; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012187 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012187
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGlutamate receptor
Genome locationchr1:38481890..38487216
RNA-Seq ExpressionLag0012187
SyntenyLag0012187
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]2.7e-4643.28Show/hide
Query:  MTNISYTIPSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-----------------------------
        M N   T    ++ +  FS+PPLNQ+LNQ+ T+KLDR N+LLWK L +PIL  YKLEGHL G  PCP  ++                             
Subjt:  MTNISYTIPSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-----------------------------

Query:  -----------------------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLV
                                 +VA Q+MG  N  DLW A ++ FGVQSR EEDFLRQ  Q TRKGN KM +YL +MK + DNLG  GSP+  R L+
Subjt:  -----------------------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLV

Query:  SQVLLGLDEEYNAIVAMIQGRSSVLWAELQAELLVFEK
        SQVLLGLDE YN ++ +IQG+  + W ++Q++LL+FEK
Subjt:  SQVLLGLDEEYNAIVAMIQGRSSVLWAELQAELLVFEK

TYJ96311.1 uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa]3.4e-3341.58Show/hide
Query:  MTNISYTIPSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-----------------------------
        M N   T    ++ +  FS+PPLNQ+LNQ+ T+KLDR N+LLWK L +PIL  YKLEGHL G  PCP  ++                             
Subjt:  MTNISYTIPSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-----------------------------

Query:  -----------------------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLV
                                 +VA Q+MG  N  DLW A ++ FGVQSR EEDFLRQ  Q TRKGN KM +YL +MK + DNLG  GSP+  R L+
Subjt:  -----------------------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLV

Query:  SQ
        SQ
Subjt:  SQ

XP_022148963.1 uncharacterized protein LOC111017501 [Momordica charantia]1.5e-3672.9Show/hide
Query:  EVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAIVAMIQGRSSVL
        EVATQVMG ENA DLW AI+ELFGVQS+ EED+LRQ FQQTRKG++KMTD+LR+MK+HADNLG AGSP+  R+L+SQVLLGLDEEYN +VA IQG+  + 
Subjt:  EVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAIVAMIQGRSSVL

Query:  WAELQAE
        W E+QAE
Subjt:  WAELQAE

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]2.8e-5150.23Show/hide
Query:  PSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-------------------------------------
        P   V    F+SPPLNQLLNQIT+IK+DRGNFLLW+NL +PIL SYKL  +L G KPCPPT++                                     
Subjt:  PSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-------------------------------------

Query:  ------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAIVAM
                +VA QVMG   + +LW A++ELFGVQSR E D+L+Q FQQT KG+++M +YL+LMK+HADNL LAGS +S R+LVSQVL GLDEEYN IV  
Subjt:  ------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAIVAM

Query:  IQGRSSVLWAELQAELLVFEK
        +QG+ ++ W+E+ AELL +EK
Subjt:  IQGRSSVLWAELQAELLVFEK

XP_038902487.1 uncharacterized protein LOC120089143 [Benincasa hispida]6.3e-4346.43Show/hide
Query:  TTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPP--------------------------------------------------------------
        TTIKLD+ N+LLW+NL +PIL SY+LEGHL G  PCPP                                                              
Subjt:  TTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPP--------------------------------------------------------------

Query:  ------TYIRQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAI
               ++  EVA QVMG EN   LW AI+ELFG+QSR  ED+LRQ FQQT KG MKM +YLR+MK H+DNLGL GSP+  R LVSQVLLGLDEE+N  
Subjt:  ------TYIRQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAI

Query:  VAMIQGRSSVLWAELQAELLVFEK
        VA IQGRS + W  +Q ELL FEK
Subjt:  VAMIQGRSSVLWAELQAELLVFEK

TrEMBL top hitse value%identityAlignment
A0A5A7SIT7 Uncharacterized protein1.3e-4643.28Show/hide
Query:  MTNISYTIPSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-----------------------------
        M N   T    ++ +  FS+PPLNQ+LNQ+ T+KLDR N+LLWK L +PIL  YKLEGHL G  PCP  ++                             
Subjt:  MTNISYTIPSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-----------------------------

