1-like, C-terminal
IPR026010 - Nucleoporin NSP1/NUP62


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK24755.1 nuclear pore complex protein NUP62 [Cucumis melo var. makuwa]6.6e-12295.75Show/hide
Query:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
        GFP+LASASTAATTTSGFSASSQSQTSSALVV+SSSSGTTSTVSA VS+ PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI+QNRDI
Subjt:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI

Query:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
        LLRLEIEVAKVVETQAELE+KLELIETHQQEVDKAL SVE+DAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
Subjt:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD

Query:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
        VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK+AAT+GPAADRELLGQKFWMS
Subjt:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS

XP_008459731.1 PREDICTED: nuclear pore complex protein NUP62 [Cucumis melo]6.6e-12295.75Show/hide
Query:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
        GFP+LASASTAATTTSGFSASSQSQTSSALVV+SSSSGTTSTVSA VS+ PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI+QNRDI
Subjt:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI

Query:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
        LLRLEIEVAKVVETQAELE+KLELIETHQQEVDKAL SVE+DAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
Subjt:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD

Query:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
        VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK+AAT+GPAADRELLGQKFWMS
Subjt:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS

XP_022156652.1 nuclear pore complex protein NUP62, partial [Momordica charantia]3.0e-12296.91Show/hide
Query:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
        GFP+L SASTAATT+SGFSA SQSQTSS LVV+SSSSGTTSTVSAAVST PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
Subjt:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI

Query:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
        LLRLEIEVAKVVETQAELERKLELIETHQQEVDKAL SVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
Subjt:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD

Query:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
        VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
Subjt:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS

XP_031743587.1 nuclear pore complex protein NUP62 [Cucumis sativus]1.5e-12195.75Show/hide
Query:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
        GFP+LASASTAATTTSGFSASSQSQTSSALVV+SSSSGTTSTVSA VS+ PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI+QNRDI
Subjt:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI

Query:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
        LLRLEIEVAKVVETQAELE+KLELIETHQQEVDKAL SVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
Subjt:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD

Query:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
        VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK+AAT+GPAADRELLGQK WMS
Subjt:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS

XP_038874708.1 nuclear pore complex protein NUP62 [Benincasa hispida]3.6e-12094.21Show/hide
Query:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
        GFP+L SA T ATTTSGFSASSQSQTSS LVV+SSSSGTTSTV+A VS+ PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI+QNRDI
Subjt:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI

Query:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
        LLRLEIEVAKVVE+QAELE+KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
Subjt:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD

Query:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
        VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK+AAT+GPAADRELLGQKFWMS
Subjt:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS

TrEMBL top hitse value%identityAlignment
A0A0A0KA27 Nsp1_C domain-containing protein2.7e-12195.37Show/hide
Query:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
        GFP+LASASTAATTTSGFSASSQSQTSSALVV+SSSSGTTSTVSA VS+ PKLPSEITGKTVEEII EWNAELQERTGKFRKQANAIAEWDRRI+QNRDI
Subjt:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI

Query:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
        LLRLEIEVAKVVETQAELE+KLELIETHQQEVDKAL SVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
Subjt:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD

Query:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
        VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK+AAT+GPAADRELLGQK WMS
Subjt:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS

A0A1S3CAD4 nuclear pore complex protein NUP623.2e-12295.75Show/hide
Query:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
        GFP+LASASTAATTTSGFSASSQSQTSSALVV+SSSSGTTSTVSA VS+ PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI+QNRDI
Subjt:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI

Query:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
        LLRLEIEVAKVVETQAELE+KLELIETHQQEVDKAL SVE+DAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
Subjt:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD

Query:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
        VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK+AAT+GPAADRELLGQKFWMS
Subjt:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS

A0A5D3DMB1 Nuclear pore complex protein NUP623.2e-12295.75Show/hide
Query:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
        GFP+LASASTAATTTSGFSASSQSQTSSALVV+SSSSGTTSTVSA VS+ PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI+QNRDI
Subjt:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI

