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Lag0012107 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012107
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr1:37401012..37401434
RNA-Seq ExpressionLag0012107
SyntenyLag0012107
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064635.1 hypothetical protein E6C27_scaffold255G003590 [Cucumis melo var. makuwa]5.4e-1844.72Show/hide
Query:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKP--PTVVRTNKSNGDSE------PSSQF--------KISSPTTVALSPTKSARVEMLKAKFSGTILKAQ
        M+MMQ K++ +++RF    KV+ +KVTT        + +T KSN + E      PSS+         K +  T + LSP ++ARVEMLK KF  TILKAQ
Subjt:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKP--PTVVRTNKSNGDSE------PSSQF--------KISSPTTVALSPTKSARVEMLKAKFSGTILKAQ

Query:  RALFPNSDIDCNI------PTPKTCSIQERRRASREALDKVKLTTDLNANLDAMREFQKLI
        + L   S+ D NI        PK CSIQE+RRASRE+LDK+K   D N NLD+MR+F++L+
Subjt:  RALFPNSDIDCNI------PTPKTCSIQERRRASREALDKVKLTTDLNANLDAMREFQKLI

KAE8647905.1 hypothetical protein Csa_000421, partial [Cucumis sativus]2.6e-2047.2Show/hide
Query:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKPPTVVRTNKSNGDSEPSSQFKISSP--------------TTVALSPTKSARVEMLKAKFSGTILKAQRA
        MKMMQTK++ +       PKV+ +KVTT  KP  + +  +S  D E  + FK  SP              T V LSP ++ARVE+LKAKF  TILKAQ+ 
Subjt:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKPPTVVRTNKSNGDSEPSSQFKISSP--------------TTVALSPTKSARVEMLKAKFSGTILKAQRA

Query:  LFPNSDIDCNI-------PTPKTCSI-QERRRASREALDKVKLTTDLNANLDAMREFQKLI
        L  NS+ D N         TPKTCSI QE++RASREALDK+    D N NLD+MREF+K++
Subjt:  LFPNSDIDCNI-------PTPKTCSI-QERRRASREALDKVKLTTDLNANLDAMREFQKLI

KAG6589050.1 hypothetical protein SDJN03_17615, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1642.31Show/hide
Query:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKPPTVVRTNKSNGDSEPSSQFKISSPTTVA--LSPTKSARVEMLKAKFSGTILKAQRAL-----------
        M+MMQTK++  ++  SS+  V+ S VTT  +P    RTN SNGDS+P S FK     T A   SPTK+ARVEMLK KFS TI KAQ+AL           
Subjt:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKPPTVVRTNKSNGDSEPSSQFKISSPTTVA--LSPTKSARVEMLKAKFSGTILKAQRAL-----------

Query:  ----------------FPN--------------SDIDCNIPTPKTCSIQERRRASREALDKVKLTTDLNANLDAMREFQKLI
                         PN              S I+    +PK  S++E+RRASREALD VK T + N NLD M+EF+ L+
Subjt:  ----------------FPN--------------SDIDCNIPTPKTCSIQERRRASREALDKVKLTTDLNANLDAMREFQKLI

KGN61401.2 hypothetical protein Csa_006690, partial [Cucumis sativus]4.4e-2046.58Show/hide
Query:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKPPTVVRTNKSNGDSEPSSQFKISSP--------------TTVALSPTKSARVEMLKAKFSGTILKAQRA
        MKMMQTK++ +       PKV+ +KVTT  KP  + +  +SN D E  + FK  SP              T V LSP ++ARVE+LKAKF  TILKAQ+ 
Subjt:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKPPTVVRTNKSNGDSEPSSQFKISSP--------------TTVALSPTKSARVEMLKAKFSGTILKAQRA

Query:  LFPNSDIDCNI-------PTPKTCSI-QERRRASREALDKVKLTTDLNANLDAMREFQKLI
        L  NS+ D N         TPK CSI QE++RASREALDK+    + N NLD+MREF+K++
Subjt:  LFPNSDIDCNI-------PTPKTCSI-QERRRASREALDKVKLTTDLNANLDAMREFQKLI

TYK19957.1 hypothetical protein E5676_scaffold134G00700 [Cucumis melo var. makuwa]5.4e-1843.48Show/hide
Query:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKP--PTVVRTNKSNGDSE--------------PSSQFKISSPTTVALSPTKSARVEMLKAKFSGTILKAQ
        M+MMQ K++ +++RF    KV+ +KVTT        + +T KSN + E              P+   K +  T + LSP ++ARVEMLK KF  TILKAQ
Subjt:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKP--PTVVRTNKSNGDSE--------------PSSQFKISSPTTVALSPTKSARVEMLKAKFSGTILKAQ

Query:  RALFPNSDIDCNI------PTPKTCSIQERRRASREALDKVKLTTDLNANLDAMREFQKLI
        + L   S+ D NI        PK CSIQE+RRASRE+LDK+K   D N NLD+MR+F++L+
Subjt:  RALFPNSDIDCNI------PTPKTCSIQERRRASREALDKVKLTTDLNANLDAMREFQKLI

TrEMBL top hitse value%identityAlignment
A0A0A0KMZ1 Uncharacterized protein3.8e-1745.62Show/hide
Query:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKPPTVVRTNKSNGDSEPSSQFKISSP--------------TTVALSPTKSARVEMLKAKFSGTILKAQRA
        M+MMQTK++ I       PKV+ +KVT   KP  + +  +SNGD E  + FK  SP              T V LSP ++ARVE+LKAKF  TI KAQ+ 
Subjt:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKPPTVVRTNKSNGDSEPSSQFKISSP--------------TTVALSPTKSARVEMLKAKFSGTILKAQRA

Query:  LFPNSDIDCNI-------PTPKTCSI-QERRRASREALDK-VKLTTDLNANLDAMREFQK
        L   S+ D N         TPKTCSI QE++RASREALDK +    D N NLD+M+EF++
Subjt:  LFPNSDIDCNI-------PTPKTCSI-QERRRASREALDK-VKLTTDLNANLDAMREFQK

A0A0A0KRB6 Uncharacterized protein8.6e-1446.83Show/hide
Query:  PPTVVRTNKSNGDSEPSSQFKISSP------------TTVALSPTKSARVEMLKAKFSGTILKAQRALFPNSDIDCNI------PTPKTCSIQERRRASR
        P  + +  +SN D +  + FK  SP            T V LSP ++ARVE+LKAKF  TILKAQ+ L  NS+ D N        TP  CSIQE+R+A R
Subjt:  PPTVVRTNKSNGDSEPSSQFKISSP------------TTVALSPTKSARVEMLKAKFSGTILKAQRALFPNSDIDCNI------PTPKTCSIQERRRASR

Query:  EALDKVKLTTDLNANLDAMREFQKLI
        EALDK+    D N NLD+MREF KL+
Subjt:  EALDKVKLTTDLNANLDAMREFQKLI

A0A5A7VFH7 Uncharacterized protein2.6e-1844.72Show/hide
Query:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKP--PTVVRTNKSNGDSE------PSSQF--------KISSPTTVALSPTKSARVEMLKAKFSGTILKAQ
        M+MMQ K++ +++RF    KV+ +KVTT        + +T KSN + E      PSS+         K +  T + LSP ++ARVEMLK KF  TILKAQ
Subjt:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKP--PTVVRTNKSNGDSE------PSSQF--------KISSPTTVALSPTKSARVEMLKAKFSGTILKAQ

Query:  RALFPNSDIDCNI------PTPKTCSIQERRRASREALDKVKLTTDLNANLDAMREFQKLI
        + L   S+ D NI        PK CSIQE+RRASRE+LDK+K   D N NLD+MR+F++L+
Subjt:  RALFPNSDIDCNI------PTPKTCSIQERRRASREALDKVKLTTDLNANLDAMREFQKLI

A0A5D3D8Q3 Uncharacterized protein2.6e-1843.48Show/hide
Query:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKP--PTVVRTNKSNGDSE--------------PSSQFKISSPTTVALSPTKSARVEMLKAKFSGTILKAQ
        M+MMQ K++ +++RF    KV+ +KVTT        + +T KSN + E              P+   K +  T + LSP ++ARVEMLK KF  TILKAQ
Subjt:  MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKP--PTVVRTNKSNGDSE--------------PSSQFKISSPTTVALSPTKSARVEMLKAKFSGTILKAQ

Query:  RALFPNSDIDCNI------PTPKTCSIQERRRASREALDKVKLTTDLNANLDAMREFQKLI
        + L   S+ D NI        PK CSIQE+RRASRE+LDK+K   D N NLD+MR+F++L+
Subjt:  RALFPNSDIDCNI------PTPKTCSIQERRRASREALDKVKLTTDLNANLDAMREFQKLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGATGCAAACGAAAAAGAAAATTATAAGTAATCGTTTTTCAAGTGATCCCAAGGTCATTCCGAGCAAAGTGACAACCATCTTCAAACCGCCTACCGTT
GTCCGAACCAACAAATCTAATGGTGATTCTGAACCATCGTCTCAATTCAAAATTTCATCACCAACAACTGTTGCTCTATCACCCACAAAATCTGCTCGAGTAGAA
ATGTTGAAAGCCAAATTTTCTGGGACCATTTTGAAAGCTCAACGAGCACTTTTTCCAAATTCCGATATTGATTGTAATATTCCTACTCCAAAGACATGTTCTATA
CAAGAACGAAGACGAGCTTCAAGAGAAGCTCTAGACAAGGTCAAACTGACGACTGATTTGAACGCAAATCTTGATGCTATGAGAGAGTTTCAAAAATTAATTGGA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGATGCAAACGAAAAAGAAAATTATAAGTAATCGTTTTTCAAGTGATCCCAAGGTCATTCCGAGCAAAGTGACAACCATCTTCAAACCGCCTACCGTT
GTCCGAACCAACAAATCTAATGGTGATTCTGAACCATCGTCTCAATTCAAAATTTCATCACCAACAACTGTTGCTCTATCACCCACAAAATCTGCTCGAGTAGAA
ATGTTGAAAGCCAAATTTTCTGGGACCATTTTGAAAGCTCAACGAGCACTTTTTCCAAATTCCGATATTGATTGTAATATTCCTACTCCAAAGACATGTTCTATA
CAAGAACGAAGACGAGCTTCAAGAGAAGCTCTAGACAAGGTCAAACTGACGACTGATTTGAACGCAAATCTTGATGCTATGAGAGAGTTTCAAAAATTAATTGGA
TAA
Protein sequenceShow/hide protein sequence
MKMMQTKKKIISNRFSSDPKVIPSKVTTIFKPPTVVRTNKSNGDSEPSSQFKISSPTTVALSPTKSARVEMLKAKFSGTILKAQRALFPNSDIDCNIPTPKTCSI
QERRRASREALDKVKLTTDLNANLDAMREFQKLIG