Query:  -----------------------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLV
                                 +VA Q+MG  N  DLW A ++ FGVQSR EEDFLRQ  Q TRKGN KM +YL +MK + DNLG  GSP+  R L+
Subjt:  -----------------------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLV

Query:  SQVLLGLDEEYNAIVAMIQGRSSVLWAELQAELLVFEK
        SQVLLGLDE YN ++ +IQG+  + W ++Q++LL+FEK
Subjt:  SQVLLGLDEEYNAIVAMIQGRSSVLWAELQAELLVFEK

A0A5A7VPY0 Uncharacterized protein1.2e-3142.57Show/hide
Query:  MTNISYTIPSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-----------------------------
        MTN +  I   A  TT+F++P LNQ+LNQ+TTIKLDRGN+LLWK L +PIL SYKL  HL G  PC P  I                             
Subjt:  MTNISYTIPSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-----------------------------

Query:  ------------------------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNL
                                  EV  Q+MG  NA DLW A ++LFG+QSR +EDFL QTFQ T+KGN+ M +YLR MKN+ +NLG A S + +  +
Subjt:  ------------------------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNL

Query:  VS
        VS
Subjt:  VS

A0A5D3BCH9 Uncharacterized protein1.7e-3341.58Show/hide
Query:  MTNISYTIPSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-----------------------------
        M N   T    ++ +  FS+PPLNQ+LNQ+ T+KLDR N+LLWK L +PIL  YKLEGHL G  PCP  ++                             
Subjt:  MTNISYTIPSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-----------------------------

Query:  -----------------------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLV
                                 +VA Q+MG  N  DLW A ++ FGVQSR EEDFLRQ  Q TRKGN KM +YL +MK + DNLG  GSP+  R L+
Subjt:  -----------------------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLV

Query:  SQ
        SQ
Subjt:  SQ

A0A6J1D5J0 uncharacterized protein LOC1110175017.2e-3772.9Show/hide
Query:  EVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAIVAMIQGRSSVL
        EVATQVMG ENA DLW AI+ELFGVQS+ EED+LRQ FQQTRKG++KMTD+LR+MK+HADNLG AGSP+  R+L+SQVLLGLDEEYN +VA IQG+  + 
Subjt:  EVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAIVAMIQGRSSVL

Query:  WAELQAE
        W E+QAE
Subjt:  WAELQAE

A0A6J1DCW4 uncharacterized protein LOC1110195981.4e-5150.23Show/hide
Query:  PSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-------------------------------------
        P   V    F+SPPLNQLLNQIT+IK+DRGNFLLW+NL +PIL SYKL  +L G KPCPPT++                                     
Subjt:  PSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTKPCPPTYI-------------------------------------

Query:  ------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAIVAM
                +VA QVMG   + +LW A++ELFGVQSR E D+L+Q FQQT KG+++M +YL+LMK+HADNL LAGS +S R+LVSQVL GLDEEYN IV  
Subjt:  ------RQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAIVAM

Query:  IQGRSSVLWAELQAELLVFEK
        +QG+ ++ W+E+ AELL +EK
Subjt:  IQGRSSVLWAELQAELLVFEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)2.2e-0623.72Show/hide
Query:  IKLDRGNFLLWKNLTMPILHSYKLEGHLLGT-------------------KPCPPTYIRQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQ
        + ++  N+  W+ L +    S+ + GH+ GT                        T   ++     +    + D+WL I+  F          L    + 
Subjt:  IKLDRGNFLLWKNLTMPILHSYKLEGHLLGT-------------------KPCPPTYIRQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQ

Query:  TRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAIVAMIQGR
           G+M++ DY R MK  AD+L     P+++RNLV  VL GL+ +++ I+ +I+ R
Subjt:  TRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAIVAMIQGR

AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)2.0e-0727.22Show/hide
Query:  TIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTK-PCPPTYIRQE-----VATQVMGVE-------------NANDLWLAIEELFGVQSRVEEDFLRQTFQ
        T+ L++ N+ +W+ L   +  S+ + GH+ G+  P P T  R +     V   + G                A DLWL++E LF               +
Subjt:  TIKLDRGNFLLWKNLTMPILHSYKLEGHLLGTK-PCPPTYIRQE-----VATQVMGVE-------------NANDLWLAIEELFGVQSRVEEDFLRQTFQ