Query:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
        LLRLEIEVAKVVETQAELE+KLELIETHQQEVDKAL SVE+DAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
Subjt:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD

Query:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
        VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK+AAT+GPAADRELLGQKFWMS
Subjt:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS

A0A6J1DSI7 nuclear pore complex protein NUP621.4e-12296.91Show/hide
Query:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
        GFP+L SASTAATT+SGFSA SQSQTSS LVV+SSSSGTTSTVSAAVST PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
Subjt:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI

Query:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
        LLRLEIEVAKVVETQAELERKLELIETHQQEVDKAL SVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
Subjt:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD

Query:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
        VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
Subjt:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS

A0A6J1L2D4 nuclear pore complex protein NUP621.5e-11994.59Show/hide
Query:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
        GF +LASAS AATTTSG +ASSQSQTSS LVV+SSSSGTTSTVSA VS  PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
Subjt:  GFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI

Query:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
        LLRLEIEVAKVVETQ ELE+KLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNA+QGGELD
Subjt:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD

Query:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
        VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK+AATQGPAADRELLGQKFWMS
Subjt:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS

SwissProt top hitse value%identityAlignment
G0SBQ3 Nucleoporin NSP12.1e-1428.85Show/hide
Query:  ALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAA-VSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDILL
        A AS S  ATTT+    S  S T+S       +  TT+ + A+ V    +LP  +  KT++EII  W  +L +   +F++QA  + EWDR +++N + + 
Subjt:  ALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAA-VSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDILL

Query:  RLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAA---STRDAMYEQAEYIERELEQMTEQIKSIIQTLN-----AN
        +L     +      E+ER+L  +E+ Q+E+   L   E + + +Y  + G    ++AA     R+  Y+ AE +  +L++M + +  +I+ +N      +
Subjt:  RLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAA---STRDAMYEQAEYIERELEQMTEQIKSIIQTLN-----AN

Query:  QGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRI---QKIAATQG
        +G + D      PL  +VR+LN  L+ L WID  A    +++   QK A + G
Subjt:  QGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRI---QKIAATQG

P17955 Nuclear pore glycoprotein p628.6e-1630.25Show/hide
Query:  SASTAATTTSGFSASSQSQTSSAL----VVSSSSSGTTSTVSAAVSTAPKLPS--EITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI
        + +T  TTT+  ++SS + T  AL    +V +  S   +T   A STA    +   +T   +E +I +W+ EL+++   F +QA  +  WDR +++N + 
Subjt:  SASTAATTTSGFSASSQSQTSSAL----VVSSSSSGTTSTVSAAVSTAPKLPS--EITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDI

Query:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD
        +  L  EV KV   Q  L+++L+ I + Q+E++  L  +EE      K++ G +    A   R+  Y+ AE I+ +L++M + +K II+ LN   GG  D
Subjt:  LLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELD

Query:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK
          D   PL  + +ILN  + SL W+D+ +     R+++
Subjt:  VIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK

P37198 Nuclear pore glycoprotein p623.9e-1630.58Show/hide
Query:  SASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLP---------SEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQN
        + STAAT T+  + SS S T  AL +   +     + +AA  TAP  P         S +T   +E +I +W+ EL+++   F +QA  +  WDR +++N
Subjt:  SASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLP---------SEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQN

Query:  RDILLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGG
         + +  L  EV KV   Q  L+++L+ I + Q+E++  L  +EE    + K++ G +    A   R+  Y+ AE I+ +L++M + +K II+ LN + G 
Subjt:  RDILLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGG

Query:  ELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKI
          D  D   PL  + +ILN  + SL WID+ +     +++++
Subjt:  ELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKI

Q63850 Nuclear pore glycoprotein p622.7e-1730.04Show/hide
Query:  ASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDILLRLE
        A+A+ A+TTT+GF+ S +   S+     ++++   S+ +A  +T P +    T   +E +I +W+ EL+++   F +QA  +  WDR +++N + +  L 
Subjt:  ASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDILLRLE

