; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012113 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012113
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr1:37485580..37486182
RNA-Seq ExpressionLag0012113
SyntenyLag0012113
Gene Ontology termsGO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601809.1 hypothetical protein SDJN03_07042, partial [Cucurbita argyrosperma subsp. sororia]9.4e-1645Show/hide
Query:  LKIENKFFSCCFDRNYKGRVVRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLVI
        +KIEN+ FSC F     G   +I+E+H  R   ++ EE++  W  D +EDLLLAP + + FRK  CN  FIW+ +I NKRGSF+++TKV ++ GK  L +
Subjt:  LKIENKFFSCCFDRNYKGRVVRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLVI

PQQ12339.1 hypothetical protein Pyn_11880 [Prunus yedoensis var. nudiflora]9.4e-0830.77Show/hide
Query:  KIENKFFSCCFDRNYKGRVVRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKA-NLVI
        +IE+K FS   D   +G  + I E+ R + S +S E   +VW+ + + D L     Q FFR+   ++   W+++  N +G FL+++K    RG   +LVI
Subjt:  KIENKFFSCCFDRNYKGRVVRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKA-NLVI

Query:  PAGVDFKGWKGFSNLLKDFLNGEDTHSIHSNETAIDRKRNEGKSYAEAVKRNRQVK
        P G +  GW+     L   LN     S   +     R R+   SY +AVK + +V+
Subjt:  PAGVDFKGWKGFSNLLKDFLNGEDTHSIHSNETAIDRKRNEGKSYAEAVKRNRQVK

XP_028076003.1 transcription factor Pur-alpha 1-like [Camellia sinensis]3.2e-0828.26Show/hide
Query:  GHRTCSLKIENKFFSCCFDRNYKGRVVRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARG
        G     L+IE+K  +   D  ++G  V I E +R R   +  +   + W   ++  +    S + FF K   +    WIQK+ NK G F +I+K      
Subjt:  GHRTCSLKIENKFFSCCFDRNYKGRVVRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARG

Query:  KANLVIPAGVDFKGWKGFSNLLKDFLNGEDTHSIHSNE
        + N++IPAGVD  GW+  + +L+  + G+   +    E
Subjt:  KANLVIPAGVDFKGWKGFSNLLKDFLNGEDTHSIHSNE

XP_031737554.1 transcription factor Pur-alpha 1-like [Cucumis sativus]3.8e-3352.99Show/hide
Query:  SLKIENKFFSCCFDRNYKGRVVRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLV
        S KIENK FSC FD N +GRV+R+ E H  +   L  EE +  W+++S+E++L     QKFFRK+ CN GF WIQK +NKRGSFL+I+KV+ +  K N+V
Subjt:  SLKIENKFFSCCFDRNYKGRVVRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLV

Query:  IPAGVDFKGWKGFSNLLKDFLNGE-DTHSIHSNE
        +PAGVD KGW+ F  LL DFLN E D+ ++HS +
Subjt:  IPAGVDFKGWKGFSNLLKDFLNGE-DTHSIHSNE

XP_041001761.1 transcription factor Pur-alpha 1-like [Juglans microcarpa x Juglans regia]3.2e-0832.2Show/hide
Query:  SLKIENKFFSCCFDRNYKGRVVRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLV
        S  +E+K F         G   RI E +RK    L        W++  +E+ L++  +  FFRK    NG +++Q+ +N RG FL + +  N R + +L+
Subjt:  SLKIENKFFSCCFDRNYKGRVVRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLV

Query:  IPAGVDFKGWKGFSNLLK
        +P GV   GW+GF+  LK
Subjt:  IPAGVDFKGWKGFSNLLK

TrEMBL top hitse value%identityAlignment
A0A0A0L427 Uncharacterized protein3.2e-2243.9Show/hide
Query:  RIQEEHRKRKSAL------SAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLVIPAGVDFKGWKGFSNL
        ++ +  +KRK  +        EE++ VW+ DS+E++L  P + KFFR++ CN GF WIQ+ +NKRGSFL+I+KV+ +  K N+V+PAG+D KGW+ F  L
Subjt:  RIQEEHRKRKSAL------SAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLVIPAGVDFKGWKGFSNL

Query:  LKDFLNGE-DTHSIHSNETAIDR
        L DFLN E +  + HS +  I +
Subjt:  LKDFLNGE-DTHSIHSNETAIDR

A0A2N9FX72 Reverse transcriptase domain-containing protein1.3e-0730.77Show/hide
Query:  VRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLVIPAGVDFKGWKGFSNLLKDFL
        V I E  RK  S +S       W+ DS+ ++    + Q  FR     N    +QK  N RGSF+ IT + +++G+  ++IP G D  GW+G S  L+  L
Subjt:  VRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLVIPAGVDFKGWKGFSNLLKDFL

Query:  NGE------DTH--SIHSNETAIDRKRNEGKSYAEAVKRNRQV
        N        D H   +    T + + RNE  ++  AV + R +
Subjt:  NGE------DTH--SIHSNETAIDRKRNEGKSYAEAVKRNRQV