Query:  QTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAIVAMIQGRS
         T   ++ + +Y + +K+ +D L    SPIS+R LV  +L GL E+Y+ I+ +I+ +S
Subjt:  QTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAIVAMIQGRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAGCTCGAGGAGGAGGAAGGAAATGGAGAGAAAGAAGAGGAAAGGAGGAAGAAGGAAAAAAAAAAGGTTGTCGGTTGCCGGCCGCCGACAACAGTGGTTGT
TGATGGCTGTGATGGCGCTTGGAGAAGAAGGAAAAGAGCGCAGCAAATGACCAACATCTCTTATACAATTCCTTCAATGGCTGTTGGGACTACAACGTTCAGTAGCCCAC
CTCTCAATCAATTGTTGAACCAAATCACCACAATCAAGCTGGATCGTGGAAATTTCCTTCTATGGAAGAACCTGACCATGCCAATACTTCATAGCTACAAGCTTGAGGGT
CACCTACTGGGCACAAAACCGTGTCCTCCGACGTATATTCGTCAAGAAGTAGCAACTCAAGTCATGGGAGTTGAAAACGCTAACGATCTATGGCTGGCTATTGAAGAACT
GTTCGGAGTACAGTCAAGGGTCGAAGAGGATTTTCTTCGCCAAACATTCCAACAAACGAGAAAAGGTAATATGAAAATGACTGATTATCTTCGTTTGATGAAAAATCACG
CTGACAACTTGGGCTTAGCTGGAAGTCCCATTTCAAATAGAAATCTCGTTTCTCAGGTTCTGTTAGGTCTTGATGAAGAATATAATGCCATTGTTGCAATGATACAAGGG
AGATCAAGTGTGTTGTGGGCTGAACTACAAGCAGAGCTTCTTGTGTTTGAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAAGCTCGAGGAGGAGGAAGGAAATGGAGAGAAAGAAGAGGAAAGGAGGAAGAAGGAAAAAAAAAAGGTTGTCGGTTGCCGGCCGCCGACAACAGTGGTTGT
TGATGGCTGTGATGGCGCTTGGAGAAGAAGGAAAAGAGCGCAGCAAATGACCAACATCTCTTATACAATTCCTTCAATGGCTGTTGGGACTACAACGTTCAGTAGCCCAC
CTCTCAATCAATTGTTGAACCAAATCACCACAATCAAGCTGGATCGTGGAAATTTCCTTCTATGGAAGAACCTGACCATGCCAATACTTCATAGCTACAAGCTTGAGGGT
CACCTACTGGGCACAAAACCGTGTCCTCCGACGTATATTCGTCAAGAAGTAGCAACTCAAGTCATGGGAGTTGAAAACGCTAACGATCTATGGCTGGCTATTGAAGAACT
GTTCGGAGTACAGTCAAGGGTCGAAGAGGATTTTCTTCGCCAAACATTCCAACAAACGAGAAAAGGTAATATGAAAATGACTGATTATCTTCGTTTGATGAAAAATCACG
CTGACAACTTGGGCTTAGCTGGAAGTCCCATTTCAAATAGAAATCTCGTTTCTCAGGTTCTGTTAGGTCTTGATGAAGAATATAATGCCATTGTTGCAATGATACAAGGG
AGATCAAGTGTGTTGTGGGCTGAACTACAAGCAGAGCTTCTTGTGTTTGAAAAGTGA
Protein sequenceShow/hide protein sequence
MEKKLEEEEGNGEKEEERRKKEKKKVVGCRPPTTVVVDGCDGAWRRRKRAQQMTNISYTIPSMAVGTTTFSSPPLNQLLNQITTIKLDRGNFLLWKNLTMPILHSYKLEG
HLLGTKPCPPTYIRQEVATQVMGVENANDLWLAIEELFGVQSRVEEDFLRQTFQQTRKGNMKMTDYLRLMKNHADNLGLAGSPISNRNLVSQVLLGLDEEYNAIVAMIQG
RSSVLWAELQAELLVFEK