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Lag0012194 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012194
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCitrate synthase
Genome locationchr1:38540583..38541816
RNA-Seq ExpressionLag0012194
SyntenyLag0012194
Gene Ontology termsGO:0046912 - transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER56379.1 unnamed protein product [Striga asiatica]9.0e-1158.44Show/hide
Query:  PHLGSLGKRIKLALANNLMQN-PWT----------------DPIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTH
        PHL SLGKRIKLALAN+LM   P T                 P    RRNYEITPR PS S+G GPTIEPCSISG H
Subjt:  PHLGSLGKRIKLALANNLMQN-PWT----------------DPIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTH

KAF4395629.1 hypothetical protein F8388_008728 [Cannabis sativa]6.2e-0467.44Show/hide
Query:  PIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTHWLSALRLG
        P    RRNYEITPRT S S+GRGPTIEPCSIS   W  A+R+G
Subjt:  PIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTHWLSALRLG

KAF9624417.1 hypothetical protein IFM89_011342 [Coptis chinensis]6.2e-0485.19Show/hide
Query:  RNYEITPRTPSVSKGRGPTIEPCSISG
        +NYEITPRTPS S+G GPTIEPCSISG
Subjt:  RNYEITPRTPSVSKGRGPTIEPCSISG

KAG9455503.1 hypothetical protein H6P81_000011 [Aristolochia fimbriata]7.6e-1051.72Show/hide
Query:  LKALESAALLGFPHLGSLGKRIKLALANNLM---------------QNPWTDPIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTH
        ++ALESAALLG PHLGSLGKRIKLALAN+LM               +     P    RRNYEITP+     +G      PCSISGTH
Subjt:  LKALESAALLGFPHLGSLGKRIKLALANNLM---------------QNPWTDPIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTH

KAG9455509.1 hypothetical protein H6P81_000017 [Aristolochia fimbriata]3.7e-0488.46Show/hide
Query:  QNPWTDPIVSTRRNYEITPRTPSVSK
        +NPWTDPIVSTRRNYEITPRTPS S+
Subjt:  QNPWTDPIVSTRRNYEITPRTPSVSK

TrEMBL top hitse value%identityAlignment
A0A5A7RGV2 Uncharacterized protein4.3e-1158.44Show/hide
Query:  PHLGSLGKRIKLALANNLMQN-PWT----------------DPIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTH
        PHL SLGKRIKLALAN+LM   P T                 P    RRNYEITPR PS S+G GPTIEPCSISG H
Subjt:  PHLGSLGKRIKLALANNLMQN-PWT----------------DPIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTH

A0A6N2KHV9 Uncharacterized protein ycf688.8e-1261.54Show/hide
Query:  ALLGFPHLGSLGKRIKLALANNLMQNPWTDPIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTH
        AL  F  L   GKR          +NPWTDP    RRNYEI PRTPS S+GRGPTIEPCSISGTH
Subjt:  ALLGFPHLGSLGKRIKLALANNLMQNPWTDPIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTH

A0A7J6E4J1 Uncharacterized protein5.1e-0465.12Show/hide
Query:  PIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTHWLSALRLG
        P    R+NYEITPRTPS S+GR PTIEPCSIS   W  A+R+G
Subjt:  PIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTHWLSALRLG

A0A7J6HLS5 Citrate synthase3.0e-0467.44Show/hide
Query:  PIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTHWLSALRLG
        P    RRNYEITPRT S S+GRGPTIEPCSIS   W  A+R+G
Subjt:  PIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTHWLSALRLG

A0A7J6I3H7 Uncharacterized protein (Fragment)5.1e-0465.12Show/hide
Query:  PIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTHWLSALRLG
        P    R+NYEITPRTPS S+GR PTIEPCSIS   W  A+R+G
Subjt:  PIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTHWLSALRLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTAAATCCAAACTCTGTTTTGTTTGTTCAATAGCAGGTCGGTTCATAGTCGGGATCGTAACAGTATCGTCATTGAAAGCGTTGGAGTCGGCGGCTCTCTTAGGGTT
CCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCACTTGCGAACAACTTGATGCAAAATCCATGGACCGACCCCATCGTCTCCACCCGTAGGAACTACGAGATCA
CCCCAAGGACACCTTCGGTATCCAAGGGTCGCGGACCGACCATAGAACCCTGTTCAATAAGTGGAACGCATTGGCTGTCCGCTCTCCGGTTGGGCAGTAAGGGTCGGAGA
AGGGCAATCACTCATTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTAAATCCAAACTCTGTTTTGTTTGTTCAATAGCAGGTCGGTTCATAGTCGGGATCGTAACAGTATCGTCATTGAAAGCGTTGGAGTCGGCGGCTCTCTTAGGGTT
CCCTCATCTGGGATCCCTGGGGAAGAGGATCAAGTTGGCACTTGCGAACAACTTGATGCAAAATCCATGGACCGACCCCATCGTCTCCACCCGTAGGAACTACGAGATCA
CCCCAAGGACACCTTCGGTATCCAAGGGTCGCGGACCGACCATAGAACCCTGTTCAATAAGTGGAACGCATTGGCTGTCCGCTCTCCGGTTGGGCAGTAAGGGTCGGAGA
AGGGCAATCACTCATTCTTAA
Protein sequenceShow/hide protein sequence
MCKSKLCFVCSIAGRFIVGIVTVSSLKALESAALLGFPHLGSLGKRIKLALANNLMQNPWTDPIVSTRRNYEITPRTPSVSKGRGPTIEPCSISGTHWLSALRLGSKGRR
RAITHS