; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012263 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012263
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionHigh mobility group B protein 6
Genome locationchr1:39222819..39223601
RNA-Seq ExpressionLag0012263
SyntenyLag0012263
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025412.1 high mobility group B protein 6 [Cucumis melo var. makuwa]3.1e-8085.71Show/hide
Query:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL + + +PLKSGRRPLQPKNSLPNPVP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

XP_004142680.1 high mobility group B protein 6 [Cucumis sativus]4.0e-8086.22Show/hide
Query:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL   + LPLKSGRRPLQPKNSLPNPVP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

XP_008463266.1 PREDICTED: high mobility group B protein 6 [Cucumis melo]4.5e-7985.2Show/hide
Query:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL + + +PLKSGRRPLQPKNSLPN VP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

XP_022978293.1 high mobility group B protein 13-like [Cucurbita maxima]5.8e-7983.67Show/hide
Query:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQALH PLA    LPLKSGRRPLQPKNSLPNPVPAVAK++KSKPERI+ISL  DANKEN PPIH+ A +   +ESCD SLADELNAVKRKLERLRL+ ER
Subjt:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+ML+ERD + ELRMKELLQRS+ QRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

XP_038883293.1 uncharacterized protein LOC120074285 [Benincasa hispida]4.6e-8488.83Show/hide
Query:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTAT-RIESCDSSLADELNAVKRKLERLRLDAE
        MQ LHHPLA  Q LPLKSGRRPLQPKNSLPN  P+VAK +KSKPERI+ISLSGDANKEN PPIH+TATT T  IESCDSSLADELNAVKRKLERLRLD E
Subjt:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTAT-RIESCDSSLADELNAVKRKLERLRLDAE

Query:  RTEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        RTE+MLRERD V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDS+ FVTGF
Subjt:  RTEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

TrEMBL top hitse value%identityAlignment
A0A0A0L063 Uncharacterized protein2.0e-8086.22Show/hide
Query:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL   + LPLKSGRRPLQPKNSLPNPVP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

A0A1S3CJ78 high mobility group B protein 62.2e-7985.2Show/hide
Query:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL + + +PLKSGRRPLQPKNSLPN VP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

A0A5A7SJQ2 High mobility group B protein 61.5e-8085.71Show/hide
Query:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL + + +PLKSGRRPLQPKNSLPNPVP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

A0A5D3CEI7 High mobility group B protein 62.2e-7985.2Show/hide
Query:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQ LHHPL + + +PLKSGRRPLQPKNSLPN VP+VAKI+KSKPE I+ISLSGDANKEN PP      T   IESCD SLADELNAVKRK+ERLRLD ER
Subjt:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+MLRERD V ELRMKELLQRSQ QRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

A0A6J1ISM0 high mobility group B protein 13-like2.8e-7983.67Show/hide
Query:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER
        MQALH PLA    LPLKSGRRPLQPKNSLPNPVPAVAK++KSKPERI+ISL  DANKEN PPIH+ A +   +ESCD SLADELNAVKRKLERLRL+ ER
Subjt:  MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAER

Query:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF
        TE+ML+ERD + ELRMKELLQRS+ QRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEESVGENSSLDSSEFVTGF
Subjt:  TEEMLRERDRVFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01910.1 unknown protein5.4e-2242.07Show/hide
Query:  SGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAERTEEMLRERDRVFELRMK
        SGR+ LQP+N    P      +     E+++ +L+ +                    S D+SLA+EL+A K+KLERLR D E TE++L+ERD   +L M 
Subjt:  SGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAERTEEMLRERDRVFELRMK

Query:  ELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESV
         LLQR + Q+ LE++VDRLFRLKEL +Y  +ISPIRSLR KE+++      F   E  D E SV
Subjt:  ELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESV

AT5G01910.2 unknown protein2.7e-2143.45Show/hide
Query:  SGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAERTEEMLRERDRVFELRMK
        SGR+ LQP+N    P      +     E+++ +L+ +                    S D+SLA+EL+A K+KLERLR D E TE++L+ERD   +L M 
Subjt:  SGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAERTEEMLRERDRVFELRMK

Query:  ELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREK
         LLQR + Q+ LE++VDRLFRLKEL +Y  +ISPIRSLR KE+++
Subjt:  ELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCCCTTCACCATCCCTTAGCCGCGTCTCAATATCTTCCTCTCAAGTCCGGCCGCCGCCCGCTCCAACCGAAGAATTCGTTGCCCAATCCCGTACCTGCCGTCGC
CAAAATCGTCAAATCCAAGCCGGAACGGATCGAGATCTCGCTCTCCGGCGACGCCAATAAGGAGAACCAACCGCCGATTCACTCGACGGCGACAACGGCGACGAGGATTG
AATCGTGTGATTCGTCTCTGGCGGATGAACTCAATGCGGTCAAGAGGAAGCTCGAGAGATTGAGATTGGACGCTGAACGAACGGAGGAGATGCTGAGAGAGAGGGATAGG
GTGTTCGAGTTGCGGATGAAGGAGCTTTTGCAGAGAAGTCAGGTGCAGAGAGATCTGGAGATGGAAGTCGATAGGTTATTCAGATTGAAGGAACTCAGATCGTACTGTAT
GAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAGGAGCGAGAAAAGATATTCACCGACGCACAATTTCCGGAATTTGAAATCGGCGACGGAGAAGAATCGGTTGGCGAAA
ATTCATCGTTGGATTCTTCAGAATTCGTCACAGGTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGCCCTTCACCATCCCTTAGCCGCGTCTCAATATCTTCCTCTCAAGTCCGGCCGCCGCCCGCTCCAACCGAAGAATTCGTTGCCCAATCCCGTACCTGCCGTCGC
CAAAATCGTCAAATCCAAGCCGGAACGGATCGAGATCTCGCTCTCCGGCGACGCCAATAAGGAGAACCAACCGCCGATTCACTCGACGGCGACAACGGCGACGAGGATTG
AATCGTGTGATTCGTCTCTGGCGGATGAACTCAATGCGGTCAAGAGGAAGCTCGAGAGATTGAGATTGGACGCTGAACGAACGGAGGAGATGCTGAGAGAGAGGGATAGG
GTGTTCGAGTTGCGGATGAAGGAGCTTTTGCAGAGAAGTCAGGTGCAGAGAGATCTGGAGATGGAAGTCGATAGGTTATTCAGATTGAAGGAACTCAGATCGTACTGTAT
GAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAGGAGCGAGAAAAGATATTCACCGACGCACAATTTCCGGAATTTGAAATCGGCGACGGAGAAGAATCGGTTGGCGAAA
ATTCATCGTTGGATTCTTCAGAATTCGTCACAGGTTTTTGA
Protein sequenceShow/hide protein sequence
MQALHHPLAASQYLPLKSGRRPLQPKNSLPNPVPAVAKIVKSKPERIEISLSGDANKENQPPIHSTATTATRIESCDSSLADELNAVKRKLERLRLDAERTEEMLRERDR
VFELRMKELLQRSQVQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSSEFVTGF