CuGenDBv2

Gene ID	Lag0012120
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic-like
Genome location	chr1:37542871..37544877
RNA-Seq Expression	Lag0012120
Synteny	Lag0012120
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022154495.1 uncharacterized protein LOC111021761 isoform X1 [Momordica charantia]

8.6e-61

88.57

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Query:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI
        MDSATLTVSSS ILRNSSQKLLP  KIQAG+CF R +FSKIFAVYPNGSA  SA GQGDSSAA+VHRR STFESLFCYDKAIPEERIE PVGISLAEK+I
Subjt:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI

Query:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV
        GDNPRCTDCHAKGAVLCTTCSG GLYVD+ILESQGIIVKV
Subjt:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV

XP_022154496.1 uncharacterized protein LOC111021761 isoform X2 [Momordica charantia]

8.1e-59

87.86

Show/hide

Query:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI
        MDSATLTVSSS ILRNSSQKLLP  KIQAG+CF R +FSKIFAVYPNGSA  SA G GDSSAA+VHRR STFESLFCYDKAIPEERIE PVGISLAEK+I
Subjt:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI

Query:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV
        GDNPRCTDCHAKGAVLCTTCSG GLYVD+ILESQGIIVKV
Subjt:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV

XP_022978300.1 uncharacterized protein LOC111478329 [Cucurbita maxima]

2.2e-64

79.41

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Query:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI
        MDS++LT+SSS I RNS+QKLL   KIQ G+CFER+KFSKIFAVYPN    GSASG GD SAA+VHR+ S FESLFCYDKAIPEE IE PVGISLAEKMI
Subjt:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI

Query:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKVAVELAISCVQNVVAVVTWDWVLNELQRLLS
        GDNPRCTDCHAKGAVLCTTCSG GLYVDSILESQGIIVKV VEL I CVQN   VVTWD  LNE QRL+S
Subjt:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKVAVELAISCVQNVVAVVTWDWVLNELQRLLS

XP_023543495.1 uncharacterized protein LOC111803362 [Cucurbita pepo subsp. pepo]

2.4e-63

78.82

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Query:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI
        MDS +LT+SSS I RNSSQ LL   KIQ G+CFER+KFSKIFAVYPN    GSASG GD SAA+VHR+ S FESLFCYDKAIPEE IE PVGISLAEKMI
Subjt:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI

Query:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKVAVELAISCVQNVVAVVTWDWVLNELQRLLS
        GDNPRCTDCHAKGAVLCTTCSG GLYVDSILESQGIIVKV VEL I CVQN   +VTWD  LNE QRL+S
Subjt:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKVAVELAISCVQNVVAVVTWDWVLNELQRLLS

XP_038881865.1 uncharacterized protein LOC120073222 isoform X1 [Benincasa hispida]

2.9e-56

84.29

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Query:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI
        MDSATLT+SSS ILRNSSQKLL + KIQ G+CF R+KFSKI AVYPN    GSASGQGDSS A+VHRR S+FESLFCYDKAIPEERIETPVGISLAE+MI
Subjt:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI

Query:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV
        GDNPRCTDCHAKG VLC TCSG GLYVDSILESQGIIVKV
Subjt:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DJS1 uncharacterized protein LOC111021761 isoform X1

4.2e-61

88.57

Show/hide

Query:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI
        MDSATLTVSSS ILRNSSQKLLP  KIQAG+CF R +FSKIFAVYPNGSA  SA GQGDSSAA+VHRR STFESLFCYDKAIPEERIE PVGISLAEK+I
Subjt:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI

Query:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV
        GDNPRCTDCHAKGAVLCTTCSG GLYVD+ILESQGIIVKV
Subjt:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV

A0A6J1DNW0 uncharacterized protein LOC111021761 isoform X2

3.9e-59

87.86

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Query:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI
        MDSATLTVSSS ILRNSSQKLLP  KIQAG+CF R +FSKIFAVYPNGSA  SA G GDSSAA+VHRR STFESLFCYDKAIPEERIE PVGISLAEK+I
Subjt:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI

Query:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV
        GDNPRCTDCHAKGAVLCTTCSG GLYVD+ILESQGIIVKV
Subjt:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV

A0A6J1EE35 uncharacterized protein LOC111432397

2.4e-53

80.71

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Query:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI
        MDSATL VSSS I+R+SS KL  S +IQA +CFER KFSKIFAVYPNGSA      +GDSS A+VHRR ST E+LFCYDKAIPEERIETPVGISLAEKMI
Subjt:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI

Query:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV
        GDNPRC++CHAKGAVLCTTCSG GLYVDSILESQGIIVKV
Subjt:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV

A0A6J1GFH6 uncharacterized protein LOC111453701

1.4e-53

81.43

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Query:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI
        MDS++LT+SSS I RNSSQKLL   KIQ G+CF+R+KFSKIFAVYPN    GSASG  D SAA+VHR+ S FESLFCYDKAIPEE IE PVGISLAEKMI
Subjt:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI

Query:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV
        GDNPRCTDCHAKGAVLCTTCSG GLYVDSILESQGIIVKV
Subjt:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV

A0A6J1IPP7 uncharacterized protein LOC111478329

1.1e-64

79.41

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Query:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI
        MDS++LT+SSS I RNS+QKLL   KIQ G+CFER+KFSKIFAVYPN    GSASG GD SAA+VHR+ S FESLFCYDKAIPEE IE PVGISLAEKMI
Subjt:  MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMI

Query:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKVAVELAISCVQNVVAVVTWDWVLNELQRLLS
        GDNPRCTDCHAKGAVLCTTCSG GLYVDSILESQGIIVKV VEL I CVQN   VVTWD  LNE QRL+S
Subjt:  GDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKVAVELAISCVQNVVAVVTWDWVLNELQRLLS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G17840.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein

3.5e-28

72.73

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Query:  EVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV
        +VHR+ S+ ES+FCYDK IPEE IE PVG+S++E+ IGDN RCT C AKGA+LC+TCSG GLYVDSI+ESQGIIVKV
Subjt:  EVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMIGDNPRCTDCHAKGAVLCTTCSGLGLYVDSILESQGIIVKV

Sequences

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CDS sequence

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ATGGATTCAGCTACTTTAACCGTGTCATCATCTGCCATTTTGCGTAATTCATCGCAGAAATTACTTCCGAGTACAAAGATTCAAGCAGGGATATGTTTCGAAAGGAGCAA
GTTCTCCAAGATCTTCGCGGTCTATCCCAATGGCTCCGCTTGCGGCTCTGCTTCTGGGCAGGGGGATTCTTCAGCTGCAGAGGTTCACAGACGACTAAGTACTTTTGAAT
CTTTGTTTTGCTATGATAAGGCTATCCCAGAGGAAAGAATTGAGACACCCGTTGGAATATCTCTGGCAGAGAAAATGATTGGTGATAATCCCCGTTGCACTGATTGTCAT
GCCAAAGGTGCTGTCCTTTGCACAACTTGCTCCGGTTTGGGCTTGTATGTCGACTCAATATTGGAGAGCCAGGGAATCATTGTAAAAGTTGCGGTGGAACTGGCAATATC
ATGTGTTCAGAATGTGGTGGCCGTGGTCACCTGGGACTGGGTTCTCAATGAGTTGCAAAGACTCCTTTCTGAAGGATTCTTCTTGAACTGTCGCGGACTGTAA

mRNA sequence

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Protein sequence

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MDSATLTVSSSAILRNSSQKLLPSTKIQAGICFERSKFSKIFAVYPNGSACGSASGQGDSSAAEVHRRLSTFESLFCYDKAIPEERIETPVGISLAEKMIGDNPRCTDCH
AKGAVLCTTCSGLGLYVDSILESQGIIVKVAVELAISCVQNVVAVVTWDWVLNELQRLLSEGFFLNCRGL

Lag0012120 (gene) of Sponge gourd (AG-4) v1 genome