Query:  IEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGM
         EV KV   Q  L+++L+ I + Q+E++  L  +EE      K++ G +    A   R+  Y+ AE I+ +L++M + +K II+ LN   GG  D  D  
Subjt:  IEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGM

Query:  TPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK
         PL  + +ILN  + SL W+D+ +     R+++
Subjt:  TPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK

Q8L7F7 Nuclear pore complex protein NUP626.7e-9375.88Show/hide
Query:  PALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDILL
        PA + +  ++T+T+  + SS + T + LVV SSS   TST  A V+ +PKLPSEITGKTVEEIIKEWN ELQERTG+FRKQANAIAEWD+RILQNRD+LL
Subjt:  PALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDILL

Query:  RLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVI
        RLEIEVAKVVETQ+ LER+LELIETHQQEVDKALQS+EE+AERIY DER  LLDDEAASTRDAMYEQ+E +ERELE MTEQI+SIIQ++NANQGGEL+ I
Subjt:  RLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVI

Query:  DGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
        DGM+PLD VVRILNNQLSSLMWIDEKAEEFSSRIQKI A QG   DREL+  K WMS
Subjt:  DGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS

Arabidopsis top hitse value%identityAlignment
AT2G45000.1 structural constituent of nuclear pore4.7e-9475.88Show/hide
Query:  PALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDILL
        PA + +  ++T+T+  + SS + T + LVV SSS   TST  A V+ +PKLPSEITGKTVEEIIKEWN ELQERTG+FRKQANAIAEWD+RILQNRD+LL
Subjt:  PALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDILL

Query:  RLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVI
        RLEIEVAKVVETQ+ LER+LELIETHQQEVDKALQS+EE+AERIY DER  LLDDEAASTRDAMYEQ+E +ERELE MTEQI+SIIQ++NANQGGEL+ I
Subjt:  RLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVI

Query:  DGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS
        DGM+PLD VVRILNNQLSSLMWIDEKAEEFSSRIQKI A QG   DREL+  K WMS
Subjt:  DGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGGAAGACCTCGACCATATTCTGTGGAGGTGCAGTTTTGCTAGGGCTGTGTGGGACATGTTCTTTGTCTCGTTTGGTTTGCAGTTTGCTAGGCACAGGGGCCT
TAGAGAGATGATCGAGGAGTTCCTCCCCATCCCCCTTTTCGTGAGCAGGGGAGATTCTTGTGGCAAGCGGGGATTTGCGCTATTATTTGGGGGCTTTGGGGCGAGAGAAA
TAACAGGACGTTTAGAGGGTTTGAGAGGGACTCGTAAAGACCTGGACATGTATATGGAAAGATTTTATTCAACTGTTTACAAAGAAGGATGCCTCATTGCTCTCTATCTC
CATCTTGGTGTGTCATGTGTTCAAAGGATAATGAGACCCCATGCCACTTATTTAGCTGTTGCTCTTTTGCTCGTTGGTTTTCCTGCTCTGGCTTCTGCTTCCACTGCTGC
TACCACCACGTCTGGTTTCAGTGCTTCAAGTCAGAGTCAGACTTCATCAGCTCTTGTTGTATCAAGCAGTAGTAGTGGTACAACTTCAACTGTAAGTGCTGCAGTGTCTA
CTGCACCGAAATTACCATCTGAGATAACAGGGAAAACGGTTGAAGAGATCATCAAGGAGTGGAATGCAGAGCTTCAAGAGCGTACTGGAAAATTTCGGAAGCAGGCCAAT
GCTATTGCTGAATGGGATAGGAGAATTTTGCAAAATCGTGATATCCTCCTTAGACTTGAGATTGAAGTTGCAAAGGTGGTTGAGACCCAAGCTGAGCTAGAGAGGAAATT
GGAGCTGATTGAAACTCACCAACAAGAGGTTGATAAGGCTTTGCAAAGTGTGGAAGAAGATGCTGAGCGCATTTACAAGGATGAACGTGGTTTACTTCTTGACGATGAGG
CTGCATCTACAAGGGATGCAATGTATGAGCAAGCTGAGTATATAGAACGGGAACTAGAGCAGATGACAGAACAGATCAAATCAATTATCCAGACCCTAAATGCAAACCAG
GGAGGAGAACTTGATGTGATTGATGGGATGACACCGTTAGATGCAGTTGTTCGAATTTTGAACAATCAATTAAGTTCATTAATGTGGATCGATGAAAAGGCCGAAGAGTT
TTCTTCACGTATTCAGAAGATTGCTGCTACCCAAGGTCCTGCTGCAGATCGTGAATTGTTGGGTCAGAAGTTCTGGATGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGGAAGACCTCGACCATATTCTGTGGAGGTGCAGTTTTGCTAGGGCTGTGTGGGACATGTTCTTTGTCTCGTTTGGTTTGCAGTTTGCTAGGCACAGGGGCCT
TAGAGAGATGATCGAGGAGTTCCTCCCCATCCCCCTTTTCGTGAGCAGGGGAGATTCTTGTGGCAAGCGGGGATTTGCGCTATTATTTGGGGGCTTTGGGGCGAGAGAAA
TAACAGGACGTTTAGAGGGTTTGAGAGGGACTCGTAAAGACCTGGACATGTATATGGAAAGATTTTATTCAACTGTTTACAAAGAAGGATGCCTCATTGCTCTCTATCTC
CATCTTGGTGTGTCATGTGTTCAAAGGATAATGAGACCCCATGCCACTTATTTAGCTGTTGCTCTTTTGCTCGTTGGTTTTCCTGCTCTGGCTTCTGCTTCCACTGCTGC
TACCACCACGTCTGGTTTCAGTGCTTCAAGTCAGAGTCAGACTTCATCAGCTCTTGTTGTATCAAGCAGTAGTAGTGGTACAACTTCAACTGTAAGTGCTGCAGTGTCTA
CTGCACCGAAATTACCATCTGAGATAACAGGGAAAACGGTTGAAGAGATCATCAAGGAGTGGAATGCAGAGCTTCAAGAGCGTACTGGAAAATTTCGGAAGCAGGCCAAT
GCTATTGCTGAATGGGATAGGAGAATTTTGCAAAATCGTGATATCCTCCTTAGACTTGAGATTGAAGTTGCAAAGGTGGTTGAGACCCAAGCTGAGCTAGAGAGGAAATT
GGAGCTGATTGAAACTCACCAACAAGAGGTTGATAAGGCTTTGCAAAGTGTGGAAGAAGATGCTGAGCGCATTTACAAGGATGAACGTGGTTTACTTCTTGACGATGAGG
CTGCATCTACAAGGGATGCAATGTATGAGCAAGCTGAGTATATAGAACGGGAACTAGAGCAGATGACAGAACAGATCAAATCAATTATCCAGACCCTAAATGCAAACCAG
GGAGGAGAACTTGATGTGATTGATGGGATGACACCGTTAGATGCAGTTGTTCGAATTTTGAACAATCAATTAAGTTCATTAATGTGGATCGATGAAAAGGCCGAAGAGTT
TTCTTCACGTATTCAGAAGATTGCTGCTACCCAAGGTCCTGCTGCAGATCGTGAATTGTTGGGTCAGAAGTTCTGGATGTCTTAA
Protein sequenceShow/hide protein sequence
MAEEDLDHILWRCSFARAVWDMFFVSFGLQFARHRGLREMIEEFLPIPLFVSRGDSCGKRGFALLFGGFGAREITGRLEGLRGTRKDLDMYMERFYSTVYKEGCLIALYL
HLGVSCVQRIMRPHATYLAVALLLVGFPALASASTAATTTSGFSASSQSQTSSALVVSSSSSGTTSTVSAAVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQAN
AIAEWDRRILQNRDILLRLEIEVAKVVETQAELERKLELIETHQQEVDKALQSVEEDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQ
GGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKIAATQGPAADRELLGQKFWMS