; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012239 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012239
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibose-5-phosphate isomerase
Genome locationchr1:38948856..38949161
RNA-Seq ExpressionLag0012239
SyntenyLag0012239
Gene Ontology termsGO:0009052 - pentose-phosphate shunt, non-oxidative branch (biological process)
GO:0004751 - ribose-5-phosphate isomerase activity (molecular function)
InterPro domainsIPR037171 - NagB/RpiA transferase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601846.1 putative ribose-5-phosphate isomerase 2, partial [Cucurbita argyrosperma subsp. sororia]3.1e-3180.43Show/hide
Query:  MAIPYFPKFMGSDKFA----LLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK
        MAIPY PKF+ SD  +    LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGLGTGST +HAV+RIG+LLRQGKLKDIVGIPTSKK
Subjt:  MAIPYFPKFMGSDKFA----LLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK

XP_004150857.1 probable ribose-5-phosphate isomerase 1 [Cucumis sativus]2.8e-3285.56Show/hide
Query:  MAIPYFPKFMGSD--KFALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK
        MAIPYFPKFMGSD     LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGLGTGST KHAV+RI ELLR GKLKDIVGIPTSKK
Subjt:  MAIPYFPKFMGSD--KFALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK

XP_008467140.1 PREDICTED: probable ribose-5-phosphate isomerase 1 [Cucumis melo]2.8e-3285.56Show/hide
Query:  MAIPYFPKFMGSD--KFALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK
        MAIPYFPKFMGSD     LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGLGTGST KHAV+RI ELLR GKLKDIVGIPTSKK
Subjt:  MAIPYFPKFMGSD--KFALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK

XP_022922027.1 probable ribose-5-phosphate isomerase 2 [Cucurbita moschata]3.1e-3180.43Show/hide
Query:  MAIPYFPKFMGSDKFA----LLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK
        MAIPY PKF+ SD  +    LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGLGTGST +HAV+RIG+LLRQGKLKDIVGIPTSKK
Subjt:  MAIPYFPKFMGSDKFA----LLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK

XP_038876015.1 probable ribose-5-phosphate isomerase 2 [Benincasa hispida]1.0e-3182.61Show/hide
Query:  MAIPYFPKFMGSDKFA----LLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK
        MAIPY PKFMGS+  +    LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGLGTGST KHAV+RI ELLRQGKLKDIVGIPTSKK
Subjt:  MAIPYFPKFMGSDKFA----LLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK

TrEMBL top hitse value%identityAlignment
A0A0A0KPL4 Ribose-5-phosphate isomerase1.3e-3285.56Show/hide
Query:  MAIPYFPKFMGSD--KFALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK
        MAIPYFPKFMGSD     LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGLGTGST KHAV+RI ELLR GKLKDIVGIPTSKK
Subjt:  MAIPYFPKFMGSD--KFALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK

A0A1S3CSU5 Ribose-5-phosphate isomerase1.3e-3285.56Show/hide
Query:  MAIPYFPKFMGSD--KFALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK
        MAIPYFPKFMGSD     LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGLGTGST KHAV+RI ELLR GKLKDIVGIPTSKK
Subjt:  MAIPYFPKFMGSD--KFALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK

A0A5A7TWN6 Ribose-5-phosphate isomerase1.3e-3285.56Show/hide
Query:  MAIPYFPKFMGSD--KFALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK
        MAIPYFPKFMGSD     LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGLGTGST KHAV+RI ELLR GKLKDIVGIPTSKK
Subjt:  MAIPYFPKFMGSD--KFALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK

A0A6J1E1Z2 Ribose-5-phosphate isomerase1.5e-3180.43Show/hide
Query:  MAIPYFPKFMGSDKFA----LLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK
        MAIPY PKF+ SD  +    LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGLGTGST +HAV+RIG+LLRQGKLKDIVGIPTSKK
Subjt:  MAIPYFPKFMGSDKFA----LLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK

A0A6J1JJ21 Ribose-5-phosphate isomerase1.5e-3180.43Show/hide
Query:  MAIPYFPKFMGSDKFA----LLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK
        MAIPY PKF+ SD  +    LL PSS PLSPPIFTQDDFKK AAYKAVEFV SGMVLGLGTGST +HAV+RIG+LLRQGKLKDIVGIPTSKK
Subjt:  MAIPYFPKFMGSDKFA----LLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK

SwissProt top hitse value%identityAlignment
B8FL28 Ribose-5-phosphate isomerase A1.9e-1260.71Show/hide
Query:  TQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTS
        +QD  KK AA KAVE+++SGMV+GLG+GST   A++ I  L+++GKLKDIVGIP+S
Subjt:  TQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTS

Q8I3W2 Ribose-5-phosphate isomerase2.1e-1163.64Show/hide
Query:  DDFKKVAAYKAV-EFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTS
        D  KK+ AYKAV E+VQS M +GLGTGSTV + + RI  LL+ GKLKD+V IPTS
Subjt:  DDFKKVAAYKAV-EFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTS

Q9C998 Probable ribose-5-phosphate isomerase 14.3e-2073.53Show/hide
Query:  VPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTS
        V S+ PLS    TQ++ KK+AAYKAVEFV+SGMV+GLGTGST KHAV RI ELLR+GKLKDI+GIPTS
Subjt:  VPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTS

Q9S726 Probable ribose-5-phosphate isomerase 3, chloroplastic4.6e-1467.24Show/hide
Query:  TQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK
        +QDD KK+AA KAVE ++ GMVLGLGTGST   AV++IG+LL  G+L DIVGIPTSK+
Subjt:  TQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK

Q9ZU38 Probable ribose-5-phosphate isomerase 23.4e-2562.89Show/hide
Query:  MAIPYFPKFMGSDK-FALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKKKARGSYSV
        MA+ Y P F+ SDK  +    +S+P  P   TQD+ K++AAYKAVEFV+SGMVLGLGTGST KHAV+RIGELLRQGKL++IVGIPTSKK    + S+
Subjt:  MAIPYFPKFMGSDK-FALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKKKARGSYSV

Arabidopsis top hitse value%identityAlignment
AT1G71100.1 Ribose 5-phosphate isomerase, type A protein3.1e-2173.53Show/hide
Query:  VPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTS
        V S+ PLS    TQ++ KK+AAYKAVEFV+SGMV+GLGTGST KHAV RI ELLR+GKLKDI+GIPTS
Subjt:  VPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTS

AT2G01290.1 ribose-5-phosphate isomerase 22.4e-2662.89Show/hide
Query:  MAIPYFPKFMGSDK-FALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKKKARGSYSV
        MA+ Y P F+ SDK  +    +S+P  P   TQD+ K++AAYKAVEFV+SGMVLGLGTGST KHAV+RIGELLRQGKL++IVGIPTSKK    + S+
Subjt:  MAIPYFPKFMGSDK-FALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKKKARGSYSV

AT3G04790.1 Ribose 5-phosphate isomerase, type A protein3.3e-1567.24Show/hide
Query:  TQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK
        +QDD KK+AA KAVE ++ GMVLGLGTGST   AV++IG+LL  G+L DIVGIPTSK+
Subjt:  TQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKK

AT5G44520.1 NagB/RpiA/CoA transferase-like superfamily protein1.8e-0532.39Show/hide
Query:  PSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKKKA
        P    LSP +       + A +    +V+SGM++GLG+G     A+  +G+ L  G L ++VG+P S + A
Subjt:  PSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKKKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTCCTTATTTCCCCAAATTCATGGGGTCGGACAAATTCGCCCTTCTTGTTCCTTCTTCTACGCCTCTCTCTCCCCCCATTTTCACTCAGGACGATTTCAAGAA
GGTCGCGGCCTACAAAGCCGTCGAATTCGTTCAATCCGGTATGGTTCTAGGGCTCGGAACCGGCTCCACGGTCAAGCACGCGGTCAACCGGATCGGCGAGCTTCTCCGCC
AGGGCAAGCTCAAGGACATCGTTGGAATACCGACCTCCAAAAAGAAAGCCAGGGGAAGCTACTCGGTCTGTTTTAAAAAAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATTCCTTATTTCCCCAAATTCATGGGGTCGGACAAATTCGCCCTTCTTGTTCCTTCTTCTACGCCTCTCTCTCCCCCCATTTTCACTCAGGACGATTTCAAGAA
GGTCGCGGCCTACAAAGCCGTCGAATTCGTTCAATCCGGTATGGTTCTAGGGCTCGGAACCGGCTCCACGGTCAAGCACGCGGTCAACCGGATCGGCGAGCTTCTCCGCC
AGGGCAAGCTCAAGGACATCGTTGGAATACCGACCTCCAAAAAGAAAGCCAGGGGAAGCTACTCGGTCTGTTTTAAAAAAAAATAG
Protein sequenceShow/hide protein sequence
MAIPYFPKFMGSDKFALLVPSSTPLSPPIFTQDDFKKVAAYKAVEFVQSGMVLGLGTGSTVKHAVNRIGELLRQGKLKDIVGIPTSKKKARGSYSVCFKKK