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Lag0012169 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012169
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:38186514..38186948
RNA-Seq ExpressionLag0012169
SyntenyLag0012169
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG53848.1 hypothetical protein EZV62_019104 [Acer yangbiense]5.5e-1036.45Show/hide
Query:  ELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDN
        E+ +  E LSL + E   + ++ EED +E   +  +    KILS + VN+E F+  I ++W   GRV +E  G+N+++  F NQ ++NR+ + GPW FD 
Subjt:  ELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDN

Query:  SLLVFDE
        SL+V ++
Subjt:  SLLVFDE

TXG57139.1 hypothetical protein EZV62_018452 [Acer yangbiense]1.6e-0933.64Show/hide
Query:  ELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDN
        E+ +  EKLS+ +++   + ++ EED  E   +  +    KI+S +  N+E F + I ++W   GRV +E  G+N+++  F NQ ++NR+   GPW FDN
Subjt:  ELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDN

Query:  SLLVFDE
        SL+  ++
Subjt:  SLLVFDE

TXG57799.1 hypothetical protein EZV62_015628 [Acer yangbiense]2.1e-0936.7Show/hide
Query:  TKELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSF
        T E+ +  E+LS++++++  V +I EEDI++   D       ++LS + VN++ F   I +IW   G+V VE  G N ++  F N+ D+NRV   GPW F
Subjt:  TKELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSF

Query:  DNSLLVFDE
         NSL+V ++
Subjt:  DNSLLVFDE

TXG70236.1 hypothetical protein EZV62_005171 [Acer yangbiense]2.7e-0944.78Show/hide
Query:  KILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDNSLLVFDE
        KILS + VN+E FM+ + +IW ++GR+ +E    N++  +F +  DK  V  GGPWSFDN+L++F+E
Subjt:  KILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDNSLLVFDE

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]1.2e-0933.02Show/hide
Query:  LEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDNS
        L  Q+E+L L ++EK  +  + E++I++ ++       CK+L+ + +  E+F + +PRIW +   V +E  G N++LCKF   RDK+++   GP  FD S
Subjt:  LEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDNS

Query:  LLVFDE
        +++ +E
Subjt:  LLVFDE

TrEMBL top hitse value%identityAlignment
A0A5C7H421 CCHC-type domain-containing protein2.3e-0935.64Show/hide
Query:  EKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDNSLLVFD
        E LSL + E   + ++ EED ++   +  +    KILS++ VN+E F + I ++W   G V +E  G+N+++  F NQ ++NR+ + GPW FD SL+V +
Subjt:  EKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDNSLLVFD

Query:  E
        +
Subjt:  E

A0A5C7HA35 CCHC-type domain-containing protein3.9e-0935.19Show/hide
Query:  KELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFD
        +E+    E LSL+E +   +  +EE+   E  +D + +   K+L+ R VN+E F+  I ++W   GRV  E  G N+++  F N  D+NR+ + GPW FD
Subjt:  KELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFD

Query:  NSLLVFDE
        NSL+  ++
Subjt:  NSLLVFDE

A0A5C7HA62 DUF4283 domain-containing protein2.7e-1036.45Show/hide
Query:  ELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDN
        E+ +  E LSL + E   + ++ EED +E   +  +    KILS + VN+E F+  I ++W   GRV +E  G+N+++  F NQ ++NR+ + GPW FD 
Subjt:  ELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDN

Query:  SLLVFDE
        SL+V ++
Subjt:  SLLVFDE

A0A5C7HK10 CCHC-type domain-containing protein7.8e-1033.64Show/hide
Query:  ELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDN
        E+ +  EKLS+ +++   + ++ EED  E   +  +    KI+S +  N+E F + I ++W   GRV +E  G+N+++  F NQ ++NR+   GPW FDN
Subjt:  ELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSFDN

Query:  SLLVFDE
        SL+  ++
Subjt:  SLLVFDE

A0A5C7HLY4 CCHC-type domain-containing protein1.0e-0936.7Show/hide
Query:  TKELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSF
        T E+ +  E+LS++++++  V +I EEDI++   D       ++LS + VN++ F   I +IW   G+V VE  G N ++  F N+ D+NRV   GPW F
Subjt:  TKELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAGMNVYLCKFGNQRDKNRVTKGGPWSF

Query:  DNSLLVFDE
         NSL+V ++
Subjt:  DNSLLVFDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGGAAGGGCAACACCCGGTTTGCTCGAAGGGATCCAAAGGTGATCAGAGTATGGCTACTGAGCATGAGAACGATGCGAGACGGGAAGGAGAATCTCAAACAAA
GGAGCTAGAGGAGCAAATAGAGAAACTTAGTTTGATAGAACAAGAGAAACGAAGAGTGGTTAAGATCGAAGAGGAAGACATCAAAGAAACAAATAGAGATTTTACAATGA
TGAGAGCCTGCAAGATCCTATCCAATAGGATAGTCAACCAAGAGATGTTTATGAGCAAGATACCAAGAATATGGGGCCTGGAAGGGAGAGTGGTCGTAGAAAAGGCAGGA
ATGAATGTTTACCTTTGTAAATTTGGAAATCAAAGAGACAAAAACAGAGTCACCAAAGGGGGACCCTGGAGCTTTGACAACAGCCTACTTGTCTTCGATGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAGGAAGGGCAACACCCGGTTTGCTCGAAGGGATCCAAAGGTGATCAGAGTATGGCTACTGAGCATGAGAACGATGCGAGACGGGAAGGAGAATCTCAAACAAA
GGAGCTAGAGGAGCAAATAGAGAAACTTAGTTTGATAGAACAAGAGAAACGAAGAGTGGTTAAGATCGAAGAGGAAGACATCAAAGAAACAAATAGAGATTTTACAATGA
TGAGAGCCTGCAAGATCCTATCCAATAGGATAGTCAACCAAGAGATGTTTATGAGCAAGATACCAAGAATATGGGGCCTGGAAGGGAGAGTGGTCGTAGAAAAGGCAGGA
ATGAATGTTTACCTTTGTAAATTTGGAAATCAAAGAGACAAAAACAGAGTCACCAAAGGGGGACCCTGGAGCTTTGACAACAGCCTACTTGTCTTCGATGAGTGA
Protein sequenceShow/hide protein sequence
MDEEGQHPVCSKGSKGDQSMATEHENDARREGESQTKELEEQIEKLSLIEQEKRRVVKIEEEDIKETNRDFTMMRACKILSNRIVNQEMFMSKIPRIWGLEGRVVVEKAG
MNVYLCKFGNQRDKNRVTKGGPWSFDNSLLVFDE