A0A2N9H4N7 DNA-directed RNA polymerase2.9e-0730.77Show/hide
Query:  VRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLVIPAGVDFKGWKGFSNLLKDFL
        V I E  RK  S +S    +  W  DS+ ++    + Q  FR     N    +QK  N RGSF+ +T + +++G+  ++IP G D  GW+G S  L+  L
Subjt:  VRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLVIPAGVDFKGWKGFSNLLKDFL

Query:  N------GEDTHSIH--SNETAIDRKRNEGKSYAEAVKRNRQV
        N        D H     S  T +   RNE  ++  AV + R++
Subjt:  N------GEDTHSIH--SNETAIDRKRNEGKSYAEAVKRNRQV

A0A2N9I2C8 Reverse transcriptase domain-containing protein1.6e-0830.77Show/hide
Query:  VRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLVIPAGVDFKGWKGFSNLLKDFL
        V I E  RK +S +S      VW+ DS+ ++    +++  FR     N    +QK  N RGSF+ +T + +++GK  ++IPAG +  GW+G S  L   L
Subjt:  VRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLVIPAGVDFKGWKGFSNLLKDFL

Query:  N-------GEDTHSIHSNETAIDRK-RNEGKSYAEAVKRNRQV
        N       G+     H+ +T +    RNE  S+  AV + + +
Subjt:  N-------GEDTHSIHSNETAIDRK-RNEGKSYAEAVKRNRQV

A0A2N9IDT8 Reverse transcriptase domain-containing protein3.8e-0730.57Show/hide
Query:  VRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLVIPAGVDFKGWKGFSNLLKDFL
        V I E  RK  S +S       W  DS+ ++    + Q  FR     N    +QK  N RGSF+ IT + +++G+  ++IP G D  GW+G S  L+  L
Subjt:  VRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLVIPAGVDFKGWKGFSNLLKDFL

Query:  NGEDTHSIH---------SNETAIDRKRNEGKSYAEAVKRNRQVKSPSAYPRHQKEE
        N  D   IH         S  T +   R E  ++  AV + R +  P   P +  +E
Subjt:  NGEDTHSIH---------SNETAIDRKRNEGKSYAEAVKRNRQVKSPSAYPRHQKEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGGACATAGGACATGTAGTCTGAAGATTGAAAACAAGTTCTTCTCGTGTTGCTTTGACAGAAATTACAAAGGAAGGGTAGTTAGAATTCAAGAAGAGCACCGTAA
GAGAAAATCTGCCCTGTCCGCTGAGGAAGTGATATTGGTGTGGATATCAGACTCAATAGAAGACCTCTTGCTCGCGCCATCCACCCAAAAATTCTTTCGAAAATCTGACT
GTAACAATGGCTTTATTTGGATACAGAAAATTTCGAACAAAAGAGGAAGCTTCCTCAAGATCACGAAGGTAATGAACGCAAGAGGAAAGGCTAACCTGGTAATCCCAGCT
GGGGTGGATTTCAAAGGATGGAAAGGATTCTCAAATCTATTAAAAGACTTCCTCAATGGGGAGGACACCCACTCGATACATTCCAACGAAACAGCTATTGATAGAAAACG
GAACGAAGGAAAGTCATATGCTGAAGCGGTTAAAAGAAACAGGCAAGTCAAGTCCCCATCTGCCTACCCAAGGCACCAAAAAGAAGAAGGATTGTTCTTACCTTTTTTGG
AGCCAAAAGGCAATAAGGGAGCGGTAGGAAAATCGACTGGGACCAGACTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCGGACATAGGACATGTAGTCTGAAGATTGAAAACAAGTTCTTCTCGTGTTGCTTTGACAGAAATTACAAAGGAAGGGTAGTTAGAATTCAAGAAGAGCACCGTAA
GAGAAAATCTGCCCTGTCCGCTGAGGAAGTGATATTGGTGTGGATATCAGACTCAATAGAAGACCTCTTGCTCGCGCCATCCACCCAAAAATTCTTTCGAAAATCTGACT
GTAACAATGGCTTTATTTGGATACAGAAAATTTCGAACAAAAGAGGAAGCTTCCTCAAGATCACGAAGGTAATGAACGCAAGAGGAAAGGCTAACCTGGTAATCCCAGCT
GGGGTGGATTTCAAAGGATGGAAAGGATTCTCAAATCTATTAAAAGACTTCCTCAATGGGGAGGACACCCACTCGATACATTCCAACGAAACAGCTATTGATAGAAAACG
GAACGAAGGAAAGTCATATGCTGAAGCGGTTAAAAGAAACAGGCAAGTCAAGTCCCCATCTGCCTACCCAAGGCACCAAAAAGAAGAAGGATTGTTCTTACCTTTTTTGG
AGCCAAAAGGCAATAAGGGAGCGGTAGGAAAATCGACTGGGACCAGACTATAG
Protein sequenceShow/hide protein sequence
MVGHRTCSLKIENKFFSCCFDRNYKGRVVRIQEEHRKRKSALSAEEVILVWISDSIEDLLLAPSTQKFFRKSDCNNGFIWIQKISNKRGSFLKITKVMNARGKANLVIPA
GVDFKGWKGFSNLLKDFLNGEDTHSIHSNETAIDRKRNEGKSYAEAVKRNRQVKSPSAYPRHQKEEGLFLPFLEPKGNKGAVGKSTGTRL