; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0012274 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0012274
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr1:39333735..39336887
RNA-Seq ExpressionLag0012274
SyntenyLag0012274
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145060.1 uncharacterized protein LOC111014578 [Momordica charantia]1.6e-1527.23Show/hide
Query:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN
        F+W+ F+ C+P+   L KRGID  P C  C  + ET DHAL  C+ +K++ + + P+        N+  D ++ L + L    F+   +  W +WNDRN 
Subjt:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN

Query:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQ--SVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEEASL
              I D   R +WI  Y  +++ +   S+ D   Q+  +++    +          + +   AA +      G+G V  +  GQ +AA      AS 
Subjt:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQ--SVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEEASL

Query:  SVLATEVKAIVEG
          L  E  A+ +G
Subjt:  SVLATEVKAIVEG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]9.7e-1628.5Show/hide
Query:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGN-NFADRIICLAKGLQMESFERTCITFWTLWNDRN
        FIW++ H  +PT   L  RGI   PAC  C  + E++ HA   C+ ++QI   +FP L       N +F +    L + L+ +      IT W +WNDRN
Subjt:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGN-NFADRIICLAKGLQMESFERTCITFWTLWNDRN

Query:  NFVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEEASLS
        + ++   +     +CEW+  +   +   Q+ +     + ++NH  V         V++  L T AA R +      G ++ D+    VAA  +     LS
Subjt:  NFVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEEASLS

Query:  VLATEVKAIVEGLR
         L  E++ I+EGL+
Subjt:  VLATEVKAIVEGLR

XP_030502714.1 uncharacterized protein LOC115717884 [Cannabis sativa]3.4e-1324.25Show/hide
Query:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN
        F+W+     +P    L+ R I   P C  CK   ETV HAL GC   ++   +       H     +  D ++C  + L  +         W LWN RNN
Subjt:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN

Query:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAM---------E
        ++++  +M  +   +W  +Y+ +Y   Q  I       +   S+V DG S     + + ++T AA+    +    G VV+DN G   A +          
Subjt:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAM---------E

Query:  LFEEAS---------------LSVLATEVKAIVEGLRECNGRADLLAKHALDHRNSMLWIGNVILDHL
        +  EA                + +L T+ K IV+ L  CN  A  L    +  +N + +  N+ ++H+
Subjt:  LFEEAS---------------LSVLATEVKAIVEGLRECNGRADLLAKHALDHRNSMLWIGNVILDHL

XP_030505962.1 uncharacterized protein LOC115720894 [Cannabis sativa]1.2e-1325.81Show/hide
Query:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN
        F+WKAFH  +PT   L    I    AC  C   WE++ HAL  C+ +K++  +    LD  +     F+D ++ L+        E+   T W LW DRNN
Subjt:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN

Query:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQ-----VAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEE
        +++  P++  S+       Y+  ++   ++          N  ++  GA+   +     +  + +   AA   S    G+G +V ++ GQ VAA      
Subjt:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQ-----VAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEE

Query:  ASLSVLATEVKAIVEGL
                E KA++ GL
Subjt:  ASLSVLATEVKAIVEGL

XP_030509046.1 uncharacterized protein LOC115723707 [Cannabis sativa]1.5e-1330.56Show/hide
Query:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN
        F WK     LP    L KR +     C  CK  WE++ HAL  C+ +K I  N   ++D H  +G    D +I LA  +  E+FE      W++WNDRN 
Subjt:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN

Query:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQ--METNH
        F++     D      +  +Y  +Y+  + +     QQ   + NH
Subjt:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQ--METNH

TrEMBL top hitse value%identityAlignment
A0A6J1CTE3 uncharacterized protein LOC1110145788.0e-1627.23Show/hide
Query:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN
        F+W+ F+ C+P+   L KRGID  P C  C  + ET DHAL  C+ +K++ + + P+        N+  D ++ L + L    F+   +  W +WNDRN 
Subjt:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN

Query:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQ--SVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEEASL
              I D   R +WI  Y  +++ +   S+ D   Q+  +++    +          + +   AA +      G+G V  +  GQ +AA      AS 
Subjt:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQ--SVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEEASL

Query:  SVLATEVKAIVEG
          L  E  A+ +G
Subjt:  SVLATEVKAIVEG

A0A6J1DX30 uncharacterized protein LOC1110248744.7e-1628.5Show/hide
Query:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGN-NFADRIICLAKGLQMESFERTCITFWTLWNDRN
        FIW++ H  +PT   L  RGI   PAC  C  + E++ HA   C+ ++QI   +FP L       N +F +    L + L+ +      IT W +WNDRN
Subjt:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGN-NFADRIICLAKGLQMESFERTCITFWTLWNDRN

Query:  NFVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEEASLS
        + ++   +     +CEW+  +   +   Q+ +     + ++NH  V         V++  L T AA R +      G ++ D+    VAA  +     LS
Subjt:  NFVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEEASLS

Query:  VLATEVKAIVEGLR
         L  E++ I+EGL+
Subjt:  VLATEVKAIVEGLR

A0A803NI87 Uncharacterized protein5.7e-1425.81Show/hide
Query:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN
        F+WKAFH  +PT   L    I    AC  C   WE++ HAL  C+ +K++  +    LD  +     F+D ++ L+        E+   T W LW DRNN
Subjt:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN

Query:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQ-----VAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEE
        +++  P++  S+       Y+  ++   ++          N  ++  GA+   +     +  + +   AA   S    G+G +V ++ GQ VAA      
Subjt:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQ-----VAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEE

Query:  ASLSVLATEVKAIVEGL
                E KA++ GL
Subjt:  ASLSVLATEVKAIVEGL

A0A803PGT3 Uncharacterized protein9.8e-1429.03Show/hide
Query:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICD-----NMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLW
        F+W+  H  LP++  L KRGI +   C  C  + ET+ HAL  C   K +       ++FPR    I    +  D  I +      E FE      W +W
Subjt:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICD-----NMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLW

Query:  NDRNNFVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEE
        N RN  ++     D      W  DY +    +    DI  +  +TNH   G  +          +   A V  +LKG G+ AV+ D  G+ VAA   F+ 
Subjt:  NDRNNFVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEE

Query:  ASLSVLATEVKAIVEGL
          +SV+  E+ A+  GL
Subjt:  ASLSVLATEVKAIVEGL

A0A803Q6Y1 Uncharacterized protein7.5e-1430.56Show/hide
Query:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN
        F WK     LP    L KR +     C  CK  WE++ HAL  C+ +K I  N   ++D H  +G    D +I LA  +  E+FE      W++WNDRN 
Subjt:  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNN

Query:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQ--METNH
        F++     D      +  +Y  +Y+  + +     QQ   + NH
Subjt:  FVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQ--METNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTATATCCACTCTTTACACTATACATACCACTCGAACAATAGTGCCAGATCCATTTATTTGGAAAGCTTTCCATGGTTGTTTACCTACTCGGTATGGTCTATGG
AAGCGTGGCATTGACATCTATCCTGCATGTCAAAGTTGTAAAGTCAAATGGGAGACTGTTGACCATGCTTTGTGTGGTTGCAGGGGGTCCAAACAGATATGTGAT
AACATGTTTCCTCGACTGGATGCCCATATTCCGGTGGGTAATAATTTTGCAGATCGTATCATCTGTCTTGCTAAGGGCCTTCAAATGGAATCTTTTGAACGGACC
TGTATTACTTTTTGGACCTTATGGAATGATAGAAATAATTTTGTTTATAACGTTCCTATTATGGATTGGTCAAAAAGGTGTGAGTGGATATATGATTATTGGTCG
GAATACAAGCCAAAGCAGTCTGTTATTGACATAATGGGACAGCAGATGGAGACAAATCACTCGCTGGTGGGCGATGGGGCGTCCTTCGGGGAGCAGGTTGCGATG
GTTTCTTTATTTACATATGCTGCGGTTCGACCATCGTTGAAAGGTGCAGGTATGGGAGCTGTTGTCCTTGATAATTGTGGACAAACTGTAGCAGCAATGGAACTC
TTTGAGGAAGCTTCACTCTCGGTCCTGGCCACTGAAGTTAAGGCAATCGTTGAAGGTTTGAGAGAATGCAACGGACGGGCTGATCTGCTGGCCAAGCATGCTCTG
GATCACCGAAATTCTATGTTATGGATTGGAAATGTGATTTTGGACCACCTCAATGCACAAGGAACTGACGAGGACAACCGGGCAGAAATCAGACTGAAAGATGGA
TCCAAGAGGCGAAACCGGCGAGTGGGACGGACCAAGACCGAAGGGTTCGGGCAGGGCTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCCAAGGCCGAGGCATGGC
CGAGGCCGGCCACCCGCTCGCGCGGGCCGAGCCCATTCGGCTCTGTTTGGTCCCCACCGCCTCTTGCTACCCCGGTTTCGCCTGGTTTATCCCGAAACGCCTCCG
AATACTTAA
mRNA sequenceShow/hide mRNA sequence
CTTATATCCACTCTTTACACTATACATACCACTCGAACAATAGTGCCAGATCCATTTATTTGGAAAGCTTTCCATGGTTGTTTACCTACTCGGTATGGTCTATGG
AAGCGTGGCATTGACATCTATCCTGCATGTCAAAGTTGTAAAGTCAAATGGGAGACTGTTGACCATGCTTTGTGTGGTTGCAGGGGGTCCAAACAGATATGTGAT
AACATGTTTCCTCGACTGGATGCCCATATTCCGGTGGGTAATAATTTTGCAGATCGTATCATCTGTCTTGCTAAGGGCCTTCAAATGGAATCTTTTGAACGGACC
TGTATTACTTTTTGGACCTTATGGAATGATAGAAATAATTTTGTTTATAACGTTCCTATTATGGATTGGTCAAAAAGGTGTGAGTGGATATATGATTATTGGTCG
GAATACAAGCCAAAGCAGTCTGTTATTGACATAATGGGACAGCAGATGGAGACAAATCACTCGCTGGTGGGCGATGGGGCGTCCTTCGGGGAGCAGGTTGCGATG
GTTTCTTTATTTACATATGCTGCGGTTCGACCATCGTTGAAAGGTGCAGGTATGGGAGCTGTTGTCCTTGATAATTGTGGACAAACTGTAGCAGCAATGGAACTC
TTTGAGGAAGCTTCACTCTCGGTCCTGGCCACTGAAGTTAAGGCAATCGTTGAAGGTTTGAGAGAATGCAACGGACGGGCTGATCTGCTGGCCAAGCATGCTCTG
GATCACCGAAATTCTATGTTATGGATTGGAAATGTGATTTTGGACCACCTCAATGCACAAGGAACTGACGAGGACAACCGGGCAGAAATCAGACTGAAAGATGGA
TCCAAGAGGCGAAACCGGCGAGTGGGACGGACCAAGACCGAAGGGTTCGGGCAGGGCTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCCAAGGCCGAGGCATGGC
CGAGGCCGGCCACCCGCTCGCGCGGGCCGAGCCCATTCGGCTCTGTTTGGTCCCCACCGCCTCTTGCTACCCCGGTTTCGCCTGGTTTATCCCGAAACGCCTCCG
AATACTTAA
Protein sequenceShow/hide protein sequence
LISTLYTIHTTRTIVPDPFIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERT
CITFWTLWNDRNNFVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMEL
FEEASLSVLATEVKAIVEGLRECNGRADLLAKHALDHRNSMLWIGNVILDHLNAQGTDEDNRAEIRLKDGSKRRNRRVGRTKTEGFGQGFWPDPLLGLGPRPRHG
RGRPPARAGRAHSALFGPHRLLLPRFRLVYPETPPNT